Nucleotide Global Alignment
Description
- Query:
- TRCN0000475906
- Subject:
- XR_001784094.2
- Aligned Length:
- 3477
- Identities:
- 888
- Gaps:
- 2473
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGAGGGGCAGCTCTTCTCGGGTCGGGCCCACCCCCCCTCCGTGCTTGTCTCAGTGCGCATGCTCCGGCG 74
Query 1 -------------------------------------------------ATGG--CGACTGATACGTCTC---- 19
.||| ||||| |.||.|.|
Sbjct 75 TGCGCCGCGGAGCCCTATTGGCTGCGGGCTTGCGCATGCTCCGAGGCCTGTGGCCCGACT--TCCGCCGCGCCC 146
Query 20 ---------------AAGGTGAACTCGTC--CA-------TCCTAA-------GGCACTCCCACTTATAGT-AG 61
|..||.||||.||| || |.|.|| ||||| |||| ||
Sbjct 147 TCCTCCCCTCGGCCTACTGTCAACTTGTCTTCAAGCCCGGTTCGAAAGATGCCGGCAC---------TAGTGAG 211
Query 62 GAGCT------------------CAGCTGATCCAC----------------GCGGACAAGTTAGGTGAG----- 96
..||| |.|||..|||.| ||.|.|| |||.| |||
Sbjct 212 TGGCTGCGGCGGGCCCGCCCTCCCGGCTTCTCCGCCCCCGCCGCCGCCGTGGCCGCCA--TTACG-GAGTCCCC 282
Query 97 -------GTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGGAAACTCCTCCCAAAAGCA 163
|.||||||||.|||||||||.||.||||||.|.|||||||||||||||||||||||.||||||||||
Sbjct 283 AGTGAAAGCAGAAGATACCACCATGCCTATACGTCGAGCCGTGAATTCTACCCGGGAAACTCCACCCAAAAGCA 356
Query 164 AGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCTGTCTCCACTGTAGAAGAA 237
|.|||||||||||||||||||||||.|||||||||||...||||||||||||||||.||||.||||||||||||
Sbjct 357 AACTTGCTGAAGGGGAGGAAGAAAAACCAGAACCAGATGGAAGTTCAGAGGAATCTATCTCTACTGTAGAAGAA 430
Query 238 CAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAA 311
||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||.|||||||.||.||||||
Sbjct 431 CAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCCTGAGAGTGGAGAGAA 504
Query 312 GGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGTCTAAAGAAAAGGAGAAGA 379
||||| |.||.||||||.||||||||.||||||||||||||||.|||||||||||||||||||||||||
Sbjct 505 GGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGATCAGTCTAAAGAAAAGGAGAAGA 578
Query 380 AAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAACACCG 453
||||||||||.||.||||||.|||||||.||.||.||||||||||||||||||||||||||||.||||||.||.
Sbjct 579 AAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCC 652
Query 454 ATGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGAGTGG 527
||||||||.||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 653 ATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGACTGG 726
Query 528 TGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGCTGGAGAGAAGGGGTTATC 601
.||.||.||||||||.||||||||.||||||||.||||||||.||.|||||||..||||||||||||||.||||
Sbjct 727 CGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTCTGGAGAGAAGGGGCTATC 800
Query 602 TCCTTAAACAAGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAAGGAAAAGGTGCTTCTGGA 675
|.||.||.|||||.|||||.|||||.|||||.|||||||||||||.||||||.||||||||||||||.|||||.
Sbjct 801 TGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGAGGAGTCATCAGACAGGTAAAAGGAAAAGGTGCATCTGGC 874
Query 676 AGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAAGAATAGGAGCTCTGCAGT 749
||||||||||||||.|||||||| ||||.|||||||||||||||.|||||||||||| |.||||.||..|
Sbjct 875 AGTTTTGTTGTGGTCCAGAAATC---AAAACCACCTCAGAAATCCAAAAACAGAAAGAA---GGGCTCGGCTCT 942
Query 750 GGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAG 823
||||||||||||||||||||||.||||.|||||.|||||..||||.||||||||.||.||||||||||||||||
Sbjct 943 GGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGTTGGCTTTTACTCGGCTCTGTGAACCTAAAGAAG 1016
Query 824 CTTCCTACAGTCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTGGACATCAGGCCTCAGCTG 897
|||||||||||||||||||||||||.||||||||||||||.||||||||.|||||||||||||||||.|||.||
Sbjct 1017 CTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTATTACCCTAAGCTCAGAGTGGACATCAGGCCCCAGTTG 1090
Query 898 TTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGAC 971
||||||||.|||||||||.|||||||||||||.||||||.|.||.||||||||||||||.||||||||||||||
Sbjct 1091 TTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGAC 1164
Query 972 ATTCC------AGAAAT--GGGGTTTCGCC--------GTG--------------------------------- 996
|||.| |||||| ||||....||| |||
Sbjct 1165 ATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGGGTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCA 1238
Query 997 TTGC--CCAGG-------------------------CTACTCTTGAA-------CTCCTGGGTTCAG------- 1029
|||| |||.| ||.||| |||| .|||||| ||
Sbjct 1239 TTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACTGCTC-TGAAGAAGTATGTCCTGG----AGAACCACC 1307
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1308 CAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAACCCTGCAGAAATGTGAGAAGAACGGGTGGCTG 1381
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1382 GAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGTCCTTCCCCTACTACCCTAGCCCAGGAGTTCT 1455
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1456 ATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAAGATGACGATGACGATGAATCATCAGAAGACT 1529
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1530 CTGAGGATGAGGAACCACCACCCAAGAGGAGGTGTGATCTGAGGAAGCTACTGAGACGGATGATAAATCTCTCA 1603
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1604 GAGCTGAAAATGGAGTTGGGCTTGTAATTCCAGATATTAAGGAGGAGACTGAAGCAGAGCTGGAAGTTGATGGC 1677
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1678 CAGTGGGGGCAGCTTATTGAAACACCATCTCAAAAAGTAAAACAAGGCCTGGGGACATAGCTTACAGAAGAAAA 1751
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1752 CACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCT 1825
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1826 GCCCAGAGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAG 1899
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1900 ACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAG 1973
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1974 CGAAACTGCCCGGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAGTAAATTTTATAGGGAAAA 2047
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2048 GGGTATCATGATTGAATTCAGAATCTTACTTTATAAGGTCAGTGTGCATTTGTTCTAGTTATAATGCTTTTAAA 2121
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2122 TTGTACTTTTTCTTCCCATGTGAGCATTGTGGGAAGGAATGGACACAGAGCAGCGTAGACATTTGTGAGCTTCG 2195
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2196 GTGCTGTTCAGTGCCTGCTTCTTCATCACCTTAATTTCTGCCATAACCTGGACTTCGCTGACTGTGTGACTGCC 2269
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2270 CTGCTCCCTCTGTTCATCTTAGCCCCAGCCCTCGTCCTCTTTCTGTGATCCGATTGAGGATTTTTTCCTCCTTC 2343
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2344 AAGTTAATTTAAACAACTGCAGAGATGTGTTTGTAGAGCACTTAGAGGTCTGGGGCTGGAAGTCCAGACGGCGC 2417
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2418 AGGAGCAGTGTTGGGAAGGCTTTGCGTCCTGCCTGCAGACTTGCTAGAGCTGTGGTGATTAACCCTGGCTGTTG 2491
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2492 AATCACTCCACTGACCAGTCTCCAGCTTGAGTCGGGGACATGTTAACTTCGGAAAGAAGCCCCCGTCCCTGCCA 2565
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2566 TCCCATAGATTCTGAAGGGCTCCTCTCCTCCGGTCACGCTGACCAACTGCCAAGCTCGCTTTGCTGCCCAGAGC 2639
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2640 ACTGTCCCCTCACAGCAAGCACAAGTTGTCTGCACCACTTGGTTTCTGACTGAAGGGGAAGTACAGGACTACAT 2713
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2714 GGAATCTGATTTCTGGTGTTGCTTATTACCAAAAATGACAGAATATTCTTGATCAAATGTCTAGATATATTTTT 2787
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2788 AATATTTGGGGCATGAGTTGTCCCTGTTTGAGAGTTCCCATTACTAATGTAGAAATGTTAAATGGTAAAACATA 2861
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2862 ATTTGCTAAAATGACCAGTTTTCAGATTCACCTGTGCGTGTGCCCCCCACTCCCATCCCACCCTGTTCTTTCCA 2935
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2936 TAGAACTTTTGATATCAGGCAAACGGTTTCCTTTTTGAGATATTTTAACAGAGAAGGGGTGGGGGAGAAGCAGA 3009
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 3010 TGAAGCTGTACTACCCAGCCCTCTTCTTGTTTGTATTTGTTTAGGGTTGTGAGGTTGTGTAAAATAGTACTAGC 3083
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 3084 TTCTTACTTGAGAACTACAGTTTCTGCTTATCATTTATTCTTCCTTGTGGCACTTAATATTTTAATTGTCTTAA 3157
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 3158 GCTTTTTGATGTATATATCCTCTGGCCCCTTACATGCTGCCAGAGGAGAAGGTGTTTGTTTGAGATTCATTCCA 3231
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 3232 CTTGAAGTGTCTCCTGGGATCCCCACAGCTGCGTATGGCTGGGAAATGGACTTAAGGCTTGGGCTTGAATTGGT 3305
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 3306 GGCTCCTACCTGTGAGGTCCCATCGTGAGTCACTGGGATTTGTGTTGCATGGAAGGCAGTCTTTCCTGTTGTAA 3379
Query 1030 ------------------------------------------------------------------------- 1029
Sbjct 3380 ATCTTCCTTTTTTATGTACAAATATTTTGAAAAATATGAATAAACATGAACTTTTAAAAGCTGCTGAACTACA 3452
