Nucleotide Global Alignment

Description

Query:
TRCN0000475928
Subject:
XM_006499734.3
Aligned Length:
1531
Identities:
1306
Gaps:
8

Alignment

Query    1  ATGTCTGAAAACCTTGACAAGTCCAATGTAAATGAAGCAGGAAAATCAAAATCCAATGATTCTGAGGAAGGCCT  74
            ||||||||||||||||||||||||.|||||.|.|||||||||.|..||.|..|...||..||.|||.|||||||
Sbjct    1  ATGTCTGAAAACCTTGACAAGTCCCATGTAGACGAAGCAGGAGAGGCAGAGGCGGCTGCCTCCGAGCAAGGCCT  74

Query   75  CGAAGATGCTGTGGAAGGTG--CTGATGAAGCCTTACAAAAAGCAATAAAGTCAGACTCCTCCAGCCCCCAAAG  146
            .||||.||||.||||  |||  ||||||||.|||||||.|||..|.|.|||||.|||||..|.||..|||||||
Sbjct   75  GGAAGGTGCTCTGGA--GTGCTCTGATGAAACCTTACAGAAAAAAGTGAAGTCGGACTCACCTAGTTCCCAAAG  146

Query  147  AGTGCAGAGACCTCACTCTAGTCCTCCTCGCTTTGTGACAGTAGAAGAACTTCTAGAGACAGCGAGAGGCGTCA  220
            ||||...|||||||||||.|||||..||||..||||.||.|||||.|||||||||||.|||||.|.|||.||||
Sbjct  147  AGTGGGAAGACCTCACTCCAGTCCCGCTCGGCTTGTCACTGTAGAGGAACTTCTAGAAACAGCAAAAGGAGTCA  220

Query  221  CCAACATGGCTCTAGCCCATGAAATTGTAGTAAATGGAGACTTTCAGATTAAACCAGTTGAATTACCAGAAAAC  294
            |||||||||||||.|||||||||||||||||||.|||||||||.|.||||||..|.|||||||||.|.|||..|
Sbjct  221  CCAACATGGCTCTGGCCCATGAAATTGTAGTAACTGGAGACTTCCGGATTAACGCTGTTGAATTAGCCGAAGGC  294

Query  295  AGCTTGAAGAAGAGAGTAAAGGAGATTGTACATAAAGCGTTTTGGGATTGCTTGAGTGTGCAGCTAAGTGAAGA  368
            ||||||.|||||||||||||.|||||||||||||||||.||.|||||||||||||||||.|||.||||||||||
Sbjct  295  AGCTTGGAGAAGAGAGTAAAAGAGATTGTACATAAAGCATTCTGGGATTGCTTGAGTGTCCAGTTAAGTGAAGA  368

Query  369  TCCCCCAGCATATGACCATGCTATCAAACTTGTAGGAGAAATCAAAGAGACTCTCTTATCTTTCTTGCTGCCTG  442
            .||||||.|||||||||||||.|||||||||||||||||.||||||||||||||.|||||||||||||||||||
Sbjct  369  GCCCCCAACATATGACCATGCCATCAAACTTGTAGGAGAGATCAAAGAGACTCTGTTATCTTTCTTGCTGCCTG  442

Query  443  GTCATACTAGACTGAGAAACCAGATAACAGAAGTCTTGGATCTGGATCTGATAAAGCAGGAAGCAGAGAATGGG  516
            ||||.||||||||.||||||||||||||.|||||||||||||||||.||||||||.||.|||||||||||||||
Sbjct  443  GTCACACTAGACTAAGAAACCAGATAACGGAAGTCTTGGATCTGGAGCTGATAAAACAAGAAGCAGAGAATGGG  516

Query  517  GCGCTAGACATTTCCAGGCTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCACCTGCTCGAGATGA  590
            ||.|||||||||||||.|||||||||.||||||||||||||||||||||.|.||||||||||||||||||||||
Sbjct  517  GCCCTAGACATTTCCAAGCTGGCAGAGTTCATTATTGGCATGATGGGGATATTGTGTGCACCTGCTCGAGATGA  590

Query  591  GGAAGTTAAGAAACTAAAGGACATTAAGGAAATAGTGCCCCTTTTCAGAGAAATTTTTTCTGTGTTGGACCTAA  664
            |||||||||.||||||||||.||||||||||||||||||.||.|||||.|.|||.|||||||||||||||||||
Sbjct  591  GGAAGTTAAAAAACTAAAGGGCATTAAGGAAATAGTGCCTCTCTTCAGGGCAATATTTTCTGTGTTGGACCTAA  664

Query  665  TGAAAGTGGACATGGCCAACTTTGCTATCAGTAGCATCAGGCCTCATCTCATGCAGCAGTCAGTTGAATACGAA  738
            |||||||.||||||||||||||.||.|||||||||||.|||||.||.|||||||||||||||||.||.||.||.
Sbjct  665  TGAAAGTTGACATGGCCAACTTCGCCATCAGTAGCATTAGGCCGCACCTCATGCAGCAGTCAGTCGAGTATGAG  738

Query  739  AGGAAGAAGTTTCAAGAGATTTTGGAGAGGCAACCAAATTCCCTGGACTTTGTCACCCAGTGGCTGGAAGAAGC  812
            ||||.|||||||||.||..|..||||||||||.||.||.|||||||||||||.|||.||||||||||||||.||
Sbjct  739  AGGAGGAAGTTTCAGGAAGTGCTGGAGAGGCAGCCGAACTCCCTGGACTTTGCCACACAGTGGCTGGAAGAGGC  812

Query  813  CTCAGAGGACCTTATGACTCAGAAGTATAAACACGCCCTGCCAGTGGGGGGAATGGCTGCTGGCTCTGGGGACA  886
            |.||.|.||||||.|||.|||||||||.|||||.||||||||||..||||||...||||||||||||||||  |
Sbjct  813  CACAAATGACCTTTTGAGTCAGAAGTACAAACATGCCCTGCCAGCTGGGGGAGGCGCTGCTGGCTCTGGGG--A  884

Query  887  TGCCC--AGGCTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGGGACCACCTCCAGA  958
            |||||  ...||||.|||||||.||||||||||||.|||.|||||||||||||||||.|||||||||.||||||
Sbjct  885  TGCCCCACTCCTGACCCCTGTTTCTGTCCAGAATTTCGCCTACCTGAAGCTTCTGAAATGGGACCACTTCCAGA  958

Query  959  GGCCGTTCCCCGAAACAGTTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGACC  1032
            |.||.|||||.||.||||||||.||||||||||||||.|||||.|||||||||.|.||||||||.||.|||.||
Sbjct  959  GACCTTTCCCTGAGACAGTTTTGATGGACCAGTCTCGTTTCCAAGAGCTCCAGCTCCAGCTGGAGCAGCTGGCC  1032

Query 1033  ATCCTGGGGGCTGTGTTGCTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGA  1106
            .|||||||.||.|||.||||||||||.|||||.|..||.||.||.||||||||..|.||.|||||||||||.||
Sbjct 1033  GTCCTGGGAGCCGTGCTGCTGGTCACGTTCAGTACCGCTGCACCGGGAATTTCTGGGCATGCCGACTTTGCCGA  1106

Query 1107  GAAACTCAAGATGATTGTGAAGATTTTGCTAACAGATATGCACCTGCCCTCCTTCCATCTGAAGGACGTCCTCA  1180
            |||.|||||||||||.|||||||.|.|||||||.||.|||||.|||||.||||||||||||.||||||.|||..
Sbjct 1107  GAAGCTCAAGATGATGGTGAAGACTCTGCTAACGGACATGCATCTGCCTTCCTTCCATCTGGAGGACGCCCTGG  1180

Query 1181  CTACCATCGGGGAGAAGGTGTGCCTGGAGGTGAGCAGCTGCCTCTCCCTGTGTGGGTCCTCTCCCTTCACCACG  1254
            ||.||||.||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||.|||.||...
Sbjct 1181  CTTCCATTGGCGAGAAGGTGTGCCTGGAGGTGAGCAGCTGCCTCTCCCTGTGTGGCTCCTCCCCATTCTCCGTT  1254

Query 1255  GACAAGGAGACCGTGCTCAAGGGCCAGATCCAGGCCGTGGCCAGTCCCGATGACCCCATTCGCAGGATCATGGA  1328
            |..||||||||||||||||||||||||||.||||||.|.|||||||||||.|||||||||||||||||||||||
Sbjct 1255  GCTAAGGAGACCGTGCTCAAGGGCCAGATTCAGGCCCTCGCCAGTCCCGAGGACCCCATTCGCAGGATCATGGA  1328

Query 1329  ATCTCGAATCCTGACCTTCTTAGAAACCTACCTTGCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCTGGGG  1402
            .||.||.||..|.||||||||.||.||.|||||||||||.||||||||||||||..||||.||.||.|||||||
Sbjct 1329  GTCCCGCATTTTCACCTTCTTGGAGACATACCTTGCCTCTGGTCATCAGAAGCCCCTGCCTACTGTGCCTGGGG  1402

Query 1403  GACTCAGTCCAGTTCAGAGAGAGCTGGAGGAAGTTGCTATTAAATTTGCTCGCCTGGTCAACTATAACAAGATG  1476
            ||.|..||||..||||||.|||||||||.|||||||||.|.|||||||..||||||||||||||||||||||||
Sbjct 1403  GATTGGGTCCCATTCAGAAAGAGCTGGAAGAAGTTGCTGTGAAATTTGTGCGCCTGGTCAACTATAACAAGATG  1476

Query 1477  GTCTTCTGTCCATACTACGATGCAATCCTGAGTAAGATCCTCGTCCGATCC  1527
            ||.||||||||.|||||||||||||||||.||||||.|||||.||||.|||
Sbjct 1477  GTGTTCTGTCCCTACTACGATGCAATCCTTAGTAAGCTCCTCCTCCGCTCC  1527

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