Nucleotide Global Alignment
Description
- Query:
- TRCN0000475184
- Subject:
- XM_006510940.3
- Aligned Length:
- 3729
- Identities:
- 1122
- Gaps:
- 2439
Alignment
Query 1 ATGGCGGTGGCCGAGCTGTACACGCAGTACAACAGGGTCTGGATTCCCGATCCTGAAGAAGTTTGGAAGTCTGC 74
|||||||||||||||||.|||.||||||||||||||||.|||||.||.||||||||.||||||||||||||.||
Sbjct 1 ATGGCGGTGGCCGAGCTCTACGCGCAGTACAACAGGGTTTGGATCCCAGATCCTGAGGAAGTTTGGAAGTCGGC 74
Query 75 TGAAATAGCCAAGGACTACAGAGTTGGTGACAAGGTCCTGCGACTCCTGCTGGAGGATGGAACGGAGCTGGATT 148
||||||.||.|||||||||||||..||||||...|||||..||||.||||||||||||||.|.|||||||||.|
Sbjct 75 TGAAATCGCAAAGGACTACAGAGCGGGTGACCGAGTCCTCAGACTTCTGCTGGAGGATGGCATGGAGCTGGAAT 148
Query 149 ATTCTGTCAATCCAGAATCTCTGCCTCCACTTCGGAATCCTGACATCCTCGTGGGCGAGAATGACCTCACGGCT 222
|..||||..|.||||..||.||||||||.||||||||.|||||||||||.|||||.||||||||||||||.||.
Sbjct 149 ACCCTGTTGACCCAGGGTCACTGCCTCCGCTTCGGAACCCTGACATCCTGGTGGGTGAGAATGACCTCACAGCC 222
Query 223 CTCAGCTATCTTCACGAGCCCGCGGTGCTCCACAACCTCAGAATCCGCTTTGCAGAATCCAAACTCATTTACAC 296
||||||||.||.||.||||||||.|||||.||.||.||||||||||||||.|||||.|||||||||||.|||||
Sbjct 223 CTCAGCTACCTCCATGAGCCCGCAGTGCTGCATAATCTCAGAATCCGCTTCGCAGAGTCCAAACTCATCTACAC 296
Query 297 CTACAGTGGAATCATTTTGGTGGCCATGAATCCTTACAAGCAGTTGCCAATATACGGAGATGCCATCATCCACG 370
|||||||||||||||||||||||||||||||||||||||.|||.|.|||||||||||.||||||||||||||||
Sbjct 297 CTACAGTGGAATCATTTTGGTGGCCATGAATCCTTACAAACAGCTACCAATATACGGGGATGCCATCATCCACG 370
Query 371 CCTACAGCGGGCAGAACATGGGCGATATGGACCCACACATATTTGCCGTGGCAGAAGAGGCATACAAGCAGATG 444
||||||||||.|||||||||||.||.||||||||||||||.|||||.||.|||||.|||||.||||||||||||
Sbjct 371 CCTACAGCGGACAGAACATGGGTGACATGGACCCACACATCTTTGCGGTTGCAGAGGAGGCCTACAAGCAGATG 444
Query 445 GCCAGAAACAACAGAAACCAGTCCATAATTGTAAGTGGGGAGTCAGGTGCTGGAAAGACAGTGTCGGCTCGCTA 518
|||||.|||||.|||||.|||||||||||.||.|||||.||.|||||.||.||.|||||.||.||.||.|||||
Sbjct 445 GCCAGGAACAATAGAAATCAGTCCATAATCGTGAGTGGAGAATCAGGAGCCGGGAAGACTGTCTCTGCACGCTA 518
Query 519 TGCCATGAGGTACTTTGCCACCGTCAGCAAATCGGGCAGCAACGCTCACGTGGAAGACAAGGTCCTGGCATCCA 592
|||||||||||||||.||.|||||||||||||||.|||||||.||.||.|||||.|||||.|||.|||||||||
Sbjct 519 TGCCATGAGGTACTTCGCTACCGTCAGCAAATCGAGCAGCAATGCCCATGTGGAGGACAAAGTCTTGGCATCCA 592
Query 593 ATCCCATCACCGAGGCCGTTGGAAATGCCAAGACCACCCGCAATGACAATAGTAGTCGGTTTGGGAAATACACA 666
|||||||.||.|||||.||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||
Sbjct 593 ATCCCATAACTGAGGCTGTTGGAAATGCCAAGACCACCCGCAATGACAACAGCAGTCGGTTTGGGAAATACACA 666
Query 667 GAAATCAGTTTTGATGAACAAAATCAAATTATAGGAGCCAACATGAGCACTTACCTCCTGGAGAAATCCAGAGT 740
||.|||||.||||||||...|||.||.||.||.||.|||||.|||||.|||||||||||||||||.||||||||
Sbjct 667 GAGATCAGCTTTGATGAGAGAAACCAGATCATTGGCGCCAATATGAGAACTTACCTCCTGGAGAAGTCCAGAGT 740
Query 741 TGTCTTTCAATCGGAAAATGAACGAAATTACCACATTTTCTATCAGCTTTGTGCATCTGCACAGCAGTCGGAAT 814
|||||||||.||.|||||||||||.|||||||||||.|||||.||||||||||||||.|||||||||||.||||
Sbjct 741 TGTCTTTCAGTCAGAAAATGAACGGAATTACCACATCTTCTACCAGCTTTGTGCATCCGCACAGCAGTCAGAAT 814
Query 815 TTAAACATCTTAAATTGGGGAGTGCCGAAGAATTTAATTATACAAGAATGGGAGGCAATACTGTCATTGAGGGT 888
|||||||.||||||.||||||||||.|||||.||.||.||.||||||||||||||.||.|||||||||||.|||
Sbjct 815 TTAAACACCTTAAACTGGGGAGTGCGGAAGAGTTCAACTACACAAGAATGGGAGGTAACACTGTCATTGAAGGT 888
Query 889 GTGAATGATCGAGCTGAAATGGTAGAGACTCAAAAGACCTTCACGCTTCTGGGTTTCAAGGAGGATTTTCAGAT 962
||.|||||..|||||||.|||||.|||||.||.|||||||||||.||.|||||.||||||.|.||||||||.||
Sbjct 889 GTCAATGACAGAGCTGACATGGTGGAGACCCAGAAGACCTTCACACTACTGGGATTCAAGAAAGATTTTCAAAT 962
Query 963 GGACGTTTTTAAAATCCTGGCAGCCATCCTACATCTGGGCAACGTGCAGATCACCGCGGTGGGCAACGAGAGGT 1036
|||.||||||||.|||||.||.||||||||.||.||||||||.||||||.|||||.||||||||||||||||||
Sbjct 963 GGATGTTTTTAAGATCCTAGCTGCCATCCTGCACCTGGGCAATGTGCAGGTCACCACGGTGGGCAACGAGAGGT 1036
Query 1037 CCTCAGTTAGTGAGGATGACAGTCACCTGAAGGTGTTCTGTGAGCTCCTGGGCCTGGAGAGTGGCAGAGTTGCT 1110
|.|||||.|||||||||||||||||||||||||||||||||||||||.||||||||||||...|||.|||.|||
Sbjct 1037 CTTCAGTCAGTGAGGATGACAGTCACCTGAAGGTGTTCTGTGAGCTCTTGGGCCTGGAGACCAGCAAAGTGGCT 1110
Query 1111 CAGTGGCTGTGCAATCGCAAAATCGTCACAAGCTCTGAGACGGTGGTAAAACCCATGACCAGGCCTCAGGCTGT 1184
||||||||||||||..|.|||||.||.||...|||.||.||.||||||||.||||||||||||||||||||..|
Sbjct 1111 CAGTGGCTGTGCAACAGAAAAATTGTGACCTCCTCGGAAACTGTGGTAAAGCCCATGACCAGGCCTCAGGCCAT 1184
Query 1185 CAACGCCAGGGATGCACTGGCCAAAAAGATCTATGCTCACCTGTTCGACTTCATTGTGGAGAGAATTAACCAAG 1258
|||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||.|||..|||.|||||.|
Sbjct 1185 CAACGCCAGGGATGCGCTGGCCAAAAAGATCTACGCTCACCTGTTCGACTTCATTGTCGAGCAAATCAACCAGG 1258
Query 1259 CGTTGCAGTTTTCA----------------------------------------GTTTTGAAACCTTTGATG-- 1290
|||||||.||.||| |||||||.||||||||||
Sbjct 1259 CGTTGCACTTCTCAGGCAAGCAGCACACTTTTATTGGTGTTTTGGACATTTATGGTTTTGAGACCTTTGATGTA 1332
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1333 AACAGCTTTGAACAGTTCTGCATCAATTACGCTAATGAAAAACTACAGCAGCAGTTTAACCTGCACGTCTTTAA 1406
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1407 ACTTGAGCAAGAGGAATACATGAAAGAGGACATCCCCTGGACTCTGATAGACTTCTATGACAACCAGCCTGTTA 1480
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1481 TTGACCTGATCGAGGCAAAAATGGGCATTTTGGAGTTGCTGGATGAAGAATGCTTGTTGCCTCATGGCACCGAT 1554
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1555 GAAAACTGGCTTCAAAAGCTGTATAACAATTTTGTCAACAAGAACTCGTTATTCGAGAAGCCTAGAATGTCAAA 1628
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1629 CTCATCCTTCATCATCCAACATTTTGCTGACAAGGTGGAGTACCAATGTGAAGGGTTCCTGGAGAAGAACAGAG 1702
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1703 ACACTGTCTATGACATGCTGGTGGAGATCCTCAGAGCAAGCAAGTTTCATCTCTGTGCCGCCTTTTTTCAAGAA 1776
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1777 AGCCCTGTTCCGTCTTCTCCCTTTGGGGCGATGATCACAGTTAAATCTGCAAAGCAGGTCATCAAGCCGAACAC 1850
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1851 CAAGCACTTCCGGACCACTGTTGGGAACAAGTTCCGCAGCTCTCTGTACTTGCTCATGGAAACCCTCAATGCCA 1924
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1925 CCACACCCCACTACGTCCGTTGCATCAAGCCAAATGATGAGAAAATGCCCTTTGAGTTTGACTCCAAGCGGATT 1998
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1999 GTCCAGCAGCTGCGAGCCTGTGGCGTTTTAGAAACGATTCGCATCAGTGCCCAGAGCTACCCTTCCAGGTGGAC 2072
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2073 ATACCTCGAGTTCTATAGTCGCTATGGCATCCTCATGACCCAGCAGGAGCTGTCCCTCAGTGATAAGAAGGAGG 2146
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2147 TGTGCAAGGTGGTTCTGCACAGGCTCATCCAGGATTCTAACCAGTACCAGTTTGGTAGAACCAAAATTTTCTTC 2220
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2221 AGAGCAGGACAAGTGGCTTACTTAGAGAAACTCCGCCTGGATAAACTGAGACAGGATTGTATTATGATCCAGAA 2294
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2295 ACACGTGCGAGGCTGGCTGCAGAGGAGGAAGTTCCTCAGGGAGAGACAGGCTGCCCTGACAATCCAACGGTACT 2368
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2369 TCCGGGGTCAGCAGACAGTGAGGAAGGCCATCACTGCCACTGCTTTGAAGGAGGCCTGGGCGGCCATCATCCTC 2442
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2443 CAGAAGTATTGCCGAGGCTACCTGGTCCGTAACCTGTACCAGCTGATCCGTGTGGCCACCATCACCATCCAGGC 2516
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2517 ACACACCAGGGGCTTCCTAGCCAGGAGGCGGTACCGGAAGTTGTTGCAGGAGCACAAGGCAGTGATCCTGCAGA 2590
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2591 AGTATGCGAGGGCCTGGCTGGCCCGGCGCAGATTCCAGAACATCCGCAGGTTCGTGCTCAACATTCAGCTGACT 2664
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2665 TACAGGGTCCAGCGCTTGCAGAAGAAGCTGGAGGATCAGAACAGAGAGAACCACGGGCTGGTGGAGAAGCTGAC 2738
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2739 CAGCCTGGCCGCTCTGCGGGTTGGCGATCTGGAAAAGGTTCAGAAGCTGGAAGCAGAGCTGGAAAAGGCAGCTA 2812
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2813 CCCACCGGCACAGCTATGAAGAGAAGGGCCGCAGATACAGGGACACAGTGGAGGAGAGGTTGTCAAAGCTGCAG 2886
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2887 AAGCACAATGCAGAGCTGGAGCTGCAGAGAGAGCGAGCAGAGCAGATGCTGCAAGAGAAGTCTGAGGAGCTAAA 2960
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2961 AGAAAAAATGGACAAGCTCACCAGGCAGCTGTTTGATGATGTGCAGAAAGAAGAACAGCAAAGACTAGTTCTTG 3034
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3035 AAAAAGGTTTTGAGCTGAAAACACAAGCCTATGAGAAACAGATAGAGTCTCTGAGAGAAGAGATTAAAGCCCTC 3108
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3109 AAGGACGAGAGGTCGCAACTGCATCACCAGCTGGAGGAGGGACAGGTCACCTCTGACCGCCTGAAGGGGGAGGT 3182
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3183 GGCCCGCCTAAGCAAGCAGGCAAAGACCATCTCTGAGTTTGAGAAGGAGATAGAGCTGCTGCAAGCCCAGAAGA 3256
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3257 TAGATGTGGAAAAGCACGTGCAGTCACAGAAACGGGAGATGAGAGAACGGATGTCAGAGGTCACCAAGCAGCTT 3330
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3331 TTGGAGAGCTATGACATCGAAGATGTTAGAAGCAGGCTCTCTGTGGAAGATCTGGAACATTTAAATGAAGATGG 3404
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3405 AGAACTTTGGTTTGCCTACGAAGGACTAAAGAAAGCAACTCGAGTTCTGGAGAGCCATTTCCAGTCTCAGAAGG 3478
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3479 ATTGCTATGAAAAAGAGATTGAAGGTCTGAACTTCAAAGTCGTGCACCTGAGCCAAGAGATCAACCACCTGCAG 3552
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3553 AAGCTGTTCAGAGAAGAGACAGACATCAACGAAAGTATCCGGCATGAAGTCACCAGGCTGACATCAGAAAACAT 3626
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3627 GATGATCCCAGACTTTAAGCAGCAGATTTCAGAGCTGGAGAGGCAGAAGCAGGATCTTGAATCCCGCCTGAAGG 3700
Query 1291 ----------------------------- 1290
Sbjct 3701 AGCAGGCTGAGAAGATAGAAGGTTTCTCA 3729
