Nucleotide Global Alignment

Description

Query:
TRCN0000475906
Subject:
XM_030253222.1
Aligned Length:
1670
Identities:
812
Gaps:
763

Alignment

Query    1  ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCACGCGGACAAGTTAGGTGAGGTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGGAAA  148
                                                 |||||.||.||||||.|.|||||||||||||||||||
Sbjct    1  -------------------------------------ATGCCTATACGTCGAGCCGTGAATTCTACCCGGGAAA  37

Query  149  CTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCTGTC  222
            ||||.|||||||||||.|||||||||||||||||||||||.|||||||||||...||||||||||||||||.||
Sbjct   38  CTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACCAGAACCAGATGGAAGTTCAGAGGAATCTATC  111

Query  223  TCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACC  296
            ||.||||||||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||.||
Sbjct  112  TCTACTGTAGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCC  185

Query  297  TGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGTCTA  364
            |||||.||.|||||||||||      |.||.||||||.||||||||.||||||||||||||||.||||||||||
Sbjct  186  TGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGATCAGTCTA  259

Query  365  AAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGGGCC  438
            |||||||||||||||||||||||||.||.||||||.|||||||.||.||.||||||||||||||||||||||||
Sbjct  260  AAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCC  333

Query  439  CAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGCATG  512
            ||||.||||||.||.||||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct  334  CAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGCATG  407

Query  513  CTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGCTGG  586
            |||||||||||.|||.||.||.||||||||.||||||||.||||||||.||||||||.||.|||||||..||||
Sbjct  408  CTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTCTGG  481

Query  587  AGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAAGGA  660
            ||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||||||||||||.||||||.||||||
Sbjct  482  AGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGAGGAGTCATCAGACAGGTAAAAGGA  555

Query  661  AAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAAGAA  734
            ||||||||.|||||.||||||||||||||.||||||||   ||||.|||||||||||||||.||||||||||||
Sbjct  556  AAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACCTCAGAAATCCAAAAACAGAAAGAA  626

Query  735  TAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTT  808
               |.||||.||..|||||||||||||||||||||||.||||.|||||.|||||..||||.||||||||.||.|
Sbjct  627  ---GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGTTGGCTTTTACTCGGCTCT  697

Query  809  GTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTGGAC  882
            ||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.|||||||||
Sbjct  698  GTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTATTACCCTAAGCTCAGAGTGGAC  771

Query  883  ATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGGCAA  956
            ||||||||.|||.||||||||||.|||||||||.|||||||||||||.||||||.|.||.||||||||||||||
Sbjct  772  ATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGGCAA  845

Query  957  AGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC--------GTG------------------  996
            .|||||||||||||||||.|      ||||||  ||||....|||        |||                  
Sbjct  846  GGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGGGTGGAAGCCTGATGGAATATG  919

Query  997  ---------------TTGC--CCAGG-------------------------CTACTCTTGAA-------CTCCT  1021
                           ||||  |||.|                         ||.||| ||||       .||||
Sbjct  920  CAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACTGCTC-TGAAGAAGTATGTCCT  992

Query 1022  GGGTTCAG------------------------------------------------------------------  1029
            ||    ||                                                                  
Sbjct  993  GG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAACCCTGCAGAAATGTGAG  1062

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1063  AAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGTCCTTCCCCTACTACCC  1136

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1137  TAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAAGATGACGATGACGATG  1210

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1211  AATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAGTCC  1284

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1285  CAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGGGAA  1358

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1359  AGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCTCTCCCTCAG  1432

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1433  TCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAGCGAAACTGCCCGGG  1506

Query 1030  ------------------------------------------  1029
                                                      
Sbjct 1507  AAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG  1548

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