Nucleotide Global Alignment
Description
- Query:
- TRCN0000475326
- Subject:
- XR_001746424.2
- Aligned Length:
- 4499
- Identities:
- 1362
- Gaps:
- 3137
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGGCATTGAGGAGGTAGGGAGCCAGCCCCTGGGCGCGGCCTGCAGGGTACCGGCAACCGCCCGGGTAAGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGCAGGACAAGGCCGGAGCCTGTGTCCGCCCGGCAGCCGCCCGCAGCTGCAGAGAGTCCCGCTGCGTCTCCGC 148
Query 1 --------------------------------------------------ATGTGTGCCGCTCAGATGCCGCCC 24
||||||||||||||||||||||||
Sbjct 149 CGCGTGCGCCCTCCTCGACCAGCAGACCCGCGCTGCGCTCCGCCGCTGACATGTGTGCCGCTCAGATGCCGCCC 222
Query 25 CTGGCGCACATCTTCCGAGGGACGTTCGTCCACTCCACCTGGACCTGCCCCATGGAGGTGCTGCGGGATCACCT 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGGCGCACATCTTCCGAGGGACGTTCGTCCACTCCACCTGGACCTGCCCCATGGAGGTGCTGCGGGATCACCT 296
Query 99 CCTCGGCGTGAGCGACAGCGGCAAAATAGTGTTTTTAGAAGAAGCATCTCAACAGGAAAAACTGGCCAAAGAAT 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCTCGGCGTGAGCGACAGCGGCAAAATAGTGTTTTTAGAAGAAGCATCTCAACAGGAAAAACTGGCCAAAGAAT 370
Query 173 GGTGCTTCAAGCCGTGTGAAATAAGAGAACTGAGCCACCATGAGTTCTTCATGCCTGGGCTGGTTGATACACAC 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGTGCTTCAAGCCGTGTGAAATAAGAGAACTGAGCCACCATGAGTTCTTCATGCCTGGGCTGGTTGATACACAC 444
Query 247 ATCCATGCCTCTCAGTATTCCTTTGCTGGAAGTAGCATAGACCTGCCACTCTTGGAGTGGCTGACCAAGTACAC 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATCCATGCCTCTCAGTATTCCTTTGCTGGAAGTAGCATAGACCTGCCACTCTTGGAGTGGCTGACCAAGTACAC 518
Query 321 ATTTCCTGCAGAACACAGATTCCAGAACATCGACTTTGCAGAAGAAGTATATACCAGAGTTGT----------- 383
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATTTCCTGCAGAACACAGATTCCAGAACATCGACTTTGCAGAAGAAGTATATACCAGAGTTGTCACACTTGAGC 592
Query 384 -------------------------------------------------------------------------- 383
Sbjct 593 TTCTGATGTCTGTACTAGTCAAGAAAACCCTGTTTTTTCACAAAGGAGGAAACATGGAATGTAAGCAACCTTCT 666
Query 384 -----------------------------CAGGAGAACACTAAAGAATGGAACAACCACAGCTTGTTACTTTGC 428
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAAGGTCACGTAGCTAATAACAGGCAAAACAGGAGAACACTAAAGAATGGAACAACCACAGCTTGTTACTTTGC 740
Query 429 AACAATTCACACTGACTCATCTCTGCTCCTTGCCGACATTACAGATAAATTTGGACAGCGGGCATTTGTGGGCA 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AACAATTCACACTGACTCATCTCTGCTCCTTGCCGACATTACAGATAAATTTGGACAGCGGGCATTTGTGGGCA 814
Query 503 AAGTTTGCATGGATTTGAATGACACTTTTCCAGAATACAAGGAGACCACTGAGGAATCGATCAAGGAAACTGAG 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGTTTGCATGGATTTGAATGACACTTTTCCAGAATACAAGGAGACCACTGAGGAATCGATCAAGGAAACTGAG 888
Query 577 AGATTTGTGTCAGAAATGCTCCAAAAGAACTATTCTAGAGTGAAGCCCATAGTGACACCACGTTTTTCCCTCTC 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGATTTGTGTCAGAAATGCTCCAAAAGAACTATTCTAGAGTGAAGCCCATAGTGACACCACGTTTTTCCCTCTC 962
Query 651 CTGCTCTGAGACTTTGATGGGTGAACTGGGCAACATTGCTAAAACCCGTGATTTGCACATTCAGAGCCATATAA 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGCTCTGAGACTTTGATGGGTGAACTGGGCAACATTGCTAAAACCCGTGATTTGCACATTCAGAGCCATATAA 1036
Query 725 GTGAAAATCGTGATGAAGTTGAAGCTGTGAAAAACTTATACCCCAGTTATAAAAACTACACATCTGTGTATGAT 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTGAAAATCGTGATGAAGTTGAAGCTGTGAAAAACTTATACCCCAGTTATAAAAACTACACATCTGTGTATGAT 1110
Query 799 AAAAACAATCTTTTGACAAATAAGACAGTGATGGCACACGGCTGCTACCTCTCTGCAGAAGAACTGAACGTATT 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAAAACAATCTTTTGACAAATAAGACAGTGATGGCACACGGCTGCTACCTCTCTGCAGAAGAACTGAACGTATT 1184
Query 873 CCATGAACGAGGAGCATCCATCGCACACTGTCCCAATTCTAATTTATCGCTCAGCAGTGGATTTCTAAATGTGC 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCATGAACGAGGAGCATCCATCGCACACTGTCCCAATTCTAATTTATCGCTCAGCAGTGGATTTCTAAATGTGC 1258
Query 947 TAGAAGTCCTGAAACATGAAGTCAAGATAGGGCTGGGTACAGACGTGGCTGGTGGCTATTCATATTCCATGCTT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TAGAAGTCCTGAAACATGAAGTCAAGATAGGGCTGGGTACAGACGTGGCTGGTGGCTATTCATATTCCATGCTT 1332
Query 1021 GATGCAATCAGAAGAGCAGTGATGGTTTCCAATATCCTTTTAATTAATAAGGTAAATGAGAAAAGCCTCACCCT 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GATGCAATCAGAAGAGCAGTGATGGTTTCCAATATCCTTTTAATTAATAAGGTAAATGAGAAAAGCCTCACCCT 1406
Query 1095 CAAAGAAGTCTTCAGACTAGCTACTCTTGGAGGAAGCCAAGCCCTGGGGCTGGATGGTGAGATTGGAAACTTTG 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CAAAGAAGTCTTCAGACTAGCTACTCTTGGAGGAAGCCAAGCCCTGGGGCTGGATGGTGAGATTGGAAACTTTG 1480
Query 1169 AAGTGGGCAAGGAATTTGATGCCATCCTGATCAACCCCAAAGCATCCGACTCTCCCATTGACCTGTTTTATGGG 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAGTGGGCAAGGAATTTGATGCCATCCTGATCAACCCCAAAGCATCCGACTCTCCCATTGACCTGTTTTATGGG 1554
Query 1243 GACTTTTTTGGTGATATTTCTGAGGCTGTTATCCAGAAGTTCCTCTATCTAGGAGATGATCGAAATATTGAAGA 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GACTTTTTTGGTGATATTTCTGAGGCTGTTATCCAGAAGTTCCTCTATCTAGGAGATGATCGAAATATTGAAGA 1628
Query 1317 GGTTTATGTGGGCGGAAAGCAGGTGGTTCCGTTTTCCAGCTCAGTG---------------------------- 1362
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGTTTATGTGGGCGGAAAGCAGGTGGTTCCGTTTTCCAGCTCAGTGTAAGACCCTCGGGCGTCTACAAAGTTCT 1702
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 1703 CCTGGGATTAGCGTGGTTCTGCATCTCCCTTGTGCCCAGGTGGAGTTAGAAAGTCAAAAAATAGTACCTTGTTC 1776
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 1777 TTGGGATGACTATCCCTTTCTGTGTCTAGTTACAGTATTCACTTGACAAATAGTTCGAAGGAAGTTGCACTAAT 1850
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 1851 TCTCAACTCTGGTTGAGAGGGTTCATAAATTTCATGAAAATATCTCCCTTTGGAGCTGCTCAGACTTACTTTAA 1924
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 1925 GCTCAAACAGAAGGGAATGCTATTACTGGTGGTGTTCCTACGGTAAGACTTAAGCAAAGCCTTTTTCATATTTG 1998
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 1999 AAAATGTGGAAAGAAAAGATGTTCCTAAAAGGTTAGATATTTTGAGCTAATAATTGCAAAAATTAGAAGACTGA 2072
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2073 AAATGGACCCATGAGAGTATATTTTTATGAGGGAGCAAAAGTTAGACTGAGAACAAACGTTAGAAAATCACTTC 2146
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2147 AGATTGTGTTTGAAAATTATATACTGAGCATACTAATTTAAAAAGAGAACTTGTTGAAATTTAAAACGTGTTTC 2220
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2221 TAGGTTGACCTTGTGTTTTAGAAATTTGCACTTAATGGAATTTGCATTTCAGAGATGTGTTAGTGTTGTGCTTT 2294
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2295 GCCTTCTTTGGCGATGAATGTCAGAAATTGAATGCCACATGCTTTCATAATATAGTTTTGTGCTTCAAAGTGTT 2368
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2369 TGACAGAAGTTGGGTATTAAAGATTTAAAGTCTCTTAGGAATATTATTCATGTAACTCCATGGCATAAATAGTT 2442
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2443 GTATTTTTGTGTACTTTAAAATCAACTTATAACTGTGAGATGTTATTGCTTCCATTTTATTAGAAGAGAAACAA 2516
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2517 ATTCCATGCTTTATGGAATTTATGTAGACTGGAGTCTTCGTGAACTGGGGCAAATGCTGGCATCCAGGAGCCGC 2590
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2591 CAATACTAACAGGACAGGTTCCATTGCCATGGCCTATTCCACCCAAACAATATGTTGTAGTTTCTGGAAATTCC 2664
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2665 ATACTCAGATATCAGTCTGCTAGAACTTTAAAATGAAGGACAAATCCTGTTAAAGAAATATTGTTAAAAATCTT 2738
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2739 TAAACCCTGTGTATTGAAAGCACTCTATTTTCTAATTTTATCCAGTTTTCTGTTTAACTCCTTATAATGTTTAG 2812
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2813 GATATTAAAATTTTAGGATAATGAAGAGTACATAATGTCCTACTTAATATTTATGTTAATAGGACTTAATTCTT 2886
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2887 ACTAGACATCTAGGAACATTACAAAGCAAAGACTATTTTTATGCTTCCATAACCTAGAATTAAAACCAAATTAT 2960
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 2961 GACCTTATGATAAATCTTTAAGTATTGGTGTGAATGTTATTTAAATTCTATATTTTTCTTATTTAATTACAAAT 3034
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3035 ACTATAAATGAGCAAGGAAAAGGAATAGACTTTCTTAATATATTATAACACTCATTCCTAGAGCTTAGGGGTGA 3108
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3109 CTCTTTAATATTACCTTATAGTAGAAACTTTATGTAATATAGCTAACTCCGTATTTACAGAACAAAAAAACACA 3182
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3183 GTTCCCCCTCCTGTAGTATAAATTTTATTTTCACATACTTAGCTAATTTAGCAGTAATTGGCCCAGTTTTTTCC 3256
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3257 CTAATAGAAATACTTTTAGATTTGATTATGTATACATGACACCTAAAGAGGGAACAAAAGTTAGTTTTATTTTT 3330
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3331 TTAATAAACAACAGAGTTTGTTTTGTGAGATAAGTATCTTAGTAAACCCAATTTCCAGTCTTAGTCTGTATTTC 3404
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3405 CAATATTTCTAATTCCTGAGCCACGTCAAAGATGCCTTGCCAAATTTCTCCCCATTTCTCTACGGGGCTAGCAA 3478
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3479 AAATCTTCAGCTTTATCACTCAACCCCTGCCAAAGGAACTTGATTACATGGTGTCTAACCAAATGAGCAGGCTT 3552
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3553 AGGAATTTAGATGAGATGTGTAAGATTCACTTACAGGCAGTAGCTGCTTCTAGCATTTGCAAGATCCTACACTT 3626
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3627 TTACCTTCTTTAAGGGTGTACATTTTGATGTTGAACATCAGTTTTCATGTAGACTTAGGACTCATGTGCAGTAA 3700
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3701 ATATAAATAAGTGTAGCATCAGAAGCAGTAGGAATGGCCGTATACAACCATCCTGTTAAACATTTAAATTTAGC 3774
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3775 TCTGATAGTGTGTTAAGACCTGAATATCTTTCCTAGTAAAAATAGGATGTGTTGAAATATTTATATGTACTTTG 3848
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3849 ATCTCTCCACATCACTTATAACTTATGTGTTTTATTTCTCCAAGTGCGGTGTTCCTGAATGTTATGTATGCTTT 3922
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3923 TTTTTCTGTACCACAGGCATTATCTATACCTGGGGCCAGATTTTCTGCACTTTGAAATGTTGCCTTTGCCTAAT 3996
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 3997 GTAGGTTGACTTTCTGAATTGTGGAGAGGCACTTTTCCAAGCCAATCTTATTTGTCACTTTTTGTTTTAATATC 4070
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 4071 TTGCTCTCTGACAGGAAAGAAACAATTCACTTACCAGCCTCCTCACCCCATCCTCCACCATTTCCTTAATGTTC 4144
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 4145 CATGGTATTTTCAACGGAATACACTTTGAAAGTTCTCAGAATAACTGTAGAATGTGCTGGAAATGGAACATTCT 4218
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 4219 CAGATAAGGAGGAACTGGCCAGATCAAACTAAGCTGTGTTCCCATCCCTCCTGAAACAGGATCTTATGGTGCTT 4292
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 4293 TAGCCCAGGACGTCAAGTATCCCCTAGGTATGAAACCCAGAGTGGAGCATGCTTTGAAGGTCCCTCAGCTACAT 4366
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 4367 GCAGACTAGACTGCATGTAGCTGACTCTAACTGCCCTGGGAAACTATCCTGAGCTTTGACAGACCTGCCATGAA 4440
Query 1363 ----------------------------------------------------------- 1362
Sbjct 4441 TCTTAAGCTTTTATTGTCCCTTGCTGCCTATCTGTGAGGAATAAAGTTGCTTCACTTAC 4499