Nucleotide Global Alignment
Description
- Query:
- TRCN0000475906
- Subject:
- XM_030253218.1
- Aligned Length:
- 1673
- Identities:
- 883
- Gaps:
- 694
Alignment
Query 1 ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT 74
|||||.|||||||.||||||||||||||||.||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1 ATGGCAACTGATATGTCTCAAGGTGAACTCATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGAT 74
Query 75 CCACGCGGACAAGTTAGGTGAG---GTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGG 145
|||||||||||||||||||||| |.||||||||.|||||||||.||.||||||.|.||||||||||||||||
Sbjct 75 CCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCACCATGCCTATACGTCGAGCCGTGAATTCTACCCGGG 148
Query 146 AAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCT 219
|||||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct 149 AAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACC---------------------------- 194
Query 220 GTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGA 293
|||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||
Sbjct 195 -----------AGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGA 257
Query 294 ACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGT 361
.|||||||.||.||||||||||| |.||.||||||.||||||||.||||||||||||||||.|||||||
Sbjct 258 GCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGATCAGT 331
Query 362 CTAAAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGG 435
||||||||||||||||||||||||||||.||.||||||.|||||||.||.||.|||||||||||||||||||||
Sbjct 332 CTAAAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGG 405
Query 436 GCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGC 509
|||||||.||||||.||.||||||||.||||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct 406 GCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGC 479
Query 510 ATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGC 583
||||||||||||||.|||.||.||.||||||||.||||||||.||||||||.||||||||.||.|||||||..|
Sbjct 480 ATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTC 553
Query 584 TGGAGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAA 657
|||||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||||||||||||.||||||.|||
Sbjct 554 TGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGAGGAGTCATCAGACAGGTAAAA 627
Query 658 GGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAA 731
|||||||||||.|||||.||||||||||||||.|||||||| ||||.|||||||||||||||.|||||||||
Sbjct 628 GGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACCTCAGAAATCCAAAAACAGAAA 698
Query 732 GAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCC 805
||| |.||||.||..|||||||||||||||||||||||.||||.|||||.|||||..||||.||||||||.|
Sbjct 699 GAA---GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGTTGGCTTTTACTCGGC 769
Query 806 TTTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTG 879
|.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.||||||
Sbjct 770 TCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTATTACCCTAAGCTCAGAGTG 843
Query 880 GACATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGG 953
|||||||||||.|||.||||||||||.|||||||||.|||||||||||||.||||||.|.||.|||||||||||
Sbjct 844 GACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGG 917
Query 954 CAAAGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC--------GTG--------------- 996
|||.|||||||||||||||||.| |||||| ||||....||| |||
Sbjct 918 CAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGGGTGGAAGCCTGATGGAAT 991
Query 997 ------------------TTGC--CCAGG-------------------------CTACTCTTGAA-------CT 1018
|||| |||.| ||.||| |||| .|
Sbjct 992 ATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACTGCTC-TGAAGAAGTATGT 1064
Query 1019 CCTGGGTTCAG--------------------------------------------------------------- 1029
||||| ||
Sbjct 1065 CCTGG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAACCCTGCAGAAATGT 1134
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1135 GAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGTCCTTCCCCTACTA 1208
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1209 CCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAAGATGACGATGACG 1282
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1283 ATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAG 1356
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1357 TCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGG 1430
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1431 GAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCTCTCCCT 1504
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1505 CAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAGCGAAACTGCCC 1578
Query 1030 --------------------------------------------- 1029
Sbjct 1579 GGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG 1623