Nucleotide Global Alignment
Description
- Query:
- TRCN0000475906
- Subject:
- XM_030253217.1
- Aligned Length:
- 1768
- Identities:
- 851
- Gaps:
- 806
Alignment
Query 1 --------------ATGG--CGACTGATACGTCTC-------------------AAGGTGAACTCGTC--CA-- 35
.||| ||||| |.||.|.| |..||.||||.||| ||
Sbjct 1 ATGCTCCGAGGCCTGTGGCCCGACT--TCCGCCGCGCCCTCCTCCCCTCGGCCTACTGTCAACTTGTCTTCAAG 72
Query 36 -----TCCTAA-------GGCACTCCCACTTATAGT-AGGAGCT------------------CAGCTGATCCAC 78
|.|.|| ||||| |||| ||..||| |.|||..|||.|
Sbjct 73 CCCGGTTCGAAAGATGCCGGCAC---------TAGTGAGTGGCTGCGGCGGGCCCGCCCTCCCGGCTTCTCCGC 137
Query 79 ----------------GCGGACAAGTTAGGTGAG------------GTAGAAGATAGCACCATGCCGATTCGTC 124
||.|.|| |||.| ||| |.||||||||.|||||||||.||.||||
Sbjct 138 CCCCGCCGCCGCCGTGGCCGCCA--TTACG-GAGTCCCCAGTGAAAGCAGAAGATACCACCATGCCTATACGTC 208
Query 125 GAACTGTGAATTCTACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCA 198
||.|.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct 209 GAGCCGTGAATTCTACCCGGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACC------- 275
Query 199 GACATAAGTTCAGAGGAATCTGTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGA 272
|||||||||.||||||||.||||||||||||||.||.|||||
Sbjct 276 --------------------------------AGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGA 317
Query 273 GGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCA 340
||||||||||||.||||||||.|||||||.||.||||||||||| |.||.||||||.||||||||.|||
Sbjct 318 GGCAGAGCAGCCCAAGGGGGAGCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCA 391
Query 341 AAAAGGATGAGAAAGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTT 414
|||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||.|||||||.||.||.
Sbjct 392 AAAAGGATGAGAAGGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTC 465
Query 415 TCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAAT 488
||||||||||||||||||||||||||||.||||||.||.||||||||.||||||||.|||||||||||.|||||
Sbjct 466 TCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAAT 539
Query 489 CTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCC 562
|||||||||||||||||||||||||||||||||||.|||.||.||.||||||||.||||||||.||||||||.|
Sbjct 540 CTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTC 613
Query 563 ATAAGTATCCTTCTCTGGAGCTGGAGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGA 636
|||||||.||.|||||||..||||||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||
Sbjct 614 ATAAGTACCCGTCTCTGGGTCTGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGA 687
Query 637 GGAGTCATCAAACAGGTTAAAGGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACC 710
||||||||||.||||||.||||||||||||||.|||||.||||||||||||||.|||||||| ||||.||||
Sbjct 688 GGAGTCATCAGACAGGTAAAAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACC 758
Query 711 TCAGAAATCCAGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCC 784
|||||||||||.||||||||| |.||||.||..|||||||||||||||||||||||.||||.|||||.|
Sbjct 759 TCAGAAATCCAAAAACAGAAA------GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTC 826
Query 785 TCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAG 858
||||..||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 827 TCCCGTTGGCTTTTACTCGGCTCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAG 900
Query 859 TATTATCCTAAGCTTAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGG 932
|||||.||||||||.|||||||||||||||||.|||.||||||||||.|||||||||.|||||||||||||.||
Sbjct 901 TATTACCCTAAGCTCAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGG 974
Query 933 CCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC----- 993
||||.|.||.||||||||||||||.|||||||||||||||||.| |||||| ||||....|||
Sbjct 975 CCAGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGC 1048
Query 994 ---GTG---------------------------------TTGC--CCAGG------------------------ 1005
||| |||| |||.|
Sbjct 1049 TGGGTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACC 1122
Query 1006 -CTACTCTTGAA-------CTCCTGGGTTCAG------------------------------------------ 1029
||.||| |||| .|||||| ||
Sbjct 1123 ACTGCTC-TGAAGAAGTATGTCCTGG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTG 1191
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1192 AAAAAAACCCTGCAGAAATGTGAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTT 1265
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1266 CCAGCTGTCCTTCCCCTACTACCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATG 1339
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1340 AAGATGAAGATGACGATGACGATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTA 1413
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1414 CAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAA 1487
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1488 AGTCCCGGCTGCCCAGAGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCA 1561
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1562 GGAAAGCCAGACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCA 1635
Query 1030 ------------------------------------------------------------------ 1029
Sbjct 1636 CGAAAGGAAGCGAAACTGCCCGGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG 1701