Nucleotide Global Alignment
Description
- Query:
- TRCN0000475181
- Subject:
- XM_006519506.3
- Aligned Length:
- 2184
- Identities:
- 1712
- Gaps:
- 165
Alignment
Query 1 ATGGAGGGCTCACGTCCCCGCGCCCCGAGCGGCCACTTAGCGCCGTCGCCGCCGGCTTTCGACGGCGAGCTGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCTGCAGCGATACTCCAACGGGCCAGCCGTGAGCGCAGGGTCGCTCGGGATGGGAGCGGTGAGCTGGTCTGAGA 148
||||||||.|||.|.||||||||||
Sbjct 1 -------------------------------------------------ATGGGAGCAGTGGGTTGGTCTGAGA 25
Query 149 GTCGTGCAGGCGAACGGCGCTTCCCCTGCCCTGTATGCGGGAAGCGCTTCCGCTTCAACTCTATCCTTGCTTTG 222
.||||||||||||||||||||||||.||.|||||.|||||.|||||||||||.|||||.||.|||.|.||||||
Sbjct 26 CTCGTGCAGGCGAACGGCGCTTCCCTTGTCCTGTGTGCGGAAAGCGCTTCCGATTCAATTCCATCTTGGCTTTG 99
Query 223 CACCTGCGGGCGCACCCAGGAGCCCAGGCCTTCCAGTGCCCTCACTGCGGCCACCGCGCGGCGCAGCGGGCTCT 296
||||||.|.||.|||||.||.|||||.||||||||||||||.||.||||||||||||||.||||||||||||||
Sbjct 100 CACCTGAGAGCCCACCCGGGCGCCCAAGCCTTCCAGTGCCCACATTGCGGCCACCGCGCAGCGCAGCGGGCTCT 173
Query 297 GCTGCGCTCGCACCTGCGCACACACCAGCCCGAGCGCCCACGTAGTCCTGCTGCACGCCTGTTGCTGGAGTTGG 370
|||||||||.|||||.||.||.||||||||.|||||.|||||.||.|||||||||||.||||||||||||||||
Sbjct 174 GCTGCGCTCACACCTCCGAACGCACCAGCCGGAGCGTCCACGCAGCCCTGCTGCACGGCTGTTGCTGGAGTTGG 247
Query 371 AAGAGCGCGCGCTACTACGCGAGGCCCGACTGGGGAGAGCCCGAAGCTCAGGGGGCATGCAGGCCACCCCTGCC 444
|.||.|||||.||.||.|||||.||||||||.|||||||||.||||||||||.|||||||||.|||.|||||||
Sbjct 248 AGGAACGCGCCCTGCTTCGCGAAGCCCGACTCGGGAGAGCCAGAAGCTCAGGCGGCATGCAGTCCAGCCCTGCC 321
Query 445 ACTGAGGGTCTGGCGCGGCCCCAGGCTCCTTCATCGTCCGCCTTCCGTTGCCCCTACTGCAAAGGCAAGTTTCG 518
.|.|||||.|||||.||.||.||||..|||||.||.||.||||||||||||||.|.||||||||||||||||||
Sbjct 322 GCAGAGGGCCTGGCTCGCCCTCAGGTCCCTTCCTCATCTGCCTTCCGTTGCCCTTTCTGCAAAGGCAAGTTTCG 395
Query 519 CACCTCGGCGGAGCGCGAACGCCACCTGCACATCCTGCATAGGCCCTGGAAGTGCGGCCTGTGCAGTTTCGGCT 592
||||||.||||||||.||||||||||||||.||||||||.|||||||||||||||.||.||||||||||.||||
Sbjct 396 CACCTCAGCGGAGCGGGAACGCCACCTGCATATCCTGCACAGGCCCTGGAAGTGCAGCTTGTGCAGTTTTGGCT 469
Query 593 CCAGCCAGGAGGAGGAGCTGCTGCACCACAGCCTGACGGCCCACGGGGCTCCCGAGCGTCCCCTGGCGGCCACC 666
|||||||||||||||||.|||||||||||||.||||||||||||||||||.|||||||.|||||||||||.||.
Sbjct 470 CCAGCCAGGAGGAGGAGTTGCTGCACCACAGTCTGACGGCCCACGGGGCTTCCGAGCGCCCCCTGGCGGCTACA 543
Query 667 TCCGCTGCGCCTCCGCCTCAGCCTCAGCCTCCACCCCAGCCCGAACCCAGATCAGTTCCCC---AGCCGGAGCC 737
| ||.|||||.|.||.|.||||||||||||||..||||||||||| |.||| ||||.|||||
Sbjct 544 T---------CTACGCCTGAACCCCCGCCTCCACCCCAGCAAGAACCCAGATC---TGCCCTTGAGCCTGAGCC 605
Query 738 GGA------------GCCGGAGCCCGAACGTGAGGCAACCCCGACCCCAGCTCCTGCCGCTCCCGAGGAGCCCC 799
.|| |||.|||||.||.||.|||||||.|||..|||||.|||||||..||||.||||||||||
Sbjct 606 TGAGCCTGAACCTAGGCCAGAGCCTGACCGGGAGGCAAACCCTGCCCCAACTCCTGCACCTCCGGAGGAGCCCC 679
Query 800 CAGCGCCTCCGGAGTTCCGCTGCCAAGTGTGCGGCCAGAGCTTTACACAGTCTTGGTTTCTCAAGGGCCACATG 873
|.|||||.||.||.|||||.|||||.||||||||||||||||||||||||||.||||||||||||||.||||||
Sbjct 680 CTGCGCCACCTGAATTCCGTTGCCAGGTGTGCGGCCAGAGCTTTACACAGTCCTGGTTTCTCAAGGGTCACATG 753
Query 874 CGTAAGCACAAGGCCTCCTTCGATCATGCGTGTCCGGTGTGCGGCCGCTGCTTCAAGGAGCCCTGGTTCCTTAA 947
||.|||||||||||||||||.|||||||||||.||.||.||.||.|||||||||||||||||||||||||||||
Sbjct 754 CGCAAGCACAAGGCCTCCTTTGATCATGCGTGCCCCGTATGTGGTCGCTGCTTCAAGGAGCCCTGGTTCCTTAA 827
Query 948 GAACCACATGAAGGTGCACGCCAGCAAGCTGGGCCCACTGCGTGCCCCGGGGCCTGCCTCCGGGCCTGCCCGCG 1021
|||||||||||||||||||.|||||||||||||.||..|||||||.||.||.||||.|||.|..||||||.|.|
Sbjct 828 GAACCACATGAAGGTGCACACCAGCAAGCTGGGTCCTTTGCGTGCTCCAGGCCCTGGCTCTGCACCTGCCAGGG 901
Query 1022 CCCCCCAGCCTCCTGACCTCGGCCTGCTGGCCTATGAGCCGTTGGGCCCAGCGCTCCTCTTGGCCCCGGCTCCC 1095
||||.||||||||.|||||..||||.|||||.||||||||..|||||||.||.||||||.|||||||.||.|||
Sbjct 902 CCCCTCAGCCTCCCGACCTGAGCCTACTGGCATATGAGCCACTGGGCCCTGCACTCCTCCTGGCCCCAGCACCC 975
Query 1096 ACCCCGGCCGAGCGCCGTGAGCCCCCGAGCCTCTTGGGCTACCTGAGCCTGCGAGCTGGCGAGGGCCGGCCCAA 1169
.|.|||||.||||||||.||||||||.||||||||.|||||||||||..|.||||||||.||.|..||.|||||
Sbjct 976 GCTCCGGCTGAGCGCCGAGAGCCCCCAAGCCTCTTAGGCTACCTGAGTGTACGAGCTGGGGAAGTACGACCCAA 1049
Query 1170 CGGCGAGGGTGCTGAGCCC----GGTCCCGGCCGCAGCTTCGGAGGCTTCCGCCCGCTGTCCTCTGCTCTCCCG 1239
.||.||||||||||| ||| ||| |||||.||||..|||||.||||||||.|||.|.||.|||||.||.
Sbjct 1050 TGGTGAGGGTGCTGA-CCCTGGAGGT---GGCCGAAGCTATGGAGGGTTCCGCCCACTGCCTTCAGCTCTTCCC 1119
Query 1240 GCCCGGGCTCGCCGGCACCGTGCGGAGGAGCCTGAGGAAGAAGAGGAGGTGGTGGAGGCCGAGGAGGAAACCTG 1313
..|||||||||.||.||||||.|.|||||.||.||.||.|||||.||.|||||||||||.||.|||||.|.|||
Sbjct 1120 AACCGGGCTCGGCGACACCGTACAGAGGAACCAGAAGAGGAAGAAGAAGTGGTGGAGGCTGAAGAGGAGAGCTG 1193
Query 1314 GGCCCGGGGCAGGTCGCTGGGCTCTCTGGCTTCCCTGCACCCGCGCCCGGGTGAGGGACCGGGGCACTCTGCCT 1387
||||||.|||||||||||||||||||||.|||||||||||||...|||.||||||||..|.||.||..||||..
Sbjct 1194 GGCCCGAGGCAGGTCGCTGGGCTCTCTGACTTCCCTGCACCCCAACCCAGGTGAGGGGTCAGGACAGCCTGCAC 1267
Query 1388 CTGCTGCTGGGGCCCAGGCAAGATCGACCGCCACGCAGGAAGAGAATGGGCTGTTGGTTGGAGGGACCCGGCCT 1461
||||.||.|||.|||||||.|||||.||.|||||.||.|||||.||.||||||.|||||||||||||.||..||
Sbjct 1268 CTGCCGCGGGGACCCAGGCGAGATCCACGGCCACCCAAGAAGAAAACGGGCTGCTGGTTGGAGGGACACGATCT 1341
Query 1462 GAAGGGGGCCGGGGCGCCACCGGCAAGGATTGTCCTTTCTGCGGAAAATCTTTCCGCTCAGCACATCACCTCAA 1535
||||.||||||.||.|||||.||||||||.||.||.|||||.|||||||||||||||||.||.||||||.|.||
Sbjct 1342 GAAGCGGGCCGTGGGGCCACTGGCAAGGACTGCCCCTTCTGTGGAAAATCTTTCCGCTCGGCGCATCACTTAAA 1415
Query 1536 AGTGCATCTGCGAGTGCACACAGGCGAGCGGCCCTACAAGTGTCCGCACTGCGACTACGCGGGCACCCAGTCCG 1609
|||||||||.||.|||||||||||.|||||.||||||||||||||.|||||||||||.||.||.||||||||.|
Sbjct 1416 AGTGCATCTCCGTGTGCACACAGGTGAGCGTCCCTACAAGTGTCCACACTGCGACTATGCAGGTACCCAGTCGG 1489
Query 1610 GCTCGCTCAAGTATCACCTACAGCGCCACCACCGGGAGCAGAGGAGCGGGGCCGGCCCCGGGCCACCCCCGGAG 1683
|||||||||||||||||||.|||||.||||||||.||||||||||||.|.||.||.||.|||||.|||||.||.
Sbjct 1490 GCTCGCTCAAGTATCACCTTCAGCGTCACCACCGAGAGCAGAGGAGCAGTGCGGGTCCTGGGCCTCCCCCAGAA 1563
Query 1684 CCACCGCCTCCTTCCCAGCGGGGTTC---GGCCCCGCAATCTGGAGCCAAGCCGTCTCCGCAGCCT--GCGACC 1752
||.|||||.||||||||||||||.|| |...|||||.||.|||||||||||..|||.| |||| ||.|||
Sbjct 1564 CCCCCGCCACCTTCCCAGCGGGGCTCACTGCAGCCGCAGTCAGGAGCCAAGCCAACTCAG--GCCTCAGCCACC 1635
Query 1753 TGGGTGGAGGGCGCCTCAAGTCCCCGGCCTCCTTCTAGCGGTGCTGGGCCGGGGTCCCGTCGGAAGCCCGCCAG 1826
|||||.||||||.|..|||||.|||||||||||||.|||.|..|.||.||.|||||||||.|||||||.||.||
Sbjct 1636 TGGGTAGAGGGCACTGCAAGTACCCGGCCTCCTTCGAGCAGCACCGGACCAGGGTCCCGTAGGAAGCCTGCTAG 1709
Query 1827 CCCTGGGAGGACCCTGCGCAACGGGCGAGGCGGTGAGGCCGAACCCCTGGACCTGTCCTTGCGGGCAGGGCCGG 1900
||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||.|.|||||.||.||||
Sbjct 1710 CCCTGGGAGGACCCTGCGAAACGGGCGAGGTGGTGAAGCCGAACCCCTGGACCTGTCCCTACGGGCGGGCCCGG 1783
Query 1901 GAGGCGAGGCCGGGCCTGGGGGTGCCCTCCACCGCTGCCTCTTCTGCCCGTTCGCCACTGGAGCCCCAGAGCTC 1974
||||.|||||||||.|.|||||||||||.||||||||||||||||||||.||.|||||||||||.||.||||||
Sbjct 1784 GAGGTGAGGCCGGGGCAGGGGGTGCCCTTCACCGCTGCCTCTTCTGCCCCTTTGCCACTGGAGCTCCTGAGCTC 1857
Query 1975 ATGGCCTTGCACCTTCAAGTGCACCACAGCCGCCGGGCTAGGGGCCGCCGGCCACCCCAGGCTGACGCGTCCCC 2048
|||||||||||.||.|||||.|||||.|||||.||.|||.||||||||||||..||||..||.|||.||||.||
Sbjct 1858 ATGGCCTTGCATCTGCAAGTACACCATAGCCGTCGTGCTCGGGGCCGCCGGCAGCCCCGAGCCGACACGTCTCC 1931
Query 2049 GCCCTATGCCCGAGTACCATCAGGAGAGACCCCTCCCAGTCCTTCGCAGGAAGGGGAGGAGGGCTCCGGGCTGT 2122
..||||||.|||.|.||||||||||||||||||||||||||||.|.|..||||.|||||...||.|.|||||||
Sbjct 1932 AACCTATGTCCGGGCACCATCAGGAGAGACCCCTCCCAGTCCTCCACTAGAAGAGGAGGGCAGCCCAGGGCTGT 2005
Query 2123 CCAGACCCGGAGAGGCAGGGCTGGGGGGGCAAGAACGG 2160
|.|||.|||||||||||||.||.|||||||||||||||
Sbjct 2006 CTAGATCCGGAGAGGCAGGTCTTGGGGGGCAAGAACGG 2043