Nucleotide Global Alignment
Description
- Query:
- TRCN0000475906
- Subject:
- NM_001285479.1
- Aligned Length:
- 1673
- Identities:
- 914
- Gaps:
- 658
Alignment
Query 1 ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT 74
|||||.|||||||.||||||||||||||||.||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1 ATGGCAACTGATATGTCTCAAGGTGAACTCATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGAT 74
Query 75 CCACGCGGACAAGTTAGGTGAG---GTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGG 145
|||||||||||||||||||||| |.||||||||.|||||||||.||.||||||.|.||||||||||||||||
Sbjct 75 CCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCACCATGCCTATACGTCGAGCCGTGAATTCTACCCGGG 148
Query 146 AAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCT 219
|||||||.|||||||||||.|||||||||||||||||||||||.|||||||||||...||||||||||||||||
Sbjct 149 AAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACCAGAACCAGATGGAAGTTCAGAGGAATCT 222
Query 220 GTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGA 293
.||||.||||||||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||
Sbjct 223 ATCTCTACTGTAGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGA 296
Query 294 ACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGT 361
.|||||||.||.||||||||||| |.||.||||||.||||||||.||||||||||||||||.|||||||
Sbjct 297 GCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGATCAGT 370
Query 362 CTAAAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGG 435
||||||||||||||||||||||||||||.||.||||||.|||||||.||.||.|||||||||||||||||||||
Sbjct 371 CTAAAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGG 444
Query 436 GCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGC 509
|||||||.||||||.||.||||||||.||||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct 445 GCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGC 518
Query 510 ATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGC 583
||||||||||||||.|||.||.||.||||||||.||||||||.||||||||.||||||||.||.|||||||..|
Sbjct 519 ATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTC 592
Query 584 TGGAGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAA 657
|||||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||||||||||||.||||||.|||
Sbjct 593 TGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGAGGAGTCATCAGACAGGTAAAA 666
Query 658 GGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAA 731
|||||||||||.|||||.||||||||||||||.|||||||| ||||.|||||||||||||||.|||||||||
Sbjct 667 GGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACCTCAGAAATCCAAAAACAGAAA 737
Query 732 GAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCC 805
|.||||.||..|||||||||||||||||||||||.||||.|||||.|||||..||||.||||||||.|
Sbjct 738 ------GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGTTGGCTTTTACTCGGC 805
Query 806 TTTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTG 879
|.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.||||||
Sbjct 806 TCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTATTACCCTAAGCTCAGAGTG 879
Query 880 GACATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGG 953
|||||||||||.|||.||||||||||.|||||||||.|||||||||||||.||||||.|.||.|||||||||||
Sbjct 880 GACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGG 953
Query 954 CAAAGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC--------GTG--------------- 996
|||.|||||||||||||||||.| |||||| ||||....||| |||
Sbjct 954 CAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGGGTGGAAGCCTGATGGAAT 1027
Query 997 ------------------TTGC--CCAGG-------------------------CTACTCTTGAA-------CT 1018
|||| |||.| ||.||| |||| .|
Sbjct 1028 ATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACTGCTC-TGAAGAAGTATGT 1100
Query 1019 CCTGGGTTCAG--------------------------------------------------------------- 1029
||||| ||
Sbjct 1101 CCTGG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAACCCTGCAGAAATGT 1170
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1171 GAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGTCCTTCCCCTACTA 1244
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1245 CCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAAGATGACGATGACG 1318
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1319 ATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAG 1392
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1393 TCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGG 1466
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1467 GAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCTCTCCCT 1540
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1541 CAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAGCGAAACTGCCC 1614
Query 1030 --------------------------------------------- 1029
Sbjct 1615 GGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG 1659
