Nucleotide Global Alignment

Description

Query:
TRCN0000475780
Subject:
XM_011246973.2
Aligned Length:
920
Identities:
561
Gaps:
289

Alignment

Query   1  ATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTTCACAGAGTGCAAATTCACCTGCACCAGTGGTAAATGCTT  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  GTATCTTGGTTCGCTGGTCTGTAACCAACAGAACGACTGTGGGGACAACAGTGACGAAGAGAACTGTCTCCTGG  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  TGACCGAGCACCCGCCTCCGGGCATCTTCAACTCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTG  222
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 223  GTCACGGTGATGGTGGTGGTCATCGTCTGCCTGCTGAACCACTACAAAGTCTCCACGCGGTCCTTCATCAACCG  296
                    ||||||||||||.|.||||||||.|||||||||||||||||||||||.||.||||||||||||||
Sbjct   1  ---------ATGGTGGTGGTCGTTGTCTGCCTACTGAACCACTACAAAGTCTCCACACGCTCCTTCATCAACCG  65

Query 297  CCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGC------------------------------------  334
           |||.||||||||||.|||.|.||||||||||||||.||                                    
Sbjct  66  CCCCAACCAGAGCCAGAGACAGGAGGACGGGCTGCAGCCGGAAGGATCCCTGTGGCCTTCTGATAGCTCCGTGC  139

Query 335  ------------------AGATCATGCATGCCCCGCGGTCCAGGGACAGGTTCACAGCGCCGTCCTTCATCCAG  390
                             ||||||||..||||||.|||..||||||.|||||.||..|.||.||.|||||||||
Sbjct 140  AGCGCCCAGGGGCTTCAGAGATCATGTGTGCCCCACGGGGCAGGGATAGGTTTACTACCCCATCTTTCATCCAG  213

Query 391  AGGGATCGCTTCAGCCGCTTCCAGCCCACCTACCCCTATGTGCAGCACGAGATTGATCTT-CCTCCCACCATCT  463
           |||||||..|||||.||.|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 214  AGGGATCCATTCAGTCGTTTCCAGCCCACCTACCCCTATGTGCAGCACGAGATTGA-CTTGCCTCCCACCATCT  286

Query 464  CCCTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGGACCCTGAACAGCAG  537
           |||||||.|||||.||.|||||.|||||||||||.||.||||||||.||.||||||||||||||.||.||||||
Sbjct 287  CCCTGTCAGACGGGGAGGAGCCGCCTCCTTACCAAGGACCCTGCACGCTACAGCTCCGGGACCCAGAGCAGCAG  360

Query 538  ATGGAACTCAACCGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATATTTGACAGTGATTTAATAGACATTGC  611
           ||||||||||||||||||||||||||||||||.|||||.||||||.|.|||||||||||.||.|||||||||.|
Sbjct 361  ATGGAACTCAACCGAGAGTCCGTGAGGGCCCCGCCCAATCGAACCGTTTTTGACAGTGACTTGATAGACATTTC  434

Query 612  TATGTATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCATCAGTGCAAGC-ACCTGCAGCAGTAACGGG  684
           ||||||.|.||||||.|||||||||||.||||||.|||||||||||||.|| ||| |||||.|||||||||||.
Sbjct 435  TATGTACAACGGGGGACCATGCCCACCAAGCAGCCACTCGGGCATCAGCGC-AGCTACCTGTAGCAGTAACGGA  507

Query 685  AGGATGGAGGGGCCACCCCCCACATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTCCATCACCA  758
           ||.|||||||||||||||||.||.|||||||||||||||||||||.||||||||.||||.|||.||||||||||
Sbjct 508  AGAATGGAGGGGCCACCCCCGACCTACAGCGAGGTGATGGGCCACTACCCAGGCACCTCGTTCTTCCATCACCA  581

Query 759  GCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTACCCATCA  832
           ||.|||||||.||||||||||||||||||..||||||||||.||||||..|||||.||||||||||||||||||
Sbjct 582  GCACAGCAACACACACAGGGGCAGCAGACCACAGTTTCAGCCGAACAACTCAGAGGGCACAATAGTACCCATCA  655

Query 833  AAGGCAAAGATAGGAAGCCTGGGAACCTGGTC  864
           |.||||||||.||||||||.|||.||||||||
Sbjct 656  AGGGCAAAGACAGGAAGCCGGGGGACCTGGTC  687