Nucleotide Global Alignment

Description

Query:
TRCN0000475456
Subject:
XM_017010597.1
Aligned Length:
3806
Identities:
1272
Gaps:
2515

Alignment

Query    1  ----------------ATGGCGTCGGAGCTAGAGCCAGA---------GGT-------------GCAGGCC---  33
                            ||.|||  ||.|..||.|||.||         |||             |||||||   
Sbjct    1  ATGTTCGGCCGAGGAGATTGCG--GGGGTGAGTGCCGGAACCCGGGCGGGTGCGTCTGCCCCTCGCAGGCCGCG  72

Query   34  -------------ATCGA------------CCGGAG--------------CTTGCTGGAA-----TGT-TCGGC  62
                         |.|||            |.||||              |||| .||||     ||| .||||
Sbjct   73  CCTGTGGGGAGGAACCGACTCCTGGACGTCCTGGAGCAGCCCGACCCAGACTTG-GGGAAACAGCTGTGCCGGC  145

Query   63  CGAGGAGATTGC----GGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCAC  132
            |      .|.||    .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  146  C------CTCGCCTTGTGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCAC  213

Query  133  TATGTACCCAAAATCTACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTT  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  214  TATGTACCCAAAATCTACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTT  287

Query  207  GTTGGGACCAATGGAATGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACA  280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  288  GTTGGGACCAATGGAATGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACA  361

Query  281  AACCTTCTCATCTTTGTGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGAT  354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  362  AACCTTCTCATCTTTGTGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGAT  435

Query  355  CCAACTTGTGTTTTGTGCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATC  428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  436  CCAACTTGTGTTTTGTGCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATC  509

Query  429  AGGAGGTGGAGGTTTCTGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAAC  502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  510  AGGAGGTGGAGGTTTCTGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAAC  583

Query  503  TTAACACCTCTGAAATTGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTAT  576
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  584  TTAACACCTCTGAAATTGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTAT  657

Query  577  AACATTTTTGCTATTACGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGA  650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  658  AACATTTTTGCTATTACGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGA  731

Query  651  TTTAGAGATGGTAGAGAAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTACGAACAAG  724
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  732  TTTAGAGATGGTAGAGAAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTATGAACAAG  805

Query  725  TTATTTATACTCTTCAGAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGA  798
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  806  TTATTTATACTCTTCAGAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGA  879

Query  799  GATGGGCGTAGGTCTGTTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATAC  872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  880  GATGGGCGTAGGTCTGTTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATAC  953

Query  873  CAGTAGACAGACAAAGCCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGA  946
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  954  CAGTAGACAGACAAAGCCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGA  1027

Query  947  AACTTTTGTCTTGGCTGGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTA  1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028  AACTTTTGTCTTGGCTGGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTA  1101

Query 1021  CAAGAAGGGCCAGATGGTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGG  1094
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102  CAAGAAGGGCCAGATGGTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGG  1175

Query 1095  TGCTAGGAGTGTATATCATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTG  1168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176  TGCTAGGAGTGTATATCATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTG  1249

Query 1169  TTCGATTTGCAAAAAACTATGAGCGTTTGCAGAGTGATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTC  1242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250  TTCGATTTGCAAAAAACTATGAGCGTTTGCAGAGTGATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTC  1323

Query 1243  GCAGACCTCTCGGTTCAGATATTCACGGTTCCTTCACTTTTCTCTATCTCTGCTGGGCGCAGTGGCTCACCTCT  1316
            ||||||||||||||||||||||||||||||||||||||            ||||   ||.|  .|||||.|.|.
Sbjct 1324  GCAGACCTCTCGGTTCAGATATTCACGGTTCCTTCACT------------TGCT---CGAA--TGCTCATCACA  1380

Query 1317  G-------------------------------------------------------------------------  1317
            |                                                                         
Sbjct 1381  GAAGAAAACTTAATGAGCATTATCATTAAGACTTTTATGGATCATTTGAGACATCGAGATGCCCAGGGCAGATT  1454

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1455  TCAGTTTGAACGATACACTGCTTTACAAGCCTTCAAATTTAGGAGAGTACAGAGCCTTATTTTAGATCTCAAGT  1528

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1529  ATGTGTTAATTAGCAAACCAACTGAATGGTCAGATGAGCTGAGGCAGAAGTTCCTAGAAGGGTTTGATGCCTTT  1602

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1603  TTGGAATTACTAAAATGTATGCAGGGAATGGATCCAATTACACGTCAAGTAGGACAACATATTGAAATGGAACC  1676

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1677  AGAGTGGGAAGCAGCCTTCACACTACAAATGAAATTAACACATGTCATTTCAATGATGCAGGACTGGTGTGCTT  1750

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1751  CAGATGAAAAAGTGTTAATCGAAGCTTACAAGAAATGTCTCGCTGTACTGATGCAGTGTCATGGTGGTTATACT  1824

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1825  GATGGTGAACAGCCAATCACACTAAGCATTTGTGGACATTCAGTGGAAACTATCAGATACTGTGTTTCCCAAGA  1898

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1899  AAAAGTTAGCATTCACCTCCCAGTTTCTCGCTTACTTGCAGGTTTACATGTATTATTAAGCAAAAGTGAAGTGG  1972

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1973  CATATAAATTTCCAGAGCTCCTACCTCTAAGTGAACTTAGCCCACCCATGTTGATAGAACACCCTCTTAGATGT  2046

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2047  CTTGTTCTGTGTGCCCAAGTACATGCCGGAATGTGGAGAAGAAATGGGTTCTCTCTAGTAAACCAGATTTATTA  2120

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2121  CTACCATAATGTGAAATGCAGACGTGAGATGTTTGACAAGGATGTAGTAATGCTTCAGACAGGTGTCTCCATGA  2194

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2195  TGGATCCAAATCATTTCCTGATGATCATGCTCAGCCGCTTTGAACTTTATCAGATTTTCAGTACTCCAGACTAT  2268

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2269  GGAAAAAGATTTAGTTCTGAGATTACCCATAAGGATGTTGTTCAGCAGAACAATACTCTAATAGAAGAAATGCT  2342

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2343  ATACCTCATTATAATGCTTGTTGGAGAGAGATTTAGTCCTGGAGTTGGACAGGTAAATGCTACAGATGAAATCA  2416

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2417  AGCGAGAGATTATCCATCAGTTGAGTATCAAGCCTATGGCTCATAGTGAATTGGTAAAGTCTTTACCTGAAGAT  2490

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2491  GAGAACAAGGAGACTGGCATGGAGAGTGTAATCGAAGCAGTTGCCCATTTCAAGAAACCTGGATTAACAGGACG  2564

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2565  AGGCATGTATGAACTGAAACCAGAATGTGCCAAAGAGTTCAACTTGTATTTCTATCACTTTTCAAGGGCAGAAC  2638

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2639  AGTCCAAGGCAGAAGAAGCGCAACGGAAATTGAAAAGACAAAATAGAGAAGATACAGCACTCCCACCTCCGGTG  2712

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2713  TTGCCTCCATTCTGCCCTCTGTTTGCAAGCCTGGTTAACATTTTGCAGTCAGATGTCATGTTGTGCATCATGGG  2786

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2787  AACAATTCTGCAATGGGCTGTGGAACATAATGGATATGCCTGGTCAGAGTCCATGCTGCAAAGGGTGTTACATT  2860

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2861  TAATTGGCATGGCACTACAAGAAGAAAAACAACATTTAGAGAATGTCACGGAAGAGCATGTAGTAACATTTACC  2934

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2935  TTCACTCAGAAGATATCAAAACCTGGTGAAGCGCCAAAAAATTCTCCTAGCATACTAGCTATGCTGGAAACACT  3008

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3009  ACAAAATGCTCCCTACCTAGAAGTCCACAAAGACATGATTCGGTGGATATTGAAGACTTTTAATGCTGTTAAAA  3082

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3083  AGATGAGGGAGAGTTCACCTACCAGTCCCGTGGCAGAGACAGAAGGAACCATAATGGAAGAGAGTTCAAGGGAC  3156

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3157  AAAGACAAAGCTGAGAGGAAGAGAAAAGCAGAGATTGCCAGACTGCGCAGAGAAAAGATCATGGCTCAGATGTC  3230

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3231  TGAAATGCAGCGGCATTTTATTGATGAAAACAAAGAACTCTTTCAGCAGACATTAGAACTGGATGCCTCAACCT  3304

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3305  CTGCTGTTCTTGATCATAGCCCTGTGGCTTCAGATATGACACTTACAGCACTGGGCCCCGCACAAACTCAGGTT  3378

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3379  CCTGAACAAAGACAATTCGTTACATGTATATTGTGTCAAGAGGAGCAAGAAGTTAAAGTGGAAAGCAGGGCAAT  3452

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3453  GGTCTTGGCAGCATTTGTTCAGAGATCAACTGTATTATCAAAAAACAGAAGTAAATTTATTCAAGATCCAGAAA  3526

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3527  AATATGATCCATTATTCATGCACCCTGATCTGTCTTGTGGAACACACACTAGTAGCTGTGGGCACATTATGCAT  3600

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3601  GCCCATTGTTGGCAAAGGTATTTTGATTCCGTTCAAGCTAAAGAACAGCGAAGGCAACAGAGATTACGCTTACA  3674

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3675  TACGAGCTATGATGTAGAAAACGGAGAATTCCTTTGCCCCCTTTGTGAATGCTTGAGTAATACTGTTATTCCTC  3748

Query 1318  --------------------------------  1317
                                            
Sbjct 3749  TGCTGCTTCCTCCAAGAAATATTTTTAACAAA  3780

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