Nucleotide Global Alignment
Description
- Query:
- TRCN0000475406
- Subject:
- NM_001330724.2
- Aligned Length:
- 1725
- Identities:
- 489
- Gaps:
- 1219
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAAAATATGAAAACCTGGGTTTGGTTGGAGAAGGGAGTTATGGAATGGTGATGAAGTGTAGGAATAAAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TACTGGAAGAATTGTGGCCATAAAGAAGTTCTTAGAAAGTGACGATGACAAAATGGTTAAAAAGATTGCAATGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGAAATCAAGTTACTAAAGCAACTTAGGCATGAAAACTTGGTGAATCTCTTGGAAGTGTGTAAGAAAAAAAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGGTACCTAGTCTTTGAATTTGTTGACCACACAATTCTTGATGACTTGGAGCTCTTTCCAAATGGACTAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTACCAAGTAGTTCAAAAGTATTTGTTTCAGATTATTAATGGAATTGGATTTTGTCACAGTCACAATATCATAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACAGAGATATAAAGCCAGAGAATATATTAGTCTCCCAGTCTGGCGTTGTCAAGCTATGCGATTTTGGATTTGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGAACATTGGCAGCTCCTGGGGAGGTTTATACTGATTATGTGGCAACCCGATGGTACAGAGCTCCAGAACTATT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTTGGTGATGTCAAGTATGGCAAGGCTGTTGATGTGTGGGCCATTGGTTGTCTGGTAACTGAAATGTTCATGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGAACCCCTATTTCCTGGAGATTCTGATATTGATCAGCTATATCATATTATGATGTGTTTAGGTAATCTAATT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCAAGGCATCAGGAGCTTTTTAATAAAAATCCTGTGTTTGCTGGAGTAAGGTTGCCTGAAATCAAGGAAAGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTCTTGAAAGACGCTATCCTAAGCTCTCTGAAGTGGTGATAGATTTAGCAAAGAAATGCTTACATATTGACC 814
Query 1 --------------------------------------------------ATGGCCTAT--ATTT--------A 14
|||| || |||| .
Sbjct 815 CCGACAAAAGACCCTTCTGTGCTGAGCTCCTACACCATGATTTCTTTCAAATGG---ATGGATTTGCTGAGAGG 885
Query 15 TTTT-----------CATTT--TAGTA--------------AACTGTTTCACGTTAGACCTGTAA-----CCCA 56
|||| ||.|| .|||| ||.||||| |.||| |.||| ||||
Sbjct 886 TTTTCCCAAGAACTACAGTTAAAAGTACAGAAAGATGCCAGAAATGTTT--CTTTA----TCTAAAAAATCCCA 953
Query 57 A------------GGAGATGTGTATAGAGCTGA------AACTGAAGAAAGAAAAACACTTGTGGTACAGGATA 112
| |.|.|.| |.|.||.||| |..||||||||||||||||||||||||||||||||
Sbjct 954 AAACAGAAAGAAGGAAAAAG---AAAAAGATGATTCCTTAGTTGAAGAAAGAAAAACACTTGTGGTACAGGATA 1024
Query 113 CCAATGCTGATCCCAAAATTAAGGATTATAAACTATTTAAAATAAAAGGCTCAAAAATTGATGGAGAAAAAGCT 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1025 CCAATGCTGATCCCAAAATTAAGGATTATAAACTATTTAAAATAAAAGGCTCAAAAATTGATGGAGAAAAAGCT 1098
Query 187 GAAAAAGGCAATAGAGCTTCAAATGCCAGCTGTCTCCATGACAGTAGGACAAGCCACAACAAAATAGTGCCTTC 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 GAAAAAGGCAATAGAGCTTCAAATGCCAGCTGTCTCCATGACAGTAGGACAAGCCACAACAAAATAGTGCCTTC 1172
Query 261 AACAAGCCTCAAAGACTGCAGCAATGTCAGCGTGGACCACACAAGGAATCCAAGCGTGGCAATTCCCCCACTTA 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 AACAAGCCTCAAAGACTGCAGCAATGTCAGCGTGGACCACACAAGGAATCCAAGCGTGGCAATTCCCCCACTTA 1246
Query 335 CACACAATCTTTCTGCAGTTGCTCCCAGCATTAATTCTGGAATGGGGACTGAGACTATACCAATTCAGGGTTAC 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1247 CACACAATCTTTCTGCAGTTGCTCCCAGCATTAATTCTGGAATGGGGACTGAGACTATACCAATTCAGGGTTAC 1320
Query 409 AGAGTGGATGAGAAAACTAAGAAGTGTTCTATTCCATTTGTTAAACCGAACAGACATTCCCCATCAGGCATTTA 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 AGAGTGGATGAGAAAACTAAGAAGTGTTCTATTCCATTTGTTAAACCGAACAGACATTCCCCATCAGGCATTTA 1394
Query 483 TAACATTAATGTGACCACATTAGTATC--------AGGACCTCCCCT--------------------------- 521
||||||||||||||||||||||||.|| |..|||| ||
Sbjct 1395 TAACATTAATGTGACCACATTAGTCTCTAGTGAAAAAAACCT---CTTTTGGGCAAGTAAGAAAAGAAGAGAAT 1465
Query 522 -------------------------------------------------------------------------- 521
Sbjct 1466 ACTCCAGGACAGATGTCCGTTTGCCTGAACTAAACTATAATCATCTCCCTGAACTAAGAGCACTGGGAGGCATA 1539
Query 522 -------------------------------------------------------------------------- 521
Sbjct 1540 GCTCGAAATTCCAGGCTAACAAAGAAAGAGAGCAAAATTCTTTCAGAATCTCGAATTCCTTCTCTGGCTGCTAT 1613
Query 522 -------------------------------------------------------------------------- 521
Sbjct 1614 TGACCTGCACACCCCCAGTATTACATTACATCAGGTATCAGGACCTCCCCTGTCAGATGATTCAGGGGCTGATT 1687
Query 522 ----------------------- 521
Sbjct 1688 TGCCTCAAATGGAACACCAGCAC 1710
