Nucleotide Global Alignment
Description
- Query:
- TRCN0000475444
- Subject:
- XM_006501741.1
- Aligned Length:
- 2104
- Identities:
- 547
- Gaps:
- 1484
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
|||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct 149 TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTT----------------- 279
|||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||
Sbjct 223 GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGGGTGA 296
Query 280 -------------------CCTGT----------------------TCAAAAG--------------------- 291
||||| ||.||||
Sbjct 297 ACCTAAGGAAGTAGTTAAGCCTGTGCCCATTACATCTCCTGCTGTATCCAAAGTCACTTCCACTACCAACATGG 370
Query 292 -------------------------------------------AAAA--CACA--------------------- 299
|||| ||||
Sbjct 371 CCTACAATAAAGCACCACGGCCCTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
Query 300 -------------------------------------------------------------------------- 299
Sbjct 445 GCGTTCACCCCAGCCCATGCCGCCACTTCATCACATGCTTCCCCCACACCTGTGGCCGCTGCCACTCCCCTCCA 518
Query 300 -------------------------AGTGACAA----------------------------------------- 307
||||.|||
Sbjct 519 CCTCTCTGCATCCGGACTGCATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTA 592
Query 308 -------------------------------------------------------------------------- 307
Sbjct 593 AACCTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAG 666
Query 308 -------------------------------------------ATAACCCTGGCACTGTGAAAATCCCACCTAA 338
.|||||||||||||||||||||.||||||||
Sbjct 667 GGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGTAACCCTGGCACTGTGAAAATTCCACCTAA 740
Query 339 ACGCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCA 412
|||||||||||||||||||||||||||||||.|.||.|||||||||||..||||||||||||||||||||||||
Sbjct 741 ACGCCCACCAAGAAAACACATTGTGGAGCGCAACACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCA 814
Query 413 AGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGGAACAACTCAATCTCGCTCTTTCCGAATC 486
||||..|.|||||||||||.|||||.||||||||.||..||||||||||.|||||.|||||.||||||||.|||
Sbjct 815 AGAAACGGCTGATTGAGGACACTGAGGACTGGCGCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATC 888
Query 487 CTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCGATAATACAAAGAAGGCAAAGGAAA--AG 558
|||||||||||||||||||||||.|||.|||.||||||||||...||.|||||.|||||||||||.|.|| ||
Sbjct 889 CTTGCCCAGATCACTGGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAATGTAAGCAG 962
Query 559 ATACCCCTTCACG-TCTTTAG--------------------------------------TCCC--------AAA 585
.| ||.||.| .||.||| |||| |.|
Sbjct 963 GT----CTACAAGAACTGTAGAAGGTGCTTTGGAAGGCTTTGGAAACTTTCCTGCCTTCTCCCCTCCTACTAGA 1032
Query 586 TACA-------------CAAAATTACGTGA-----CTGGCACCATGAAGTTTCAGCACGTGCTCT--------T 633
|||| || |||| |||.||| .||.||.|| |||||| .
Sbjct 1033 TACAGTGCTGTAGTCGTCA-------GTGATGCGGCTGCCAC-----TGTGTCTGC---TGCTCTCGCTGCGAA 1091
Query 634 AACGTACAG----------------------------------------------------------------- 642
||| |||
Sbjct 1092 AAC---CAGGCTCTTCGGCCCTGAAAACTCCCAGTCTCTTCTGGATGCACTGTGCATCAGCACTGTCCCCAAGC 1162
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1163 CTCTAGCTCTTTCCTGTCTTCAGTCCTCTGAGGAGTCGAGTGGCTCTGTCCACGTTAAGAAGAGCAGTAGCACC 1236
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1237 CAGGAGCCTTCTCAGCAACCGGCGTCATCTGGAGCTTCACCTCTGAGCGCGTCTGAGGGCCCCGAGAGCCCAGG 1310
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1311 TTCCAGCAGGCCCTCGGTGGCTGGCCTCCGCTCCGCTGCTGCTTTCAAGCCTGTAGGATCCACCAGCGTCAAGT 1384
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1385 CACCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGGGAGAATTTCAAACAATGCACGTTCTTCAGGT 1458
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1459 ACAGGGGCGTCTGTGGGGCCTCCCCAGCCAAGTGACCAAGACACACTTGTGCAGAGAGCGGAACACATTCCAGC 1532
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1533 GGGCAAGCGGACCCCCATGTGTGCCCACTGCAACCAAGTTATCAGGGGACCTTTTCTTGTGGCTCTGGGGAAGT 1606
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1607 CCTGGCATCCAGAAGAATTTAACTGTGCTCATTGCAAAAACACAATGGCCTACATAGGCTTTGTAGAGGAGAAG 1680
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1681 GGAGCACTGTACTGTGAGCTATGCTATGAGAAGTTCTTTGCTCCTGAATGTGGCCGGTGCCAAAGGAAGATCCT 1754
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1755 TGGAGAAGTCATCAATGCTTTGAAGCAGACCTGGCATGTGTCCTGTTTTGTGTGTGTGGCCTGTGGAAAACCCA 1828
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1829 TTCGTAATAATGTTTTCCACTTGGAAGATGGCGAGCCCTACTGTGAGACAGACTACTACGCCCTTTTTGGAACA 1902
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1903 ATATGTCGTGGATGTGAATTCCCCATAGAGGCTGGTGACATGTTCCTGGAAGCTCTGGGATACACTTGGCATGA 1976
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1977 TACTTGCTTTGTGTGCTCTGTGTGTTGTGAAAGTTTGGAAGGGCAGACATTTTTCTCCAAGAAGGACAAGCCAC 2050
Query 643 -------------------------------- 642
Sbjct 2051 TTTGCAAAAAACATGCTCATTCTGTGAATTTT 2082
