Nucleotide Global Alignment

Description

Query:
TRCN0000475541
Subject:
XM_011250978.2
Aligned Length:
1677
Identities:
1379
Gaps:
159

Alignment

Query    1  ATGGCACGGTTCGGCTTGCCCGCGCTTCTCTGCACCCTGGCAGTGCTCAGCGCCGCGCTGCTGGCTGCCGAGCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CAAGTCGAAAAGTTGCTCGGAAGTGCGACGTCTTTACGTGTCCAAAGGCTTCAACAAGAACGATGCCCCCCTCC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACGAGATC-----AACGGTGATCATTTGAAGATCTGTCCCCAGGGTTCTACCTGCTGCTCTCAAGAGATGGAGG  217
            |.|| |||     ||.|||||.||||||||||||||||||||||.||.|||.|||||.||||||||||||||.|
Sbjct    1  ATGA-ATCATTTAAAAGGTGACCATTTGAAGATCTGTCCCCAGGATTATACATGCTGTTCTCAAGAGATGGAAG  73

Query  218  AGAAGTACAGCCTGCAAAGTAAAGATGATTTCAAAAGTGTGGTCAGCGAACAGTGCAATCATTTGCAAGCTGTC  291
            ||||||||||||||||||||||||||||||||||||..||||||||||||||||||||.|||||||||||..||
Sbjct   74  AGAAGTACAGCCTGCAAAGTAAAGATGATTTCAAAACCGTGGTCAGCGAACAGTGCAACCATTTGCAAGCCATC  147

Query  292  TTTGCTTCACGTTACAAGAAGTTTGATGAATTCTTCAAAGAACTACTTGAAAATGCAGAGAAATCCCTGAATGA  365
            |||||.||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  148  TTTGCATCCCGTTACAAGAAGTTTGATGAATTCTTCAAAGAACTTCTTGAAAATGCAGAGAAATCCCTGAATGA  221

Query  366  TATGTTTGTGAAGACATATGGCCATTTATACATGCAAAATTCTGAGCTATTTAAAGATCTCTTCGTAGAGTTGA  439
            ||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||.|||||||
Sbjct  222  TATGTTCGTGAAGACATATGGCCACTTATACATGCAAAATTCAGAGCTATTTAAAGATCTCTTCGTTGAGTTGA  295

Query  440  AACGTTACTACGTGGTGGGAAATGTGAACCTGGAAGAAATGCTAAATGACTTCTGGGCTCGCCTCCTGGAGCGG  513
            |.||.|||||.||||.|||||||||||||||||||||||||.||||||||||||||||||||||.||||||||.
Sbjct  296  AGCGCTACTATGTGGCGGGAAATGTGAACCTGGAAGAAATGTTAAATGACTTCTGGGCTCGCCTTCTGGAGCGC  369

Query  514  ATGTTCCGCCTGGTGAACTCCCAGTACCACTTTACAGATGAGTATCTGGAATGTGTGAGCAAGTATACGGAGCA  587
            |||||.|||||||||||||||||||||||.||||||||||||||..||||||||||||||||.|||||.|||||
Sbjct  370  ATGTTTCGCCTGGTGAACTCCCAGTACCATTTTACAGATGAGTACTTGGAATGTGTGAGCAAATATACAGAGCA  443

Query  588  GCTGAAGCCCTTCGGAGATGTCCCTCGCAAATTGAAGCTCCAGGTTACTCGTGCTTTTGTAGCAGCCCGTACTT  661
            |||||||||.||.||||||||||||||.|||.||||||||||||||||.||.||.|||||.||||||.|.||.|
Sbjct  444  GCTGAAGCCTTTTGGAGATGTCCCTCGGAAACTGAAGCTCCAGGTTACCCGCGCATTTGTTGCAGCCAGGACCT  517

Query  662  TCGCTCAAGGCTTAGCGGTTGCGGGAGATGTCGTGAGCAAGGTCTCCGTGGTAAACCCCACAGCCCAGTGTACC  735
            ||||||||||||||||.|||||..|.|||||.||.|||||.||.||||||||.|||||||||||.|||||.|||
Sbjct  518  TCGCTCAAGGCTTAGCAGTTGCAAGGGATGTAGTAAGCAAAGTGTCCGTGGTGAACCCCACAGCTCAGTGCACC  591

Query  736  CATGCCCTGTTGAAGATGATCTACTGCTCCCACTGCCGGGGTCTCGTGACTGTGAAGCCATGTTACAACTACTG  809
            |||||.|||.|||||||||||||||||||||||||||||||.||.||||||||||||||.|||||||||||.||
Sbjct  592  CATGCACTGCTGAAGATGATCTACTGCTCCCACTGCCGGGGCCTGGTGACTGTGAAGCCCTGTTACAACTATTG  665

Query  810  CTCAAACATCATGAGAGGCTGTTTGGCCAACCAAGGGGATCTCGATTTTGAATGGAACAATTTCATAGATGCTA  883
            |||||||||||||.||||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||
Sbjct  666  CTCAAACATCATGCGAGGCTGTTTGGCCAACCAAGGAGACCTTGATTTTGAGTGGAACAATTTCATAGATGCTA  739

Query  884  TGCTGATGGTGGCAGAGAGGCTAGAGGGTCCTTTCAACATTGAATCGGTCATGGATCCCATCGATGTGAAGATT  957
            ||||||||||||||||||||||.||||||||||||||||||||.||.||.||||||||||||||||||||||||
Sbjct  740  TGCTGATGGTGGCAGAGAGGCTGGAGGGTCCTTTCAACATTGAGTCCGTTATGGATCCCATCGATGTGAAGATT  813

Query  958  TCTGATGCTATTATGAACATGCAGGATAATAGTGTTCAAGTGTCTCAGAAGGTTTTCCAGGGATGTGGACCCCC  1031
            |||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||.||.||
Sbjct  814  TCTGATGCTATCATGAATATGCAGGATAATAGTGTTCAAGTGTCTCAGAAGGTTTTCCAAGGCTGTGGCCCTCC  887

Query 1032  CAAGCCCCTCCCAGCTGGACGAATTTCTCGTTCCATCTCTGAAAGTGCCTTCAGTGCTCGCTTCAGACCACATC  1105
            .|||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||..|||
Sbjct  888  GAAGCCTCTCCCAGCTGGACGAATTTCTCGCTCCATCTCTGAAAGTGCCTTCAGTGCTCGATTCAGACCTTATC  961

Query 1106  ACCCCGAGGAACGCCCAACCACAGCAGCTGGCACTAGTTTGGACCGACTGGTTACTGATGTCAAGGAGAAACTG  1179
            |.||.|||.|||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  ATCCAGAGCAACGCCCAACCACGGCAGCTGGCACTAGTTTGGACCGACTGGTTACTGATGTCAAGGAGAAACTG  1035

Query 1180  AAACAGGCCAAGAAATTCTGGTCCTCCCTTCCGAGCAACGTTTGCAACGATGAGAGGATGGCTGCAGGAAACGG  1253
            |||||.||.|||||.|||||||||||.||.||.||||.|||||||||.||||||||||||||.||||||||.|.
Sbjct 1036  AAACAAGCTAAGAAGTTCTGGTCCTCTCTCCCAAGCACCGTTTGCAATGATGAGAGGATGGCAGCAGGAAATGA  1109

Query 1254  CAATGAGGATGACTGTTGGAATGGGAAAGGCAAAAGCAGGTACCTGTTTGCAGTGACAGGAAATGGATTAGCCA  1327
            .||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1110  AAATGAGGATGACTGCTGGAATGGCAAAGGCAAAAGCAGGTACCTGTTTGCAGTGACAGGAAATGGATTGGCCA  1183

Query 1328  ACCAGGGCAACAACCCAGAGGTCCAGGTTGACACCAGCAAACCAGACATACTGATCCTTCGTCAAATCATGGCT  1401
            |||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||.||||||||.
Sbjct 1184  ACCAGGGCAACAACCCAGAAGTCCAGGTTGACACCAGCAAGCCAGACATACTGATCCTTCGTCAGATCATGGCC  1257

Query 1402  CTTCGAGTGATGACCAGCAAGATGAAGAATGCATACAATGGGAACGACGTGGACTTCTTTGATATCAGTGATGA  1475
            |||||.||.||||||||.||.|||||||||||.||||||||.||.|||||||||||||||||.|||||||||||
Sbjct 1258  CTTCGGGTTATGACCAGTAAAATGAAGAATGCTTACAATGGAAATGACGTGGACTTCTTTGACATCAGTGATGA  1331

Query 1476  AAGTAGTGGAGAAGGAAGTGGAAGTGGCTGTGAGTATCAGCAGTGCCCTTCAGAGTTTGACTACAATGCCACTG  1549
            .|||||||||||.|||||||||||.||.|||||.|||||||||||||||||.|||||.||.|||||.|||||||
Sbjct 1332  GAGTAGTGGAGAGGGAAGTGGAAGCGGATGTGAATATCAGCAGTGCCCTTCGGAGTTCGAGTACAACGCCACTG  1405

Query 1550  ACCATGCTGGGAAGAGTGCCAATGAGAAAGCCGACAGTGC---TGGTGTCCGTCCTGGGGCACAGGCCTACCTC  1620
            |||||.||||||||||||||||.||||||||.||||||||   |||||.||.|.|.|.||||.||.||||||||
Sbjct 1406  ACCATTCTGGGAAGAGTGCCAACGAGAAAGCTGACAGTGCCGGTGGTGCCCATGCAGAGGCAAAGCCCTACCTC  1479

Query 1621  CTCACTGTCT-TCTGCATCTTGTTCCTGGTTATGCAGAGAGAGTGGAGA  1668
            |||.||| || ||||||||.||||.||.|.|.|||||.|||||||||||
Sbjct 1480  CTCGCTG-CTCTCTGCATCCTGTTTCTCGCTGTGCAGGGAGAGTGGAGA  1527

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