Nucleotide Global Alignment

Description

Query:
TRCN0000475189
Subject:
XM_006529359.1
Aligned Length:
1614
Identities:
1073
Gaps:
441

Alignment

Query    1  ATGAACCTCGAGTTGCTGGAGTCCTTTGGGCAGAACTATCCAGAGGAAGCTGATGGAACTTTGGATTGTATCAG  74
            |||||||||||||||||||||||||||||.||||||||.|||||||||||||||||.|||.||||.||.|||||
Sbjct    1  ATGAACCTCGAGTTGCTGGAGTCCTTTGGACAGAACTACCCAGAGGAAGCTGATGGGACTCTGGACTGCATCAG  74

Query   75  CATGGCTTTGACTTGCACCTTTAACAGGTGGGGCACACTGCTTGCAGTTGGCTGTAATGATGGCCGAATTGTCA  148
            ||||||..||||.||||||||||||||||||||||||||||||||.|||||||||||.||||||||.|||||.|
Sbjct   75  CATGGCCCTGACCTGCACCTTTAACAGGTGGGGCACACTGCTTGCTGTTGGCTGTAACGATGGCCGGATTGTTA  148

Query  149  TCTGGGATTTCTTGACAAGAGGCATTGCTAAAATAATTAGTGCACACATCCATCCAGTGTGTTCTTTATGCTGG  222
            |.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||.||.|||
Sbjct  149  TTTGGGATTTCTTGACCAGAGGCATTGCTAAAATAATTAGTGCACACATCCATCCAGTCTGTTCTTTGTGTTGG  222

Query  223  AGCCGAGATGGTCATAAACTCGTGAGTGCTTCCACTGATAACATAGTGTCACAGTGGGATGTTCTTTCAGGCGA  296
            |||||||||||||||||.||.|||||||||||.||.|||||||||||||||||||||||||||||||||||.||
Sbjct  223  AGCCGAGATGGTCATAAGCTTGTGAGTGCTTCTACAGATAACATAGTGTCACAGTGGGATGTTCTTTCAGGAGA  296

Query  297  CTGTGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCCACGAGATCAGAACAAGGTTC  370
            .||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct  297  TTGCGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCCTCGAGATCAGAACAAGGTTC  370

Query  371  TCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCCAGTGGAC  444
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||
Sbjct  371  TCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCCGGTAGAC  444

Query  445  GATGACTCCGATTTGAACGTTGTGGCATCTTTTGATAGGCGAGGGGAATATATTTATACGGGAAACGCAAAAGG  518
            ||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||.|||||.||||||||
Sbjct  445  GATGACTCGGATTTGAACGTGGTGGCATCTTTTGATAGGCGAGGGGAATATATTTATACAGGAAATGCAAAAGG  518

Query  519  CAAGATTTTGGTCCTAAAAACAGATTCTCAGGATCTTGTTGCTTCCTTCAGAGTGACAACTGGAACAAGCAATA  592
            ||||||.|||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.||||||||||
Sbjct  519  CAAGATCTTGGTCCTAAAAACAGACTCTCAGGATCTTGTTGCTTCCTTCAGAGTAACAACTGGGACAAGCAATA  592

Query  593  CCACAGCCATTAAGTCAATTGAGTTTGCCCGGAAGGGGAGTTGCTTTTTAATTAACACGGCAGATCGAATAATC  666
            |.||.||||||||.||||||||||||||||||||||||||||||||..|.||||||||.||||||||||||||.
Sbjct  593  CTACCGCCATTAAATCAATTGAGTTTGCCCGGAAGGGGAGTTGCTTCCTGATTAACACAGCAGATCGAATAATA  666

Query  667  AGAGTTTATGATGGCAGAGAAATCTTAACATGTGGAAGAGATGGAGAGCCTGAACCTATGCAGAAATTGCAGGA  740
            |||||.|||||.||||||||.||.|||||.||||||||.|||||||||||.||.|||||||||||..|||||||
Sbjct  667  AGAGTCTATGACGGCAGAGAGATTTTAACGTGTGGAAGGGATGGAGAGCCAGAGCCTATGCAGAAGCTGCAGGA  740

Query  741  TTTGGTGAATAGGACCCCATGGAAGAAATGTTGTTTCTCTGGGGATGGGGAATACATCGTGGCAGGTTCTGCCC  814
            .||||||||||||||.||||||||.||||||||||||||||||||||||||.|||||.|||||.||.|||||..
Sbjct  741  CTTGGTGAATAGGACTCCATGGAAAAAATGTTGTTTCTCTGGGGATGGGGAGTACATAGTGGCGGGCTCTGCGA  814

Query  815  GGCAGCATGCCCTGTACATCTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTCTCCATGGGACGAGAGGAGAA  888
            ||||||||||.|||||.||||||||.||||||||||||||||||||||||||..|.||||||||.|||||.|||
Sbjct  815  GGCAGCATGCGCTGTATATCTGGGAAAAGAGCATTGGCAACCTGGTGAAGATCTTACATGGGACCAGAGGGGAA  888

Query  889  CTCCTCTTGGATGTAGCTTGGCATCCTGTTCGACCCATCATAGCATCCATTTCCAGTGGAGTGGTATCTATCTG  962
            |||||..||||.||.|||||||||||.||.||||||||||||||.||.||.||.|||||||||||.||.||.||
Sbjct  889  CTCCTGCTGGACGTGGCTTGGCATCCAGTCCGACCCATCATAGCTTCTATCTCTAGTGGAGTGGTGTCCATTTG  962

Query  963  GGCACAGAATCAAGTAGAAAACTGGAGTGCATTTGCACCAGACTTCAAAGAATTGGATGAAAATGTAGAATACG  1036
            |||.||.||||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||.|
Sbjct  963  GGCCCAAAATCAAGTAGAAAATTGGAGTGCATTTGCACCAGACTTCAAAGAGTTGGATGAAAATGTAGAATATG  1036

Query 1037  AAGAAAGGGAATCAGAGTTTGATATTGAAGATGAAGATAAGAGTGAGCCTGAGCAGACAGGGGCTGATGCTGCA  1110
            |.|||||.||||||||.|||||||||||.||||||||||||||||||||||||||.|||||||||||||||||.
Sbjct 1037  AGGAAAGAGAATCAGAATTTGATATTGAGGATGAAGATAAGAGTGAGCCTGAGCAAACAGGGGCTGATGCTGCT  1110

Query 1111  GAAGATGAGGAAGTGGATGTCACCAGCGTGGACCCTATTGCTGCCTTCTGTAGCAGTGATGAAGAGCTGGAAGA  1184
            ||||||||||||||||||||||||||||||||.||.||.||||||||||||||||     |||||.|.      
Sbjct 1111  GAAGATGAGGAAGTGGATGTCACCAGCGTGGATCCCATCGCTGCCTTCTGTAGCA-----GAAGACCC------  1173

Query 1185  TTCAAAGGCTCTATTGTATTTACCCATTGCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTTACGGCCCCCCAC  1258
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1259  CGGATGCAGTCCAAACCTCCTTGATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAGTCCTCAGCAGATGGG  1332
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1333  TCCCAGCCACCTAAGAAGAAACCCAAAACAACCAATATAGAACTTCAAGGAGTACCAAATGATGAAGTCCATCC  1406
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1407  ACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGGTAAAG  1480
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1481  AGAAAGATTCTCCATTTAAACCGAAACTCTACAAAGGGGACAGAGGTTTACCTCTGGAAGGATCAGCGAAGGGT  1554
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1555  AAAGTGCAGGCGGAACTCAGCCAGCCCTTGACAGCAGGAGGAGCAATCTCAGAACTGTTA  1614
                                                                        
Sbjct 1174  ------------------------------------------------------------  1173

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