Nucleotide Global Alignment
Description
- Query:
- TRCN0000475456
- Subject:
- NM_001177374.1
- Aligned Length:
- 5268
- Identities:
- 1144
- Gaps:
- 3954
Alignment
Query 1 ATGGCGTCGGAGCTAGAGCCAGAGGTGCAGGCCATCGACCGGAGCTTGCTGGAATGTTCGGCCGAGGAGATTGC 74
||||||||||||.|.|||||.||||||||||||||||||||.||.||||||||||||||.|||||.|||||.||
Sbjct 1 ATGGCGTCGGAGATGGAGCCCGAGGTGCAGGCCATCGACCGCAGTTTGCTGGAATGTTCTGCCGAAGAGATCGC 74
Query 75 GGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCACTATGTACCCAAAATCT 148
.||||.|||||||||||||||.|||||||..||||||||||||||||||||||||||||.|||.||||||||||
Sbjct 75 AGGGAGATGGCTGCAAGCAACCGACCTCAACAGAGAAGTGTACCAGCATTTAGCCCACTGTGTGCCCAAAATCT 148
Query 149 ACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTTGTTGGGACCAATGGAA 222
|||||.||||.||.|||||.||.||.|||||.|||||||.||||||||||||..|..||.|||||||.|||||.
Sbjct 149 ACTGCCGGGGCCCTAACCCCTTCCCTCAGAAGGAAGACACGCTGGCACAGCACATCCTGCTGGGACCGATGGAG 222
Query 223 TGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACAAACCTTCTCATCTTTG 296
||||||.|.||.|.||||||.|||||..|.|||||||||||.||.|||||.||||||||.||||||||.||.||
Sbjct 223 TGGTACATCTGCGCTGAAGACCCTGCGCTGGGATTTCCAAAGCTCGAGCAGGCAAACAAGCCTTCTCACCTCTG 296
Query 297 TGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGATCCAACTTGTGTTTTGT 370
|||.||.||.||||||||.||.||.||||||||.||.||||||||||||||||||||.||.||.||||||||.|
Sbjct 297 TGGCCGAGTGTTTAAAGTGGGGGAACCTACATACTCCTGCAGAGACTGTGCAGTTGACCCCACCTGTGTTTTAT 370
Query 371 GCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATCAGGAGGTGGAGGTTTC 444
|||||||||||||..||||||||||.||.|||||.|||||||||||||||||.|||||.|||||.||.||.|||
Sbjct 371 GCATGGAGTGCTTCCTGGGAAGTATCCATAGAGACCATCGATATAGGATGACCACATCGGGAGGAGGGGGCTTC 444
Query 445 TGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAACTTAACACCTCTGAAAT 518
||||||||||||||.|||||.||.|||||||||||.||||||||.||.||.||..|.||.|.||.|||||||.|
Sbjct 445 TGTGACTGTGGTGACACTGAGGCGTGGAAAGAGGGACCTTACTGCCAGAAGCACAAGCTCAGCAGCTCTGAAGT 518
Query 519 TGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTATAACATTTTTGCTATTA 592
||.|||.||.||||||||||||||.|||.||||||||||||||||.||.||||||||.||||||||||||||||
Sbjct 519 TGTGGAGGAGGAGGATCCTCTTGTGCATCTATCAGAAGATGTGATCGCCAGAACTTACAACATTTTTGCTATTA 592
Query 593 CGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGATTTAGAGATGGTAGAG 666
.||||||.|||||||||||.|||.|.||||||||||||||||||||||||||.|.|||.|||||..|||.||||
Sbjct 593 TGTTTCGATATGCAGTAGATATACTGACCTGGGAAAAAGAAAGTGAATTGCCTGAAGACTTAGAAGTGGCAGAG 666
Query 667 AAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTACGAACAAGTTATTTATACTCTTCA 740
|||||||||||||||||.||||||||||||||||||||||||||||||||.||.|||||.||||||||.|||||
Sbjct 667 AAGAGTGACACCTACTACTGCATGCTGTTTAATGATGAGGTTCACACCTATGAGCAAGTCATTTATACCCTTCA 740
Query 741 GAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGAGATGGGCGTAGGTCTG 814
|||||||||.|||||||||||.||.|||||.|||||.||||||||||||||.|||||||||||.||||||||||
Sbjct 741 GAAAGCTGTGAACTGTACACAGAAGGAAGCCATTGGCTTTGCAACTACAGTTGATCGAGATGGCCGTAGGTCTG 814
Query 815 TTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATACCAGTAGACAGACAAAG 888
|.||||||||||||||.|||||.|||||.||||||||..||||.||||||||.||.|||||.||||||||.|||
Sbjct 815 TCCGATATGGAGATTTCCAGTACTGTGATCAAGCAAAGACAGTCATTGTGAGGAACACCAGCAGACAGACCAAG 888
Query 889 CCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGAAACTTTTGTCTTGGCT 962
||.||||||||||||||||||||.||.||..|.|..||.|||||||||||||||||||||..|.||||.|||||
Sbjct 889 CCGCTCAAAGTTCAAGTTATGCACTCCTCCGTGGCTGCTCATCAGAATTTTGGTTTGAAAGCTCTGTCGTGGCT 962
Query 963 GGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTACAAGAAGGGCCAGATG 1036
|||||||.||||||||||.|||||||||||||||.|||||||.|||||||||||.|||||||||||.|||||||
Sbjct 963 GGGAAGTGTTATTGGATACTCAGATGGCCTTCGCAGGATTTTGTGTCAAGTTGGATTACAAGAAGGTCCAGATG 1036
Query 1037 GTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGGTGCTAGGAGTGTATAT 1110
|.||||||||||||||.||.||||||||||||||||.|||||||||||||||||||||.|||||||||||.|||
Sbjct 1037 GCGAAAACTCTTCTCTGGTCGACAGACTGATGCTTAATGATTCCAAATTATGGAAAGGGGCTAGGAGTGTGTAT 1110
Query 1111 CATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTGTTCGATTTGCAAAAAA 1184
||.|||||||||||||||||.|||||.|||||..|.||.||.|||||.||.||.||..||||||||||.|||||
Sbjct 1111 CACCAGTTGTTCATGAGCAGCCTGCTCATGGACCTCAAGTATAAGAAGCTGTTCGCGCTTCGATTTGCTAAAAA 1184
Query 1185 CTATGAGCGTTTGCAGAGTGATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTC 1258
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTATGAGCGTTTGCAGAGAGATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTC 1258
Query 1259 AGATATTCACGGTTCCTTCACTT-------TTCTCTATCT-------------CTGCTGGGCG----CAGT--G 1306
||||||||||.|||||||||||| |.||| || |||.||..|| ||.| |
Sbjct 1259 AGATATTCACAGTTCCTTCACTTGCGCGAATGCTC---CTCACAGAAGAGAACCTGATGACCGTTATCATTAAG 1329
Query 1307 GC--TCA-----CCTCTG-------------------------------------------------------- 1317
|| ||| |.|.||
Sbjct 1330 GCTTTCATGGACCATTTGAAACACAGAGATGCCCAGGGCAGATTCCAGTTTGAACGCTACACTGCCCTCCAAGC 1403
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1404 CTTCAAGTTCAGGAGAGTCCAGAGCCTCATCTTAGATCTCAAGTATGTATTGATTAGCAAACCAACGGAGTGGT 1477
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1478 CAGATGAGCTGAGGCAGAAGTTCTTACAAGGGTTCGATGCCTTCTTGGAATTACTGAAGTGCATGCAGGGAATG 1551
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1552 GACCCGATCACGCGTCAGGTGGGACAGCACATTGAGATGGAGCCAGAGTGGGAAGCAGCCTTCACACTGCAGAT 1625
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1626 GAAGCTGACACACGTCATCTCAATGGTGCAGGACTGGTGTGCTCTGGACGAAAAAGTGTTAATTGAAGCTTACA 1699
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1700 AGAAATGCCTGGCTGTGCTGACACAGTGTCATGGCGGATTTACTGATGGTGAACAGCCAATCACACTCAGTATT 1773
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1774 TGTGGACACTCGGTGGAAACCATCAGATACTGTGTTTCCCAAGAAAAAGTTAGCATTCACCTCCCAATTTCTCG 1847
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1848 CTTGCTTGCAGGTTTGCATGTATTGTTAAGCAAAAGTGAAGTGGCATATAAATTTCCAGAGCTCCTACCTCTAA 1921
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1922 GTGAACTGAGCCCACCCATGTTGATAGAACATCCTCTTAGATGTCTTGTCTTATGTGCTCAAGTGCATGCTGGG 1995
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1996 ATGTGGAGAAGAAATGGCTTCTCTCTAGTAAATCAGATCTATTACTACCATAATGTGAAATGCAGGCGAGAGAT 2069
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2070 GTTCGACAAGGACATAGTGATGCTTCAGACAGGTGTCTCCATGATGGACCCAAACCACTTCCTGATGATCATGC 2143
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2144 TCAGCCGCTTTGAACTCTATCAGCTCTTCAGCACGCCTGACTATGGGAAGAGATTCAGTTCTGAGGTTACCCAT 2217
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2218 AAGGACGTCGTTCAGCAGAACAACACTCTGATCGAAGAGATGCTCTACCTCATCATCATGCTTGTGGGAGAAAG 2291
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2292 ATTCAACCCTGGGGTTGGACAGGTGGCTGCCACAGATGAAATCAAGAGGGAGATTATCCATCAGTTGAGCATCA 2365
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2366 AGCCTATGGCTCACAGTGAGCTGGTGAAGTCTCTGCCTGAAGATGAGAACAAGGAGACCGGCATGGAGAGCGTC 2439
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2440 ATCGAGTCCGTTGCACATTTCAAGAAACCTGGGCTCACAGGGCGAGGCATGTATGAGCTGAAGCCAGAGTGTGC 2513
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2514 CAAAGAGTTCAACCTGTATTTTTATCATTTCTCCAGGGCAGAGCAGTCCAAGGCAGAGGAAGCTCAGCGGAAAT 2587
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2588 TGAAAAGAGAAAATAAAGAAGATACAGCACTCCCTCCTCCGGCTTTGCCACCGTTCTGCCCTTTGTTCGCGAGT 2661
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2662 CTGGTTAACATCTTGCAGTGTGACGTCATGCTGTACATCATGGGAACGATCCTGCAGTGGGCTGTAGAGCATCA 2735
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2736 CGGGTCTGCCTGGTCAGAGTCCATGCTACAGAGGGTGCTGCATTTGATCGGGATGGCTCTCCAGGAAGAGAAGC 2809
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2810 ACCACTTGGAGAACGCCGTGGAAGGGCACGTGCAGACCTTCACCTTCACACAGAAGATTTCAAAGCCTGGTGAT 2883
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2884 GCACCACATAACTCCCCGAGCATCCTAGCTATGCTGGAGACCTTGCAGAACGCCCCCTCCCTGGAAGCCCACAA 2957
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2958 GGACATGATCAGGTGGTTGCTAAAGATGTTTAATGCAATTAAGAAGATAAGAGAGTGTTCATCCAGCAGCCCTG 3031
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3032 TGGCCGAGGCGGAGGGAACCATAATGGAGGAGAGCTCAAGAGACAAGGACAAAGCAGAGAGGAAAAGAAAAGCC 3105
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3106 GAGATCGCCAGACTGCGCCGGGAGAAGATCATGGCCCAGATGTCTGAGATGCAGCGGCACTTCATTGACGAAAA 3179
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3180 CAAAGAGCTCTTCCAGCAGACCCTAGAGCTGGACACCTCTGCCTCTGCCACTCTTGACAGCAGCCCTCCCGTTT 3253
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3254 CAGACGCAGCTCTTACAGCACTGGGCCCAGCACAGACACAGGTCCCTGAACCGAGACAGTTTGTCACCTGTATA 3327
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3328 TTATGTCAAGAGGAGCAAGAGGTGACTGTGGGAAGCAGGGCGATGGTCTTGGCAGCGTTTGTTCAGAGGTCAAC 3401
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3402 GGTTCTGTCAAAAGACAGGACGAAAACCATCGCGGACCCAGAAAAATATGATCCATTATTCATGCACCCCGATC 3475
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3476 TGTCTTGTGGGACACACACTGGCAGCTGTGGGCACGTTATGCATGCCCATTGTTGGCAAAGGTATTTTGATTCC 3549
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3550 GTTCAAGCCAAGGAGCAGCGAAGGCAGCAGCGGCTGCGCTTGCACACTAGCTACGATGTAGAGAATGGCGAGTT 3623
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3624 CCTCTGCCCGCTCTGTGAGTGCCTGAGCAACACGGTGATCCCCCTGCTGCTTCCTCCCAGGAGCATCCTCAGCA 3697
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3698 GGAGGTTAAATTTTTCAGACCAACCAGATCTGGCACAGTGGACGAGAGCAGTAACACAGCAGATAAAGGTGGTC 3771
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3772 CAGATGCTGAGGAGAAAGCACAATGCTGCTGACACGTCTTCTTCAGAGGACACAGAAGCCATGAATATAATACC 3845
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3846 GATCCCCGAAGGCTTCAGGCCTGATTTTTATCCTAGGAACCCATATTCTGATAGCATAAAAGAAATGTTAACGA 3919
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3920 CATTTGGAACGGCTGCTTACAAGGTGGGACTGAAGGTTCATCCTAATGAAGGTGACCCCCGTGTGCCCATCCTG 3993
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3994 TGCTGGGGGACCTGTGCATACACCATCCAGAGCATAGAAAGAATTTTGAGTGATGAGGAGAAGCCTGTTTTTGG 4067
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4068 ACCTCTGCCTTGTAGACTGGACGACTGTCTCAGGTCGTTAACACGGTTTGCAGCAGCACATTGGACAGTGGCGT 4141
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4142 TACTTCCTGTGGTACAAGGACACTTCTGTAAACTCTTTGCATCCTTGGTGCCTAGTGACAGCTATGAAGACCTC 4215
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4216 CCGTGCATACTAGACATCGACATGTTTCACTTGCTGGTGGGCCTGGTGCTCGCTTTCCCAGCTCTGCAGTGTCA 4289
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4290 GGATTTTTCAGGAAGCAGCCTGGCCACTGGGGACCTGCACATCTTCCACTTGGTTACCATGGCACACATCGTAC 4363
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4364 AGATCTTACTTACCTCATGTACAGAAGAGAATGGCATGGATCAAGAGAATCCCACTGGGGAAGAAGAACTGGCC 4437
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4438 ATTCTCTCTTTGCACAAAACACTTCACCAGTATACTGGAAGTGCCTTGAAAGAAGCCCCCTCCGGCTGGCACCT 4511
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4512 GTGGAGGAGCGTCCGGGCCGCCATCATGCCTTTCCTCAAGTGCTCTGCTTTGTTTTTCCACTATTTAAATGGAG 4585
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4586 TCCCGGCCCCTCCAGACCTTCAAGTTTCTGGAACAAGCCATTTTGAACACTTATGTAACTACCTTTCCCTACCA 4659
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4660 ACCAACCTCATTCACCTTTTTCAAGAAAACAGTGACATCATGAACTCCCTGATTGAAAGTTGGTGCCAGAACAG 4733
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4734 TGAAGTTAAACGGTATCTAAATGGCGAGAGAGGAGCGATAAGCTACCCCAGAGGAGCTAACAAACTGATAGACC 4807
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4808 TTCCAGAGGATTACAGCAGCCTCATTAACCAAGCATCCAATTTCTCGTGCCCCAAATCAGGTGGCGACAAGAGC 4881
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4882 AGAGCTCCTACTCTGTGCCTCGTGTGTGGGAGTCTCCTCTGCTCTCAGAGTTACTGCTGCCAAGCTGAGCTGGA 4955
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4956 GGGTGAGGACGTCGGAGCCTGCACAGCACACACCTACTCCTGCGGCTCCGGGGCCGGCATCTTCCTGAGAGTGC 5029
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5030 GGGAATGTCAGGTGCTATTTTTAGCTGGCAAAACCAAAGGATGTTTTTATTCTCCTCCTTACCTTGACGACTAT 5103
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5104 GGAGAGACCGACCAGGGACTCAGACGAGGAAATCCTTTACATTTATGCCAAGAGCGGTTTCGAAAGATCCAGAA 5177
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5178 GCTCTGGCAGCAGCATAGTATCACAGAGGAGATCGGACACGCGCAGGAGGCTAACCAGACCCTGGTCGGAATTG 5251
Query 1318 -------------- 1317
Sbjct 5252 ACTGGCAGCATTTA 5265
