Nucleotide Global Alignment
Description
- Query:
- TRCN0000475184
- Subject:
- XR_001778836.1
- Aligned Length:
- 3648
- Identities:
- 1122
- Gaps:
- 2358
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGAACTTGGGCGGGACCCCTGGAGGTTTCTTTGACCTGTTACCTGGACCGGGCCAATGGCAACGCGGGCTGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCAAGCACCAATCCCGCTGCTAACCCTCACCCCGCCACCAACCCCAGTCCGGGCGCCAGAGCCCTCGGGGGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGAGCCGTGGCACTCGGGAAAACTTCTGCACAAGATGGCCAGGCGCTGAGTGCCTGGGCGCGCACAGTCCCCT 222
Query 1 ---------------------------ATGGCGGTGGCCGAGCTGTACACGCAGTACAACAGGGTCTGGATTCC 47
|||||||||||||||||.|||.||||||||||||||||.|||||.||
Sbjct 223 GCAGCAACAGCAGCAGAGAGGAGGTCCATGGCGGTGGCCGAGCTCTACGCGCAGTACAACAGGGTTTGGATCCC 296
Query 48 CGATCCTGAAGAAGTTTGGAAGTCTGCTGAAATAGCCAAGGACTACAGAGTTGGTGACAAGGTCCTGCGACTCC 121
.||||||||.||||||||||||||.||||||||.||.|||||||||||||..||||||...|||||..||||.|
Sbjct 297 AGATCCTGAGGAAGTTTGGAAGTCGGCTGAAATCGCAAAGGACTACAGAGCGGGTGACCGAGTCCTCAGACTTC 370
Query 122 TGCTGGAGGATGGAACGGAGCTGGATTATTCTGTCAATCCAGAATCTCTGCCTCCACTTCGGAATCCTGACATC 195
|||||||||||||.|.|||||||||.||..||||..|.||||..||.||||||||.||||||||.|||||||||
Sbjct 371 TGCTGGAGGATGGCATGGAGCTGGAATACCCTGTTGACCCAGGGTCACTGCCTCCGCTTCGGAACCCTGACATC 444
Query 196 CTCGTGGGCGAGAATGACCTCACGGCTCTCAGCTATCTTCACGAGCCCGCGGTGCTCCACAACCTCAGAATCCG 269
||.|||||.||||||||||||||.||.||||||||.||.||.||||||||.|||||.||.||.|||||||||||
Sbjct 445 CTGGTGGGTGAGAATGACCTCACAGCCCTCAGCTACCTCCATGAGCCCGCAGTGCTGCATAATCTCAGAATCCG 518
Query 270 CTTTGCAGAATCCAAACTCATTTACACCTACAGTGGAATCATTTTGGTGGCCATGAATCCTTACAAGCAGTTGC 343
|||.|||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||.|.|
Sbjct 519 CTTCGCAGAGTCCAAACTCATCTACACCTACAGTGGAATCATTTTGGTGGCCATGAATCCTTACAAACAGCTAC 592
Query 344 CAATATACGGAGATGCCATCATCCACGCCTACAGCGGGCAGAACATGGGCGATATGGACCCACACATATTTGCC 417
||||||||||.||||||||||||||||||||||||||.|||||||||||.||.||||||||||||||.|||||.
Sbjct 593 CAATATACGGGGATGCCATCATCCACGCCTACAGCGGACAGAACATGGGTGACATGGACCCACACATCTTTGCG 666
Query 418 GTGGCAGAAGAGGCATACAAGCAGATGGCCAGAAACAACAGAAACCAGTCCATAATTGTAAGTGGGGAGTCAGG 491
||.|||||.|||||.|||||||||||||||||.|||||.|||||.|||||||||||.||.|||||.||.|||||
Sbjct 667 GTTGCAGAGGAGGCCTACAAGCAGATGGCCAGGAACAATAGAAATCAGTCCATAATCGTGAGTGGAGAATCAGG 740
Query 492 TGCTGGAAAGACAGTGTCGGCTCGCTATGCCATGAGGTACTTTGCCACCGTCAGCAAATCGGGCAGCAACGCTC 565
.||.||.|||||.||.||.||.||||||||||||||||||||.||.|||||||||||||||.|||||||.||.|
Sbjct 741 AGCCGGGAAGACTGTCTCTGCACGCTATGCCATGAGGTACTTCGCTACCGTCAGCAAATCGAGCAGCAATGCCC 814
Query 566 ACGTGGAAGACAAGGTCCTGGCATCCAATCCCATCACCGAGGCCGTTGGAAATGCCAAGACCACCCGCAATGAC 639
|.|||||.|||||.|||.||||||||||||||||.||.|||||.||||||||||||||||||||||||||||||
Sbjct 815 ATGTGGAGGACAAAGTCTTGGCATCCAATCCCATAACTGAGGCTGTTGGAAATGCCAAGACCACCCGCAATGAC 888
Query 640 AATAGTAGTCGGTTTGGGAAATACACAGAAATCAGTTTTGATGAACAAAATCAAATTATAGGAGCCAACATGAG 713
||.||.|||||||||||||||||||||||.|||||.||||||||...|||.||.||.||.||.|||||.|||||
Sbjct 889 AACAGCAGTCGGTTTGGGAAATACACAGAGATCAGCTTTGATGAGAGAAACCAGATCATTGGCGCCAATATGAG 962
Query 714 CACTTACCTCCTGGAGAAATCCAGAGTTGTCTTTCAATCGGAAAATGAACGAAATTACCACATTTTCTATCAGC 787
.|||||||||||||||||.|||||||||||||||||.||.|||||||||||.|||||||||||.|||||.||||
Sbjct 963 AACTTACCTCCTGGAGAAGTCCAGAGTTGTCTTTCAGTCAGAAAATGAACGGAATTACCACATCTTCTACCAGC 1036
Query 788 TTTGTGCATCTGCACAGCAGTCGGAATTTAAACATCTTAAATTGGGGAGTGCCGAAGAATTTAATTATACAAGA 861
||||||||||.|||||||||||.|||||||||||.||||||.||||||||||.|||||.||.||.||.||||||
Sbjct 1037 TTTGTGCATCCGCACAGCAGTCAGAATTTAAACACCTTAAACTGGGGAGTGCGGAAGAGTTCAACTACACAAGA 1110
Query 862 ATGGGAGGCAATACTGTCATTGAGGGTGTGAATGATCGAGCTGAAATGGTAGAGACTCAAAAGACCTTCACGCT 935
||||||||.||.|||||||||||.|||||.|||||..|||||||.|||||.|||||.||.|||||||||||.||
Sbjct 1111 ATGGGAGGTAACACTGTCATTGAAGGTGTCAATGACAGAGCTGACATGGTGGAGACCCAGAAGACCTTCACACT 1184
Query 936 TCTGGGTTTCAAGGAGGATTTTCAGATGGACGTTTTTAAAATCCTGGCAGCCATCCTACATCTGGGCAACGTGC 1009
.|||||.||||||.|.||||||||.|||||.||||||||.|||||.||.||||||||.||.||||||||.||||
Sbjct 1185 ACTGGGATTCAAGAAAGATTTTCAAATGGATGTTTTTAAGATCCTAGCTGCCATCCTGCACCTGGGCAATGTGC 1258
Query 1010 AGATCACCGCGGTGGGCAACGAGAGGTCCTCAGTTAGTGAGGATGACAGTCACCTGAAGGTGTTCTGTGAGCTC 1083
||.|||||.|||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGGTCACCACGGTGGGCAACGAGAGGTCTTCAGTCAGTGAGGATGACAGTCACCTGAAGGTGTTCTGTGAGCTC 1332
Query 1084 CTGGGCCTGGAGAGTGGCAGAGTTGCTCAGTGGCTGTGCAATCGCAAAATCGTCACAAGCTCTGAGACGGTGGT 1157
.||||||||||||...|||.|||.|||||||||||||||||..|.|||||.||.||...|||.||.||.|||||
Sbjct 1333 TTGGGCCTGGAGACCAGCAAAGTGGCTCAGTGGCTGTGCAACAGAAAAATTGTGACCTCCTCGGAAACTGTGGT 1406
Query 1158 AAAACCCATGACCAGGCCTCAGGCTGTCAACGCCAGGGATGCACTGGCCAAAAAGATCTATGCTCACCTGTTCG 1231
|||.||||||||||||||||||||..||||||||||||||||.|||||||||||||||||.|||||||||||||
Sbjct 1407 AAAGCCCATGACCAGGCCTCAGGCCATCAACGCCAGGGATGCGCTGGCCAAAAAGATCTACGCTCACCTGTTCG 1480
Query 1232 ACTTCATTGTGGAGAGAATTAACCAAGCGTTGCAGTTTTCA--------------------------------- 1272
||||||||||.|||..|||.|||||.||||||||.||.|||
Sbjct 1481 ACTTCATTGTCGAGCAAATCAACCAGGCGTTGCACTTCTCAGGCAAGCAGCACACTTTTATTGGTGTTTTGGAC 1554
Query 1273 -------GTTTTGAAACCTTTGATG------------------------------------------------- 1290
|||||||.||||||||||
Sbjct 1555 ATTTATGGTTTTGAGACCTTTGATGTAAACAGCTTTGAACAGTTCTGCATCAATTACGCTAATGAAAAACTACA 1628
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1629 GCAGCAGTTTAACCTGCACGTCTTTAAACTTGAGCAAGAGGAATACATGAAAGAGGACATCCCCTGGACTCTGA 1702
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1703 TAGACTTCTATGACAACCAGCCTGTTATTGACCTGATCGAGGCAAAAATGGGCATTTTGGAGTTGCTGGATGAA 1776
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1777 GAATGCTTGTTGCCTCATGGCACCGATGAAAACTGGCTTCAAAAGCTGTATAACAATTTTGTCAACAAGAACTC 1850
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1851 GTTATTCGAGAAGCCTAGAATGTCAAACTCATCCTTCATCATCCAACATTTTGCTGACAAGGTGGAGTACCAAT 1924
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1925 GTGAAGGGTTCCTGGAGAAGAACAGAGACACTGTCTATGACATGCTGGTGGAGATCCTCAGAGCAAGCAAGTTT 1998
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1999 CATCTCTGTGCCGCCTTTTTTCAAGAAAGCCCTGTTCCGTCTTCTCCCTTTGGGGCGATGATCACAGTTAAATC 2072
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2073 TGCAAAGCAGGTCATCAAGCCGAACACCAAGCACTTCCGGACCACTGTTGGGAACAAGTTCCGCAGCTCTCTGT 2146
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2147 ACTTGCTCATGGAAACCCTCAATGCCACCACACCCCACTACGTCCGTTGCATCAAGCCAAATGATGAGAAAATG 2220
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2221 CCCTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTTAGAAACGATTCGCATCAG 2294
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2295 TGCCCAGAGCTACCCTTCCAGGTGGACATACCTCGAGTTCTATAGTCGCTATGGCATCCTCATGACCCAGCAGG 2368
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2369 AGCTGTCCCTCAGTGATAAGAAGGAGGTGTGCAAGGTGGTTCTGCACAGGCTCATCCAGGATTCTAACCAGTAC 2442
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2443 CAGTTTGGTAGAACCAAAATTTTCTTCAGAGCAGGACAAGTGGCTTACTTAGAGAAACTCCGCCTGGATAAACT 2516
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2517 GAGACAGGATTGTATTATGATCCAGAAACACGTGCGAGGCTGGCTGCAGAGGAGGAAGTTCCTCAGGGAGAGAC 2590
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2591 AGGCTGCCCTGACAATCCAACGGTACTTCCGGGGTCAGCAGACAGTGAGGAAGGCCATCACTGCCACTGCTTTG 2664
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2665 AAGGAGGCCTGGGCGGCCATCATCCTCCAGAAGTATTGCCGAGGCTACCTGGTCCGTAACCTGTACCAGCTGAT 2738
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2739 CCGTGTGGCCACCATCACCATCCAGGCACACACCAGGGGCTTCCTAGCCAGGAGGCGGTACCGGAAGTTGTTGC 2812
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2813 AGGAGCACAAGGCAGTGATCCTGCAGAAGTATGCGAGGGCCTGGCTGGCCCGGCGCAGATTCCAGAACATCCGC 2886
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2887 AGGTTCGTGCTCAACATTCAGCTGACTTACAGGGTCCAGCGCTTGCAGAAGAAGCTGGAGGATCAGAGAGAACC 2960
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2961 ACGGGCTGGTGGAGAAGCTGACCAGCCTGGCCGCTCTGCGGGTTGGCGATCTGGAAAAGGTTCAGAAGCTGGAA 3034
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3035 GCAGAGCTGGAAAAGGCAGCTACCCACCGGCACAGCTATGAAGAGAAGGGCCGCAGATACAGGGACACAGTGGA 3108
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3109 GGAGAGGTTGTCAAAGCTGCAGAAGCACAATGCAGAGCTGGAGCTGCAGAGAGAGCGAGCAGAGCAGATGCTGC 3182
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3183 AAGAGAAGTCTGAGGAGCTAAAAGAAAAAATGGACAAGCTCACCAGGCAGCTGTTTGATGATGTGCAGAAAGAA 3256
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3257 GAACAGCAAAGACTAGTTCTTGAAAAAGGTTTTGAGCTGAAAACACAAGCCTATGAGAAACAGATAGAGTCTCT 3330
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3331 GAGAGAAGAGATTAAAGCCCTCAAGGACGAGAGGTCGCAACTGCATCACCAGCTGGAGGAGGGACAGGTCACCT 3404
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3405 CTGACCGCCTGAAGGGGGAGGTGGCCCGCCTAAGCAAGCAGGCAAAGACCATCTCTGAGTTTGAGAAGGAGATA 3478
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3479 GAGCTGCTGCAAGCCCAGAAGATAGATGTGGAAAAGCACGTGCAGTCACAGAAACGGGAGATGAGAGAACGGAT 3552
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3553 GTCAGAGGTCACCAAGCAGCTTTTGGAGAGCTATGACATCGAAGATGTTAGAAGCAGGCTCTCTGTGGAAGATC 3626
Query 1291 ---------------------- 1290
Sbjct 3627 TGGAACATTTAAATGAAGATGG 3648
