Nucleotide Global Alignment
Description
- Query:
- TRCN0000475250
- Subject:
- XM_017006486.2
- Aligned Length:
- 3625
- Identities:
- 2120
- Gaps:
- 1487
Alignment
Query 1 ATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG 74
Query 75 GTGCACAATGGAGGAGCTCCGCTCCCTCATGGAGCTGCGGGGCACTGAGGCTGTGGTCAAGATCAAGGAGACTT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTGCACAATGGAGGAGCTCCGCTCCCTCATGGAGCTGCGGGGCACTGAGGCTGTGGTCAAGATCAAGGAGACTT 148
Query 149 ATGGGGACACCGAAGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTGCCGGGCACCGCTCCAGAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGGGGACACCGAAGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTGCCGGGCACCGCTCCAGAC 222
Query 223 CTGGAAAAGAGAAAGCAAATTTTTGGGCAAAACTTTATACCTCCAAAGAAGCCAAAAACCTTCCTGCAGCTCGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGGAAAAGAGAAAGCAAATTTTTGGGCAAAACTTTATACCTCCAAAGAAGCCAAAAACCTTCCTGCAGCTCGT 296
Query 297 GTGGGAGGCGCTGCAGGACGTGACGCTCATCATCCTGGAGATTGCCGCCATCATCTCCCTGGGGCTGTCCTTCT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGGGAGGCGCTGCAGGACGTGACGCTCATCATCCTGGAGATTGCCGCCATCATCTCCCTGGGGCTGTCCTTCT 370
Query 371 ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGATGAAGGAGAGGCAGAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGATGAAGGAGAGGCAGAG 444
Query 445 GCAGGTTGGATCGAGGGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTCCTGGTCACGGCCTTCAATGACTG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCAGGTTGGATCGAGGGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTCCTGGTCACGGCCTTCAATGACTG 518
Query 519 GAGCAAAGAGAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTACCGTGGTCCGGGCTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGCAAAGAGAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTACCGTGGTCCGGGCTG 592
Query 593 GCCAGGTGGTGCAGATCCCTGTGGCTGAGATCGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGACCTCCTC 666
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCAGGTGGTCCAGATCCCTGTGGCTGAGATCGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGACCTCCTC 666
Query 667 CCTGCCGACGGCCTCTTCATCCAGGGCAATGACCTCAAGATTGATGAAAGCTCCCTAACTGGAGAGTCTGACCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCTGCCGACGGCCTCTTCATCCAGGGCAATGACCTCAAGATTGATGAAAGCTCCCTAACTGGAGAGTCTGACCA 740
Query 741 GGTGCGCAAGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTCAGGACGGATGT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGTGCGCAAGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTCAGGACGGATGT 814
Query 815 TGGTGACTGCTGTGGGTGTGAACTCTCAGACTGGCATCATCTTTACCCTCCTGGGGGCTGGTGGTGAAGAGGAA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGTGACTGCTGTGGGTGTGAACTCTCAGACTGGCATCATCTTTACCCTCCTGGGGGCTGGTGGTGAAGAGGAA 888
Query 889 GAGAAGAAAGACAAA----------------------------------------------------------- 903
|||||||||||||||
Sbjct 889 GAGAAGAAAGACAAAAAAGGTGTGAAGAAGGGGGATGGCCTTCAGCTACCAGCAGCAGACGGTGCGGCAGCTTC 962
Query 904 -------------------------------------------------------------------------- 903
Sbjct 963 AAATGCTGCAGATAGTGCGAATGCCAGCCTAGTCAATGGTAAAATGCAGGATGGCAATGTGGACGCCAGCCAGA 1036
Query 904 --AAAGCCAAACAACAGGACGGGGCAGCCGCCATGGAGATGCAGCCCCTCAAGAGTGCCGAGGGCGGCGACGCT 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCAAAGCCAAACAACAGGACGGGGCAGCCGCCATGGAGATGCAGCCCCTCAAGAGTGCCGAGGGCGGCGACGCT 1110
Query 976 GACGACAGGAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGT 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GACGACAGGAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGT 1184
Query 1050 GCAGATCGGGAAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATCATCCTGGTGCTCTACTTCACTGTGGACA 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCAGATCGGGAAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATCATCCTGGTGCTCTACTTCACTGTGGACA 1258
Query 1124 CCTTCGTGGTCAACAAGAAGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGCAGTACTTTGTCAAGTTCTTC 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCTTCGTGGTCAACAAGAAGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGCAGTACTTTGTCAAGTTCTTC 1332
Query 1198 ATCATTGGCGTGACGGTGCTGGTGGTCGCCGTGCCCGAGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCTA 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATCATTGGCGTGACGGTGCTGGTGGTCGCCGTGCCCGAGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCTA 1406
Query 1272 TTCGGTGAAGAAAATGATGAAGGACAACAATCTGGTACGCCACCTGGATGCCTGTGAGACCATGGGCAATGCCA 1345
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TTCGGTGAAGAAAATGATGAAGGACAACAACCTGGTACGCCACCTGGATGCCTGTGAGACCATGGGCAATGCCA 1480
Query 1346 CAGCCATCTGCTCAGACAAGACAGGCACGCTGACCACCAATCGCATGACAGTGGTACAGGCCTATGTCGGCGAC 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CAGCCATCTGCTCAGACAAGACAGGCACGCTGACCACCAATCGCATGACAGTGGTACAGGCCTATGTCGGCGAC 1554
Query 1420 GTCCACTATAAAGAGATCCCCGACCCCAGCTCCATCAACACCAAGACCATGGAGCTGCTGATCAATGCCATCGC 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GTCCACTATAAAGAGATCCCCGACCCCAGCTCCATCAACACCAAGACCATGGAGCTGCTGATCAATGCCATCGC 1628
Query 1494 CATCAACAGCGCCTACACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCCCTGCCTCGGCAGGTGGGCAACA 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CATCAACAGCGCCTACACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCCCTGCCTCGGCAGGTGGGCAACA 1702
Query 1568 AGACGGAGTGCGGCCTGCTGGGCTTCGTGCTGGACCTGAAGCAGGACTACGAGCCCGTGCGCAGCCAGATGCCA 1641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGACGGAGTGCGGCCTGCTGGGCTTCGTGCTGGACCTGAAGCAGGACTACGAGCCCGTGCGCAGCCAGATGCCA 1776
Query 1642 GAGGAGAAGTTGTACAAAGTGTACACCTTCAACTCCGTGCGCAAGTCCATGAGCACTGTCATCAAGCTGCCCGA 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GAGGAGAAGTTGTACAAAGTGTACACCTTCAACTCCGTGCGCAAGTCCATGAGCACTGTCATCAAGCTGCCCGA 1850
Query 1716 CGAGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGG 1789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CGAGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGG 1924
Query 1790 CGGGAGAGCCTCGTGTCTTCCGGCCCCGCGACCGGGACGAGATGGTAAAGAAGGTGATTGAGCCCATGGCTTGC 1863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CGGGAGAGCCTCGTGTCTTCCGGCCCCGCGACCGGGACGAGATGGTAAAGAAGGTGATTGAGCCCATGGCTTGC 1998
Query 1864 GATGGGCTCCGCACTATCTGCGTGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACTGGGACAATGAGAA 1937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GATGGGCTCCGCACTATCTGCGTGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACTGGGACAATGAGAA 2072
Query 1938 TGACATCCTCAACGAACTCACCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAG 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGACATCCTCAACGAACTCACCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAG 2146
Query 2012 CCATCCGCAAGTGCCAGCGGGCAGGCAT----GT---------------------------------------- 2041
|||||||||||||||||||||||||||| ||
Sbjct 2147 CCATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGCATGGTCACTGGCGACAATATCAACACGGCTCGGGCC 2220
Query 2042 ---------------------ATCCA------GGA------------------------------------GAG 2052
||||| ||| |||
Sbjct 2221 ATCGCCATCAAGTGTGGCATCATCCATCCTGGGGAGGACTTTCTGTGCCTCGAGGGCAAGGAGTTCAACAGGAG 2294
Query 2053 GAACTGCATAACCA-AAGGGG-----TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCA--- 2117
||.|.|| |||.| |||||| |||.||| |.||..|||| |||| .|
Sbjct 2295 GATCCGC--AACGAGAAGGGGGAGATTGAGCAG---------GAGCGAATTG---------ACAA----GATCT 2344
Query 2118 --CCAAAGC--CAGCCCACTGCT------CTCCT---------ACAAG------------GAAGGAAAGAT--- 2157
||||||| |.| .|||| ||||| ||||| .||||.|..||
Sbjct 2345 GGCCAAAGCTGCGG----GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGGCATCATCGA 2414
Query 2158 -------------------CTGCACGTG---------------------------------------------- 2166
|.|||.|||
Sbjct 2415 CAGCACACACACTGAGCAGCGGCAGGTGGTGGCCGTGACGGGGGACGGGACCAACGACGGGCCTGCACTCAAGA 2488
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2489 AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACATCATCCTGACA 2562
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2563 GACGACAATTTCAGCAGCATCGTCAAGGCAGTGATGTGGGGCCGCAACGTCTATGACAGCATCTCCAAATTCTT 2636
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2637 GCAGTTCCAGCTCACCGTCAACGTGGTGGCCGTGATTGTGGCCTTCACAGGCGCCTGCATCACGCAGGACTCCC 2710
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2711 CTCTGAAGGCCGTGCAGATGCTCTGGGTGAACCTCATCATGGACACGTTTGCCTCGCTGGCACTGGCCACTGAG 2784
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2785 CCGCCCACGGAGACCCTGCTGCTGAGGAAGCCGTACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGATGAA 2858
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2859 GAACATCCTGGGCCATGCTGTCTACCAGCTTGCCCTCATCTTCACCCTGCTCTTTGTTGGCGAGAAGATGTTCC 2932
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2933 AGATCGACAGCGGGAGGAACGCGCCCCTGCATTCGCCACCCTCAGAACATTACACCATCATCTTCAACACCTTC 3006
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3007 GTCATGATGCAGCTCTTCAACGAGATCAACGCCCGCAAGATCCACGGCGAGCGCAATGTCTTTGACGGCATCTT 3080
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3081 CCGGAACCCCATCTTCTGCACCATCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCAGTTTGGAGGGA 3154
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3155 AGCCATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGCTCGTT 3228
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3229 TGGGGCCAGGTCATCGCCACCATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAGAA 3302
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3303 GGAGGAGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGAGATCGACCACGCGGAGCGGGAGCTGCGGCGGG 3376
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3377 GCCAGATCCTGTGGTTCCGAGGCCTGAATCGGATCCAGACACAGATTGAAGTAGTCAATACTTTCAAGAGCGGG 3450
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3451 GCCTCCTTTCAGGGGGCCCTGCGGAGACAGTCCTCGGTCACCAGCCAGAGCCAGGATGTAGCCAATCTCTCTAG 3524
Query 2167 ------------------------------------------------------------------------- 2166
Sbjct 3525 CCCTAGTCGCGTGTCGTTGTCCAATGCTCTTTCCTCTCCGACCAGCCTTCCTCCTGCTGCAGCCGGGCAGGGC 3597
