Nucleotide Global Alignment
Description
- Query:
- TRCN0000475906
- Subject:
- XM_030253219.1
- Aligned Length:
- 1673
- Identities:
- 880
- Gaps:
- 697
Alignment
Query 1 ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT 74
|||||.|||||||.||||||||||||||||.||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1 ATGGCAACTGATATGTCTCAAGGTGAACTCATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGAT 74
Query 75 CCACGCGGACAAGTTAGGTGAG---GTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGG 145
|||||||||||||||||||||| |.||||||||.|||||||||.||.||||||.|.||||||||||||||||
Sbjct 75 CCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCACCATGCCTATACGTCGAGCCGTGAATTCTACCCGGG 148
Query 146 AAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCT 219
|||||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct 149 AAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACC---------------------------- 194
Query 220 GTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGA 293
|||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||
Sbjct 195 -----------AGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGA 257
Query 294 ACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGT 361
.|||||||.||.||||||||||| |.||.||||||.||||||||.||||||||||||||||.|||||||
Sbjct 258 GCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGATCAGT 331
Query 362 CTAAAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGG 435
||||||||||||||||||||||||||||.||.||||||.|||||||.||.||.|||||||||||||||||||||
Sbjct 332 CTAAAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGG 405
Query 436 GCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGC 509
|||||||.||||||.||.||||||||.||||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct 406 GCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGC 479
Query 510 ATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGC 583
||||||||||||||.|||.||.||.||||||||.||||||||.||||||||.||||||||.||.|||||||..|
Sbjct 480 ATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTC 553
Query 584 TGGAGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAA 657
|||||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||||||||||||.||||||.|||
Sbjct 554 TGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGAGGAGTCATCAGACAGGTAAAA 627
Query 658 GGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAA 731
|||||||||||.|||||.||||||||||||||.|||||||| ||||.|||||||||||||||.|||||||||
Sbjct 628 GGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACCTCAGAAATCCAAAAACAGAAA 698
Query 732 GAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCC 805
|.||||.||..|||||||||||||||||||||||.||||.|||||.|||||..||||.||||||||.|
Sbjct 699 ------GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGTTGGCTTTTACTCGGC 766
Query 806 TTTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTG 879
|.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.||||||
Sbjct 767 TCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTATTACCCTAAGCTCAGAGTG 840
Query 880 GACATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGG 953
|||||||||||.|||.||||||||||.|||||||||.|||||||||||||.||||||.|.||.|||||||||||
Sbjct 841 GACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGG 914
Query 954 CAAAGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC--------GTG--------------- 996
|||.|||||||||||||||||.| |||||| ||||....||| |||
Sbjct 915 CAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGGGTGGAAGCCTGATGGAAT 988
Query 997 ------------------TTGC--CCAGG-------------------------CTACTCTTGAA-------CT 1018
|||| |||.| ||.||| |||| .|
Sbjct 989 ATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACTGCTC-TGAAGAAGTATGT 1061
Query 1019 CCTGGGTTCAG--------------------------------------------------------------- 1029
||||| ||
Sbjct 1062 CCTGG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAACCCTGCAGAAATGT 1131
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1132 GAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGTCCTTCCCCTACTA 1205
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1206 CCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAAGATGACGATGACG 1279
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1280 ATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAG 1353
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1354 TCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGG 1427
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1428 GAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCTCTCCCT 1501
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1502 CAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAGCGAAACTGCCC 1575
Query 1030 --------------------------------------------- 1029
Sbjct 1576 GGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG 1620
