Nucleotide Global Alignment
Description
- Query:
- TRCN0000475906
- Subject:
- XM_006538567.4
- Aligned Length:
- 1768
- Identities:
- 854
- Gaps:
- 803
Alignment
Query 1 --------------ATGG--CGACTGATACGTCTC-------------------AAGGTGAACTCGTC--CA-- 35
.||| ||||| |.||.|.| |..||.||||.||| ||
Sbjct 1 ATGCTCCGAGGCCTGTGGCCCGACT--TCCGCCGCGCCCTCCTCCCCTCGGCCTACTGTCAACTTGTCTTCAAG 72
Query 36 -----TCCTAA-------GGCACTCCCACTTATAGT-AGGAGCT------------------CAGCTGATCCAC 78
|.|.|| ||||| |||| ||..||| |.|||..|||.|
Sbjct 73 CCCGGTTCGAAAGATGCCGGCAC---------TAGTGAGTGGCTGCGGCGGGCCCGCCCTCCCGGCTTCTCCGC 137
Query 79 ----------------GCGGACAAGTTAGGTGAG------------GTAGAAGATAGCACCATGCCGATTCGTC 124
||.|.|| |||.| ||| |.||||||||.|||||||||.||.||||
Sbjct 138 CCCCGCCGCCGCCGTGGCCGCCA--TTACG-GAGTCCCCAGTGAAAGCAGAAGATACCACCATGCCTATACGTC 208
Query 125 GAACTGTGAATTCTACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCA 198
||.|.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct 209 GAGCCGTGAATTCTACCCGGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACC------- 275
Query 199 GACATAAGTTCAGAGGAATCTGTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGA 272
|||||||||.||||||||.||||||||||||||.||.|||||
Sbjct 276 --------------------------------AGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGA 317
Query 273 GGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCA 340
||||||||||||.||||||||.|||||||.||.||||||||||| |.||.||||||.||||||||.|||
Sbjct 318 GGCAGAGCAGCCCAAGGGGGAGCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCA 391
Query 341 AAAAGGATGAGAAAGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTT 414
|||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||.|||||||.||.||.
Sbjct 392 AAAAGGATGAGAAGGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTC 465
Query 415 TCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAAT 488
||||||||||||||||||||||||||||.||||||.||.||||||||.||||||||.|||||||||||.|||||
Sbjct 466 TCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAAT 539
Query 489 CTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCC 562
|||||||||||||||||||||||||||||||||||.|||.||.||.||||||||.||||||||.||||||||.|
Sbjct 540 CTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTC 613
Query 563 ATAAGTATCCTTCTCTGGAGCTGGAGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGA 636
|||||||.||.|||||||..||||||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||
Sbjct 614 ATAAGTACCCGTCTCTGGGTCTGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGA 687
Query 637 GGAGTCATCAAACAGGTTAAAGGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACC 710
||||||||||.||||||.||||||||||||||.|||||.||||||||||||||.|||||||| ||||.||||
Sbjct 688 GGAGTCATCAGACAGGTAAAAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACC 758
Query 711 TCAGAAATCCAGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCC 784
|||||||||||.|||||||||||| |.||||.||..|||||||||||||||||||||||.||||.|||||.|
Sbjct 759 TCAGAAATCCAAAAACAGAAAGAA---GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTC 829
Query 785 TCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAG 858
||||..||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 830 TCCCGTTGGCTTTTACTCGGCTCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAG 903
Query 859 TATTATCCTAAGCTTAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGG 932
|||||.||||||||.|||||||||||||||||.|||.||||||||||.|||||||||.|||||||||||||.||
Sbjct 904 TATTACCCTAAGCTCAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGG 977
Query 933 CCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC----- 993
||||.|.||.||||||||||||||.|||||||||||||||||.| |||||| ||||....|||
Sbjct 978 CCAGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGC 1051
Query 994 ---GTG---------------------------------TTGC--CCAGG------------------------ 1005
||| |||| |||.|
Sbjct 1052 TGGGTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACC 1125
Query 1006 -CTACTCTTGAA-------CTCCTGGGTTCAG------------------------------------------ 1029
||.||| |||| .|||||| ||
Sbjct 1126 ACTGCTC-TGAAGAAGTATGTCCTGG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTG 1194
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1195 AAAAAAACCCTGCAGAAATGTGAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTT 1268
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1269 CCAGCTGTCCTTCCCCTACTACCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATG 1342
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1343 AAGATGAAGATGACGATGACGATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTA 1416
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1417 CAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAA 1490
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1491 AGTCCCGGCTGCCCAGAGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCA 1564
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1565 GGAAAGCCAGACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCA 1638
Query 1030 ------------------------------------------------------------------ 1029
Sbjct 1639 CGAAAGGAAGCGAAACTGCCCGGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG 1704
