Nucleotide Global Alignment
Description
- Query:
- TRCN0000475880
- Subject:
- XR_001783779.1
- Aligned Length:
- 3237
- Identities:
- 1310
- Gaps:
- 1848
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGGTGGGAGGGGGGGGTCTAGGGAGAACCTGAAGGGGACAGGGCAGAAGGGACCCCCGAAGCCCTGCCGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAGAGATCAAGCATTTGGCATCAGGGATCTTCGGACCCAGCAGAAGGATCAGCCACAGGGAGGTGTCTTCCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGAAGCCAACGAGAGAGTCACCTGCCCCACATCAGGAGCAGGGACCCCCTCATGACGCTGCTGGCAACCATAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGTCCCCTAGCCCCTCAGCCTCTTTCCTATCGCCCTCTTCTGACTTTACCCCATCTCCTTTGGCATCTGTGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTGCTCCCGCCCTCTGAGCTCCACCGTTCCAGCTACCACCCAAACGCCCCAGGGTTTGGTCACCCTGACCCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCCTGGGATATTTGCCAGATCTCTGGGAGGGAGATCCTTTGCTTGGGCTATGCCCCTGGTGGCCTGACACTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGCCTAGACCCCTGACCCCTAGCCCTCAACTCCCCAGGCCTCCTTTGTGTGAAGAGCCCTCCTCTGCTCAGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGTGGTTGGGGGCCAAAGGAAAAGCTGGCCCTGCTGGGCCCCTGGGCCCTACCACCTGCCTCCTGGTTGGGCA 592
Query 1 -----------------------------------------------------------------ATGAAGGAG 9
|||||||||
Sbjct 593 GCTTCCCTTGTCTTTGGTCCTCTCCCTGCTCCCCCACCCCCGGCCCCTCCTCCTGGGCCGCCCCAATGAAGGAG 666
Query 10 CCGGATGCCATCAAGCTGTTTGTGGGGCAGATCCCGAGGCACCTGGAGGAGAAGGACCTGAAGCCCATCTTCGA 83
||.||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||
Sbjct 667 CCAGATGCCATCAAGCTGTTTGTGGGGCAGATCCCGAGGCATCTGGAGGAAAAGGACCTGAAGCCCATCTTCGA 740
Query 84 ACAGTTTGGTCGGATCTTTGAGCTGACTGTCATCAAGGACAAGTACACCGGGCTGCACAAGGGATGTGCCTTCC 157
.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 741 GCAGTTTGGTCGGATCTTCGAGCTGACTGTCATCAAGGACAAGTACACCGGGCTGCACAAGGGATGTGCTTTCC 814
Query 158 TGACATACTGTGCCCGGGATTCAGCCCTGAAGGCCCAGAGCGCCCTGCACGAACAGAAGACGCTTCCAGGGATG 231
||||.||||||||.||.|||||||||||||||||||||||.||||||||||||||||||||.||.|||||||||
Sbjct 815 TGACGTACTGTGCTCGCGATTCAGCCCTGAAGGCCCAGAGTGCCCTGCACGAACAGAAGACTCTCCCAGGGATG 888
Query 232 AACAGGCCGATCCAGGTCAAGCCAGCCGACAGCGAGAGCCGAGGAGAAGACCGGAAGCTCTTTGTGGGGATGCT 305
||||||||||||||||||||||||||||||||||||||.||||| |||||||||||||||||||||.|||||
Sbjct 889 AACAGGCCGATCCAGGTCAAGCCAGCCGACAGCGAGAGTCGAGG---AGACCGGAAGCTCTTTGTGGGCATGCT 959
Query 306 AGGGAAGCAGCAGACAGATGAGGACGTCCGGAAGATGTTTGAGCCCTTCGGGACCATCGACGAGTGCACTGTGC 379
|||.||||||||||||||||||||.|||||||||||||||||.||.||.|||||.||.||||||||||||||||
Sbjct 960 AGGAAAGCAGCAGACAGATGAGGATGTCCGGAAGATGTTTGAACCATTTGGGACTATAGACGAGTGCACTGTGC 1033
Query 380 TCCGGGGGCCAGATGGCACCAGCAAAGGCTGCGCCTTCGTGAAGTTCCAGACCCACGCTGAGGCCAAGGCGGCC 453
|||||||||||||.||.||||||||||||||.|||||.||||||||||||||.||||||||||||.||||.|||
Sbjct 1034 TCCGGGGGCCAGACGGTACCAGCAAAGGCTGTGCCTTTGTGAAGTTCCAGACTCACGCTGAGGCCCAGGCAGCC 1107
Query 454 ATCAACACCCTTCACAGCAGCCGGACCCTGCCAGGTGCCTCGTCCAGCCTGGTGGTGAAGTTTGCTGACACTGA 527
|||||||||||||||||||||||||||||.||.||||||||.||||||||||||||.||||||||||||||.||
Sbjct 1108 ATCAACACCCTTCACAGCAGCCGGACCCTACCGGGTGCCTCATCCAGCCTGGTGGTAAAGTTTGCTGACACGGA 1181
Query 528 GAAGGAGCGAGGTCTCCGCCGCATGCAGCAGGTGGCCACCCAGTTGGGCATGTTCAGCCCCATCACCCTCCAGT 601
||||||||||||||||||.||.||||||||||||||.||||||.||||||||||||||||.|||.|||||||||
Sbjct 1182 GAAGGAGCGAGGTCTCCGTCGAATGCAGCAGGTGGCTACCCAGCTGGGCATGTTCAGCCCGATCGCCCTCCAGT 1255
Query 602 TTGGAGCCTACAGCGCCTACACCCAGGCCCTGATGCAGCAGCAGGCGGCCCTGGTAGCGGCTCACAGTGCCTAC 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1256 TTGGAGCCTACAGCGCCTACACCCAGGCCCTGATGCAGCAGCAGGCGGCCCTGGTAGCAGCTCACAGTGCCTAC 1329
Query 676 CTCAGCCCCATGGCCACCATGGCTGCCGTGCAGATGCAGCACATGGCTGCCATCAATGCCAATGGCCTCATCGC 749
||||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1330 CTCAGCCCTATGGCCACCATGGCTGCCGTGCAGATGCAGCACATGGCTGCCATCAGTGCCAATGGCCTCATCGC 1403
Query 750 CACCCCCATCACCCCATCCTCAGGAACCAGCACCCCTCCTGCCATCGCTGCCACGCCTGTCTCTGCCATTCCGG 823
||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||.|
Sbjct 1404 CACCCCCATCACTCCATCCTCAGGAACCAGCACCCCTCCTGCCATTGCTGCCACGCCCGTCTCTGCCATCCCTG 1477
Query 824 CTGCCCTGGGCGTCAACGGCTACAGCCAGGTGCCCACCCAGCCCACTGGGCAGCCTGCCCCTGATGCTCTGTAT 897
|||||.|||||||||||||||||||||.|||||||||||||||.||.||||||||||||||.||||||||||||
Sbjct 1478 CTGCCTTGGGCGTCAACGGCTACAGCCCGGTGCCCACCCAGCCTACAGGGCAGCCTGCCCCGGATGCTCTGTAT 1551
Query 898 CCCAACGGGGTTCACCCCTACCC--------------------------------------------------- 920
|||||||||||||||||.|||||
Sbjct 1552 CCCAACGGGGTTCACCCTTACCCAGGTGGGGCTCTCTGCCTGCCCACCTTGCTCCATCAGCCACCCGGGCCACT 1625
Query 921 -----------------------------------------------------AGCCCAGAGCCCCGCGGCCCC 941
||||||||||||.||.|||||
Sbjct 1626 ACTCCCATTGCTGGCAGCCATGGCTCACCTTCCCTCTCCAACCTCAGGGCTTAAGCCCAGAGCCCGGCAGCCCC 1699
Query 942 CGTGGACCCCCTGCAGCAGGCCTACGCGGGGATGCAGCACTACA---CAGCCTACCCAGCAGCCTACAGCCTGG 1012
|||||||||.||.|||||||||||.||.||.||||||||||||| ||||.|||||.||||||||||||||||
Sbjct 1700 CGTGGACCCTCTCCAGCAGGCCTATGCAGGAATGCAGCACTACACAGCAGCGTACCCCGCAGCCTACAGCCTGG 1773
Query 1013 TTGCACCTGCGTTCCCGCAGCCTCCAGCCCTGGTCGCCCAGCAGCCCCCACCACCACCTCAACAGCAGCAGCAG 1086
||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||.|||||||||
Sbjct 1774 TTGCACCTGCGTTCCCGCAGCCTCCAGCCCTGGTTGCCCAGCAGCCCCCACCACCACCTCAGCAACAGCAGCAG 1847
Query 1087 CAGCAGCAGCAGCAACAG---CAGCAGCAGCAAAGAGAAGGCCCTGATGGCTGCAACATCTTCATCTACCACCT 1157
|||||||||||||||||| ||||||||||||.|.||||||||||||||||||||||||||||||||||||||
Sbjct 1848 CAGCAGCAGCAGCAACAGCAACAGCAGCAGCAACGGGAAGGCCCTGATGGCTGCAACATCTTCATCTACCACCT 1921
Query 1158 GCCCCAGGAGTTCACTGACTCAGAGATCCTCCAGATGTTTGTCCCCTTTGGCCACGTCATCTCAGCCAAAGTCT 1231
|||||||||||||||.|||||||||||||||||||||||||||||.|||||.||.|||||||||||||||||||
Sbjct 1922 GCCCCAGGAGTTCACAGACTCAGAGATCCTCCAGATGTTTGTCCCTTTTGGTCATGTCATCTCAGCCAAAGTCT 1995
Query 1232 TTGTTGACCGAGCCACCAATCAAAGCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGCCAGTGCCCAGGCT 1305
||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 TTGTTGACCGGGCCACCAATCAGAGCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGCCAGTGCCCAGGCT 2069
Query 1306 GCCATCCAGGCCATGAATGGCTTCCAGATCGGCATGAAGCGCCTCAAAGTCCAGCTAAAGCGGCCTAAGGATGC 1379
|||||||||||.|||||.||.||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 GCCATCCAGGCTATGAACGGTTTCCAGATTGGCATGAAGCGCCTCAAAGTCCAGCTAAAGCGGCCTAAGGATGC 2143
Query 1380 CAACCGGCCCTAC------------------------------------------------------------- 1392
.|||.||||||||
Sbjct 2144 AAACAGGCCCTACTAAGGGCTTCAGGTCTGGAGATACCAGAGGAAGGGGCACTTCAGTATACCCTCTTCCTATG 2217
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2218 ACTGGCCCTGGCCTTCTCTGCACATCTGCCCCAGGCCTTGATTGGACTCTGGGGCAAGAGCTGCTTCATGGTCC 2291
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2292 GAGGGCCCAGGACCTGGCTCACTCCCACCATCTTGCCTCTCTGAAGGGCCATGGTTTTGCTTCCCTGGCTTCAA 2365
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2366 GAGCCTATTTCCTCCCCAGTGCCCTTTTGGCCTTTGTGAGGAAGCAAGGAATAGGCTTGAAGGTTCAGGGGCAT 2439
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2440 CTGCCTTCTGCTAAGGCTCCTGGATGAGCCTCTGTGCCCACTGCTGGCCCTTGCCTCCCCTCAGTGGCCTGCAG 2513
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2514 TAGCTGTGCAGGCTCGGAAGGGCAGCAGGACACTCTCCTCTTTCCCAAGCACCCTCCCCCTTGCCTCTCCCCAC 2587
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2588 GGCAGGGCCTTCTCAGAAGCCCTGCCTTCTCAGAAGCTGGCTCCCACGTTTCTCCCCACCCTCAGCTAGAGGTA 2661
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2662 GGAGATCTCCAAACCCCGGGCTCTCAGCCCTAAAACTCACTGCCTTCCCCAAGAGCCCCCTCCAAGGAGGGTGT 2735
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2736 GTGTGTGGGGGGGGGGGGGCCTGAGGGCTGCCTCTCTGCCAGTCAGTCACAGAGACCCTCCTTTCATGAGGAAA 2809
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2810 AGACCTCTCCCTGAGTCCCTAAATATGTTTACAGTCTCTGCTGGCCCCTCCATGTAAATACCATGACCACCAGG 2883
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2884 GCTTTAATCAGCCCACCCAGCCAGACGCTGCCATCTCTCTTTCTGGGAGTTTAGACAATGCTGCCCTTGGATTT 2957
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2958 TGTTTTTTTCTTTTTTTCCTCTCTTGATTTCTCCCTTTGCTTTGGGGGTAATTGGGTATTTGGGGGAAGGGTAT 3031
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 3032 GGGGAGGGCTAAAGGGGTTTATTACCTGATCATTTTCTTTAGGAAGAGGTTCTAGGGAAAAAAACATGGGGTGG 3105
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 3106 GGTGGGGAGGGTAAAGGATAAGAAGGGGGAATCAATTTCTGACAGTTCTCTACTCTTATTTATTGAGTTTTACT 3179
Query 1393 ------------------------------------------------------- 1392
Sbjct 3180 TTTAAAGAGTTGGTCTTTTCTGTCTAAATAAAGAAAAAACATTTGAAAGCATCAA 3234
