Nucleotide Global Alignment

Description

Query:
TRCN0000475456
Subject:
XR_001743285.1
Aligned Length:
4527
Identities:
1294
Gaps:
3227

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCCAGAACTACAGTACCCAGAAAGCTCCGCTTCCCCTCCTGGGTGTTATTGCCCCTTTCCTGGTGCAGGACGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGTAGTGGCCAGCGAGAGTGTCAGGCCTGGGGTTTTCTGTGTCCTTCCCTGGGTCAGGGACGAGCCAGTGACTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACTCTTGGGCGCTAAGCTTGGGAGGGAGCGCAGGAGGCCGCTGTCCTTCCTTTCCGGTTCACGTCACCCTTCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTCCCTCTGTTGCTCCACCTGCAGCCACTTGGACGGCTCCGGGACTGATTGCCTGGGGCAGGGGTGGCAGTCGA  296

Query    1  ----------------------------------------------------------------------ATGG  4
                                                                                  ||||
Sbjct  297  GGCCGCCGGGGCCGAGGTGAGGCTGCAGCTCTCCGGGCGGCGGTAGCGCTGGGGAGGAGGAGGAGAGAAGATGG  370

Query    5  CGTCGGAGCTAGAGCCAGAGGTGCAGGCCATCGACCGGAGCTTGCTGGAATGTTCGGCCGAGGAGATTGCG---  75
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct  371  CGTCGGAGCTAGAGCCAGAGGTGCAGGCCATCGACCGGAGCTTGCTGGAATGTTCGGCCGAGGAGATTGCGGGG  444

Query   76  --------------------------------------------------------------------------  75
                                                                                      
Sbjct  445  GTGAGTGCCGGAACCCGGGCGGGTGCGTCTGCCCCTCGCAGGCCGCGCCTGTGGGGAGGAACCGACTCCTGGAC  518

Query   76  ---------------------------------------------------------GGGAAATGGCTGCAAGC  92
                                                                     |||||||||||||||||
Sbjct  519  GTCCTGGAGCAGCCCGACCCAGACTTGGGGAAACAGCTGTGCCGGCCCTCGCCTTGTGGGAAATGGCTGCAAGC  592

Query   93  AACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCACTATGTACCCAAAATCTACTGCAGGGGTCCCAACC  166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCACTATGTACCCAAAATCTACTGCAGGGGTCCCAACC  666

Query  167  CTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTTGTTGGGACCAATGGAATGGTACCTTTGTGGTGAA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTTGTTGGGACCAATGGAATGGTACCTTTGTGGTGAA  740

Query  241  GATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACAAACCTTCTCATCTTTGTGGTCGTGTTTTTAAAGT  314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACAAACCTTCTCATCTTTGTGGTCGTGTTTTTAAAGT  814

Query  315  AGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGATCCAACTTGTGTTTTGTGCATGGAGTGCTTTTTGG  388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGATCCAACTTGTGTTTTGTGCATGGAGTGCTTTTTGG  888

Query  389  GAAGTATTCACAGAGATCATCGATATAGGATGACAACATCAGGAGGTGGAGGTTTCTGTGACTGTGGTGATACT  462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAAGTATTCACAGAGATCATCGATATAGGATGACAACATCAGGAGGTGGAGGTTTCTGTGACTGTGGTGATACT  962

Query  463  GAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAACTTAACACCTCTGAAATTGAGGAAGAAGAGGATCC  536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAACTTAACACCTCTGAAATTGAGGAAGAAGAGGATCC  1036

Query  537  TCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTATAACATTTTTGCTATTACGTTTCGGTATGCAGTAG  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTATAACATTTTTGCTATTACGTTTCGGTATGCAGTAG  1110

Query  611  AAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGATTTAGAGATGGTAGAGAAGAGTGACACCTACTAT  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGATTTAGAGATGGTAGAGAAGAGTGACACCTACTAT  1184

Query  685  TGCATGCTGTTTAATGATGAGGTTCACACCTACGAACAAGTTATTTATACTCTTCAGAAAGCTGTTAACTGTAC  758
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGCATGCTGTTTAATGATGAGGTTCACACCTATGAACAAGTTATTTATACTCTTCAGAAAGCTGTTAACTGTAC  1258

Query  759  ACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGAGATGGGCGTAGGTCTGTTCGATATGGAGATTTTC  832
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGAGATGGGCGTAGGTCTGTTCGATATGGAGATTTTC  1332

Query  833  AGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATACCAGTAGACAGACAAAGCCACTCAAAGTTCAAGTT  906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATACCAGTAGACAGACAAAGCCACTCAAAGTTCAAGTT  1406

Query  907  ATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGAAACTTTTGTCTTGGCTGGGAAGTATTATTGGATA  980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGAAACTTTTGTCTTGGCTGGGAAGTATTATTGGATA  1480

Query  981  TTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTACAAGAAGGGCCAGATGGTGAAAACTCTTCTCTAG  1054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTACAAGAAGGGCCAGATGGTGAAAACTCTTCTCTAG  1554

Query 1055  TGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGGTGCTAGGAGTGTATATCATCAGTTGTTCATGAGC  1128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGGTGCTAGGAGTGTATATCATCAGTTGTTCATGAGC  1628

Query 1129  AGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTGTTCGATTTGCAAAAAACTATGAGCGTTTGCAGAG  1202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTGTTCGATTTGCAAAAAACTATGAGCGTTTGCAGAG  1702

Query 1203  TGATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTCAGATATTCACGGTTCCTT  1276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTCAGATATTCACGGTTCCTT  1776

Query 1277  CACTTTTCTCTATCTCTGCTGGGCGCAGTGGCTCACCTCTG---------------------------------  1317
            ||||            ||||   ||.|  .|||||.|.|.|                                 
Sbjct 1777  CACT------------TGCT---CGAA--TGCTCATCACAGAAGAAAACTTAATGAGCATTATCATTAAGACTT  1833

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1834  TTATGGATCATTTGAGACATCGAGATGCCCAGGGCAGATTTCAGTTTGAACGATACACTGCTTTACAAGCCTTC  1907

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1908  AAATTTAGGAGAGTACAGAGCCTTATTTTAGATCTCAAGTATGTGTTAATTAGCAAACCAACTGAATGGTCAGA  1981

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1982  TGAGCTGAGGCAGAAGTTCCTAGAAGGGTTTGATGCCTTTTTGGAATTACTAAAATGTATGCAGGGAATGGATC  2055

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2056  CAATTACACGTCAAGTAGGACAACATATTGAAATGGAACCAGAGTGGGAAGCAGCCTTCACACTACAAATGAAA  2129

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2130  TTAACACATGTCATTTCAATGATGCAGGACTGGTGTGCTTCAGATGAAAAAGTGTTAATCGAAGCTTACAAGAA  2203

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2204  ATGTCTCGCTGTACTGATGCAGTGTCATGGTGGTTATACTGATGGTGAACAGCCAATCACACTAAGCATTTGTG  2277

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2278  GACATTCAGTGGAAACTATCAGATACTGTGTTTCCCAAGAAAAAGTTAGCATTCACCTCCCAGTTTCTCGCTTA  2351

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2352  CTTGCAGGTTTACATGTATTATTAAGCAAAAGTGAAGTGGCATATAAATTTCCAGAGCTCCTACCTCTAAGTGA  2425

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2426  ACTTAGCCCACCCATGTTGATAGAACACCCTCTTAGATGTCTTGTTCTGTGTGCCCAAGTACATGCCGGAATGT  2499

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2500  GGAGAAGAAATGGGTTCTCTCTAGTAAACCAGATTTATTACTACCATAATGTGAAATGCAGACGTGAGATGTTT  2573

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2574  GACAAGGATGTAGTAATGCTTCAGACAGGTGTCTCCATGATGGATCCAAATCATTTCCTGATGATCATGCTCAG  2647

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2648  CCGCTTTGAACTTTATCAGATTTTCAGTACTCCAGACTATGGAAAAAGATTTAGTTCTGAGATTACCCATAAGG  2721

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2722  ATGTTGTTCAGCAGAACAATACTCTAATAGAAGAAATGCTATACCTCATTATAATGCTTGTTGGAGAGAGATTT  2795

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2796  AGTCCTGGAGTTGGACAGGTAAATGCTACAGATGAAATCAAGCGAGAGATTATCCATCAGTTGAGTATCAAGCC  2869

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2870  TATGGCTCATAGTGAATTGGTAAAGTCTTTACCTGAAGATGAGAACAAGGAGACTGGCATGGAGAGTGTAATCG  2943

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2944  AAGCAGTTGCCCATTTCAAGAAACCTGGATTAACAGGACGAGGCATGTATGAACTGAAACCAGAATGTGCCAAA  3017

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3018  GAGTTCAACTTGTATTTCTATCACTTTTCAAGGGCAGAACAGTCCAAGGCAGAAGAAGCGCAACGGAAATTGAA  3091

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3092  AAGACAAAATAGAGAAGATACAGCACTCCCACCTCCGGTGTTGCCTCCATTCTGCCCTCTGTTTGCAAGCCTGG  3165

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3166  TTAACATTTTGCAGTCAGATGTCATGTTGTGCATCATGGGAACAATTCTGCAATGGGCTGTGGAACATAATGGA  3239

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3240  TATGCCTGGTCAGAGTCCATGCTGCAAAGGGTGTTACATTTAATTGGCATGGCACTACAAGAAGAAAAACAACA  3313

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3314  TTTAGAGAATGTCACGGAAGAGCATGTAGTAACATTTACCTTCACTCAGAAGATATCAAAACCTGGTGAAGCGC  3387

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3388  CAAAAAATTCTCCTAGCATACTAGCTATGCTGGAAACACTACAAAATGCTCCCTACCTAGAAGTCCACAAAGAC  3461

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3462  ATGATTCGGTGGATATTGAAGACTTTTAATGCTGTTAAAAAGATGAGGGAGAGTTCACCTACCAGTCCCGTGGC  3535

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3536  AGAGACAGAAGGAACCATAATGGAAGAGAGTTCAAGGGACAAAGACAAAGCTGAGAGGAAGAGAAAAGCAGAGA  3609

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3610  TTGCCAGACTGCGCAGAGAAAAGATCATGGCTCAGATGTCTGAAATGCAGCGGCATTTTATTGATGAAAACAAA  3683

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3684  GAACTCTTTCAGCAGACATTAGAACTGGATGCCTCAACCTCTGCTGTTCTTGATCATAGCCCTGTGGCTTCAGA  3757

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3758  TATGACACTTACAGCACTGGGCCCCGCACAAACTCAGGTTCCTGAACAAAGACAATTCGTTACATGTATATTGT  3831

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3832  GTCAAGAGGAGCAAGAAGTTAAAGTGGAAAGCAGGGCAATGGTCTTGGCAGCATTTGTTCAGAGATCAACTGTA  3905

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3906  TTATCAAAAAACAGAAGTAAATTTATTCAAGATCCAGAAAAATATGATCCATTATTCATGCACCCTGATCTGTC  3979

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3980  TTGTGGAACACACACTAGTAGCTGTGGGCACATTATGCATGCCCATTGTTGGCAAAGCTAAAGAACAGCGAAGG  4053

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4054  CAACAGAGATTACGCTTACATACGAGCTATGATGTAGAAAACGGAGAATTCCTTTGCCCCCTTTGTGAATGCTT  4127

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4128  GAGTAATACTGTTATTCCTCTGCTGCTTCCTCCAAGAAATATTTTTAACAACAGGTTAAATTTTTCAGACCAAC  4201

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4202  CAAATCTGACTCAGTGGATTAGAACAATATCTCAGCAAATAAAAGCATTACAGTTTCTTAGGAAAGAAGAAAGT  4275

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4276  ACTCCTAATAATGCCTCTACAAAGAATTCAGAAAATGTGGATGAATTACAGCTCCCTGAAGGGTTCAGGCCTGA  4349

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4350  TTTTCGTCCTAAGATCCCTTATTCTGAGAGCATAAAAGAAATGCTAACGACATTTGGAACTGCTACCTACAAGG  4423

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 4424  TGGGACTAAAGGTTCATCCCAATGAAGAGGATCCTCGTGTTCCCATAATGTGTTGGGGTAGCTGCGCGTACACC  4497

Query 1318  -------------  1317
                         
Sbjct 4498  ATCCAAAGCATAG  4510

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