Nucleotide Global Alignment
Description
- Query:
- TRCN0000475543
- Subject:
- XM_011526529.3
- Aligned Length:
- 2437
- Identities:
- 1383
- Gaps:
- 1031
Alignment
Query 1 ATGGACCGCAGCCTGCCAGTTTTCTCCATTCAAGATAGTCCCTTTGGAGATGCGCCCCTGGGTCGAAGCCACTA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGACCGCAGCCTGCCAGTTTTCTCCATTCAAGATAGTCCCTTTGGAGATGCGCCCCTGGGTCGAAGCCACTA 74
Query 75 CTGGCCATCCCAGAGCCAGACCTGGTGTCCCAAGACCCTGAGCCCATCCAGGTCTCAGAGATCCAGGCTCCCAC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTGGCCATCCCAGAGCCAGACCTGGTGTCCCAAGACCCTGAGCCCATCCAGGTCTCAGAGATCCAGGCTCCCAC 148
Query 149 AAGCTCCCAAGGCTCTAGCCACAGGTCCCAACTCCCCTGAGCTGTTTGAGGAGTCCTGGCCATCCAGTTCAGGG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AAGCTCCCAAGGCTCTAGCCACAGGTCCCAACTCCCCTGAGCTGTTTGAGGAGTCCTGGCCATCCAGTTCAGGG 222
Query 223 ACCCCCTCCCTGCCCAGCACCACTGAGGGACAGATGTGGGCCTCCCCAGCACCCACCCTGATTGACAGCGGGGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACCCCCTCCCTGCCCAGCACCACTGAGGGACAGATGTGGGCCTCCCCAGCACCCACCCTGATTGACAGCGGGGA 296
Query 297 CTCCGTGGTGGCCAAGTATATAAACAGGTTCCGCCAGGCTCAGCCCACCAGTCGAGAGGAGCGCCAGCCTGCAG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCCGTGGTGGCCAAGTATATAAACAGGTTCCGCCAGGCTCAGCCCACCAGTCGAGAGGAGCGCCAGCCTGCAG 370
Query 371 GCCCAACCCCAGCTGACTTTTGGTGGCTGCAGTCTGACTCTCCAGACCCCAGCAGTCAAAGTGCAGCAGCAGGA 444
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 371 GCCCAACCCCAGCTGACTTTTGGTGGCTGCAGTCTGACTCTCCAGACCCCAGCAGTCAAAGT---GCAGCAGGA 441
Query 445 GCCAACAAACCAGAAGGAAGACCCCATACAGCTGTCCCTACTGCGGTCAACGTGACCAGTGCATCCCATGCTGT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 GCCAACAAACCAGAAGGAAGACCCCATACAGCTGTCCCTACTGCGGTCAACGTGACCAGTGCATCCCATGCTGT 515
Query 519 GGCTCCCCTTCAGGAAATAAAGCAGAACCTCCACACATGGAACTCATCCCTGCTGGACCTGGAGACGCTGAGCC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 GGCTCCCCTTCAGGAAATAAAGCAGAACCTCCACACATGGAACTCATCCCTGCTGGACCTGGAGACGCTGAGCC 589
Query 593 TACAGAGCAGAGCTGCCAGGCTGCTCAAACGCAGCAAAGCCTCCATCTCCTCCTCCTCCTCCCTCAGCCCCAGC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 TACAGAGCAGAGCTGCCAGGCTGCTCAAACGCAGCAAAGCCTCCATCTCCTCCTCCTCCTCCCTCAGCCCCAGC 663
Query 667 GATGCCAGCACTTCCTCATTCCCCACCAGCTCTGATGGCCTCTCTCCCTTCTCGGAGACCTTCATCCCTGACTC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664 GATGCCAGCACTTCCTCATTCCCCACCAGCTCTGATGGCCTCTCTCCCTTCTCGGAGACCTTCATCCCTGACTC 737
Query 741 CAGCAAGGGCCTTGGCCCCAGGGCACCCGCATCCCCGGCACCAGCCCAGGCCCAGACCCCCACCCCTGCTCCAG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 CAGCAAGGGCCTTGGCCCCAGGGCACCCGCATCCCCGGCACCAGCCCAGGCCCAGACCCCCACCCCTGCTCCAG 811
Query 815 CCCCAGCCTCCTCCCAAGCACCCCTTCGGCCAGAGGATGACATTCTGTACCAGTGGCGGCAGCGGCGGAAGCTT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 CCCCAGCCTCCTCCCAAGCACCCCTTCGGCCAGAGGATGACATTCTGTACCAGTGGCGGCAGCGGCGGAAGCTT 885
Query 889 GAACAGGCTCAGGGAAGCAAGGGTGACAGAGCTTGGGTGCCGCCTCTGACCCCTGCCCTCCGCACGTT------ 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 GAACAGGCTCAGGGAAGCAAGGGTGACAGAGCTTGGGTGCCGCCTCTGACCCCTGCCCTCCGCACGTTGATCTC 959
Query 957 -------------------------------------------------------------------------- 956
Sbjct 960 TCTTATCTGTCTACAGACCTCTCCTGCTCCAGTGGAGACCCTCAGTTCTCTGGGGACCCAGCCTAACCATGTCC 1033
Query 957 -------------------------------------------------------------------------- 956
Sbjct 1034 CACTGTGGAGCAGTGTGGCCCAGCCTGGTCCACCAGAGGCCTTCTATGTGGAGAGGCCTCCTTTTCCCTCAGTG 1107
Query 957 -------------------------------------------------------------------------- 956
Sbjct 1108 TCCTCTCCACACATCTTTTGGGCCCCCAGCTCCCACGGGTTCTTCTGGGCCCCACAGTCTGGGCCTTGGGTATC 1181
Query 957 -------------------------------------------------------------------------- 956
Sbjct 1182 CCTTGGGGCTGTTCCTCCCACGCAGCAGGCCTCCACCCTAGCACATCTGGGCTCTACCCTCGCGCCCCCGGCTT 1255
Query 957 -------------------------------------------------------------------------- 956
Sbjct 1256 CCCTGGCCTCCACCCTCGAACCCCCGGCCTCCACCCCAGCTCCCCTGGCCTCCACCCTTGCACCCCCAGCCTCC 1329
Query 957 -------------------------------------------------------------------------- 956
Sbjct 1330 ACCCCGGCTCCCCTGGCCTGTACCCCTGCACCTCCAGCCTCCACCCTCGCATCCCCAGCTGTCCCCCAGGGCCT 1403
Query 957 -------------------------------------------------------------------------- 956
Sbjct 1404 GCCCATCCCTGACCCAAGCAGCTGTGCCCAGCCTAAGAGCCTGGGGCCCAAGTCTCGGAGGAGCAGAGCCCCTC 1477
Query 957 -------------------------------------------------------------------------- 956
Sbjct 1478 GCCCAGAGGCTGCCGAGCAAGTCCCTGCAGCTGGCCAGGGACCTGGCCCTCAGCTCAGGGGTGTCCTGGGCCAG 1551
Query 957 -------------------------------------------------------------------------- 956
Sbjct 1552 GTAGTGGCAGCTCGGCTGTTCCCTGACAGCCTGGAGGACACGCCTCCTCACTTCGAGGGCCCCCCTCCACCCAA 1625
Query 957 -------------------------------------------------------------------------- 956
Sbjct 1626 GGCTGGATCTCCGAAAGTCCAGGCCACACAACCCCAAACCAAGGTCACTCCCCCTCCATCTGAATCCCAGTGTC 1699
Query 957 -------GGCCGAGTCTCTGAAAGCCAAGGCCTTGCCGCCCGCAGCGGGGTCAGTGATACGGAAGAGCGAAGCC 1023
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1700 GGGCCAAGGCCGAGTCTCTGAAAGCCAAGGCCTTGCCGCCCGCAGCGGGGTCAGTGATACGGAAGAGCGAAGCC 1773
Query 1024 ACTCCTTCCCCTGGAGCCTGCCTGCAGCCCGAGGTCCCACTCTCTCCAGCTGAGCAGGCAACCACAGTCAAGGC 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 ACTCCTTCCCCTGGAGCCTGCCTGCAGCCCGAGGTCCCACTCTCTCCAGCTGAGCAGGCAACCACAGTCAAGGC 1847
Query 1098 CTCGCCGCCAGCCTTCCAGGTGGGGTCTCCGGAGGCCCTGGCCCCGCCCCCGCCCGCTGCTGACCACGCCCCCT 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848 CTCGCCGCCAGCCTTCCAGGTGGGGTCTCCGGAGGCCCTGGCCCCGCCCCCGCCCGCTGCTGACCACGCCCCCT 1921
Query 1172 CGGAGGCCCTGCTTGCCCAGGCCGCCCTGCTGCTGCAGGCTGCAGAAGACTCCGACGGCAGCGAGTTCCAGGAC 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 CGGAGGCCCTGCTTGCCCAGGCCGCCCTGCTGCTGCAGGCTGCAGAAGACTCCGACGGCAGCGAGTTCCAGGAC 1995
Query 1246 GATCCCGTGCTGCAGGTGCTAAGAGCCCATAGGGCAGAGCTGAGTCGGCAGAAAAGGGAAGCGGATGCCCGATT 1319
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |..|.|.||
Sbjct 1996 GATCCCGTGCTGCAGGTGCTAAGAGCCCATAGGGCAGAGCTGAGTCGGCAGAAAAG---------TTACTGGTT 2060
Query 1320 ATC------------GTTCCTG-TTGGACCAGGCTGAAGACC-TGGGATCTTG-------------GTCCCCTC 1366
||| || || ||||| |||.|| .|||.||.|| .|.|||.|
Sbjct 2061 ATCTGTGAGAAAGGGGT---TGTTTGGA--------AAGGCCAAGGGGTCATGCCAATTTAAGGAAATGCCCCC 2123
Query 1367 CAGCC-------------GGGTC------GCCCCCTAGGTCC---------CCAAGGAGGCTGCTAAGAAG--- 1409
||.|| ||.|| ||||||.| || |||.||| ||.|||
Sbjct 2124 CATCCTCCGCTGCCCCATGGCTCTGCCCTGCCCCCCA---CCCCTTCCTGACCACGGA-------AACAAGATC 2187
Query 1410 --------GGAAGGAGATTCCCTGGAGGC-----------CAG--AAGACTT---------------------- 1440
||....|..||||.||| ||| ||| |||||||
Sbjct 2188 TCCTTTCTGGTTATATCTTCCTTGG-GGCAGAGGGAGTTTCAGACAAGACTTCTGGCAAGACTGGGACCCACCT 2260
Query 1441 -------------------------------------------------------------------------- 1440
Sbjct 2261 TATCTGGCTTCACTCAGGAGCCCTGGCTCAAATGGACCAAAGGACTGCCCTCCACGGAGGAAGCTACTAGGGTC 2334
Query 1441 --------------------------------------------------------------------- 1440
Sbjct 2335 ATCAGAGTGTTGGATGATGGTCAGGCTATAGCCCACACATGCTTGAGCAGCAGCAGCATCTGGTGCAGC 2403
