Nucleotide Global Alignment
Description
- Query:
- TRCN0000475944
- Subject:
- XR_001743234.2
- Aligned Length:
- 2450
- Identities:
- 450
- Gaps:
- 1934
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTATCCAGCCTCCCTCGGCCAAATTGCTGCGGAGCCCGTCGTCAGGGGGCGCCAAGGAGCCAGGGGGAAAACCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGGCGCTGACAGGAGCCTCCCGGCGGTGCTACCCTCCACCTCCCACCTCCCTGCGCCCCGCCCCGAGGTTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTTTGAAGAATGCAGCCGGGGAAAGCATTAACTTTTGAGCTACGTCCAGAATAGCATCATCTTCATGGGTAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCTACTCCTAGGATTTCAGAAAACCTTTGATAACTAATTGAGAAAATGCAGAAGATCGTGCAGACAGATGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTACCAATACACAAGCTTTTAGAAAAGGAAAGAGGAAAAGAACAGAGACAATGGACTCAGAAAATGCAAATAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGACATGGATAAAGGACAGAGAGACCCATATTCGGGAAATGCCTTTCTGCCTGGTGAAAGCTCCAGTGAGGATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGAGCCTTTAGCAGAATTGTCAAAGGAAGAATTGTGCGCCAAAATAAAAAGCCTGAAAGAAAAACTAACAAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCCGGAAAGAAAACAGCCGACTTCGACAGTCTTTGGTCATGCTTCAAGGAAACAAACTAGATATAACAACAGA 592
Query 1 -----------------------------------ATGTTGTTACCACAAGCAGTCACCCAGTTTGAAGAATTG 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAAGACCATTTTACATGGAGGCATGAAAACTTTGAATGTTGTTACCACAAGCAGTCACCCAGTTTGAAGAATTG 666
Query 40 GTTGGTATGGCCGAGGCTCTGCTTAAGGGTGGGGGAACCATGTCTACATCTGCATCCACCCTCTGGAGAGCAAC 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTTGGTATGGCCGAGGCTCTGCTTAAGGGTGGGGGAACCATGTCTACATCTGCATCCACCCTCTGGAGAGCAAC 740
Query 114 AAACAACTCCTCGCCAGATTCATTTGCCTCAACATGCAGTAATTCTAATTCTAACTCCAGTTCACCAGTTTCCT 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAACAACTCCTCGCCAGATTCATTTGCCTCAACATGCAGTAATTCTAATTCTAACTCCAGTTCACCAGTTTCCT 814
Query 188 TAAAGCCTGAGGAAGAGCATCAGACTGATGAGAAACAG---TTCCAGAT---TGAAAAATGGCAGATTGCCCGT 255
|||||||||||||||||||||||||||||||||||||| ||.|||.| |||||.|..|||..|| |..|
Sbjct 815 TAAAGCCTGAGGAAGAGCATCAGACTGATGAGAAACAGGTATTACAGGTATCTGAAACAAAGCACCTT--CAAT 886
Query 256 TGTAACAAGAGCAAGC-CTCAGAAGTTTATT----AAT-----GATTTAATGCAAGTACTTTACACAAATGA-A 318
|.||| |.|.||| || |.|.|||.|| ||| |..||..||..||| .|.||| || |
Sbjct 887 TCTAA----ATCTAGCACT--GGATTTTGTTGGAGAATCTGCAGCCTTCCTGGCAGT------GAGAAA-GACA 947
Query 319 TACATGGCCACTCACAGCCT----GACAGGGGCAAAAT------CCTCTACTTCAAGGGACAAA-------GCT 375
.|||||..||.|.||||.|| ||||...|.||.|| .||||.|| |||||||.|| |||
Sbjct 948 GACATGTGCAGTGACAGGCTGTAAGACATATGTAACATTGCTGAGCTCTCCT--AAGGGACCAACAAGCTTGCT 1019
Query 376 G------------------------------------------TAAAACCAG---------------------- 385
| |.|||||||
Sbjct 1020 GAAGAAGCTGCATGTAGATTCCACCCTCAGTACTAGTGATGCATCAAACCAGAGAATTTCTGCCAGTCAAATAA 1093
Query 386 -------CTATG-----------AATCAGAAT------------------------------------------ 399
.|||| |||.||.||
Sbjct 1094 GCATGCAATATGGTTTCTTTGGAAATAAGCATTTCCCAATCCCCAAATACCCCTCTGTACAGTTAATCTAACAG 1167
Query 400 GA-AGTCCAAGA-----AATCATAGGAG---------------------------------TAACAAAACA--- 431
|| |||| ||| .|||||||.|| ||||.||.||
Sbjct 1168 GATAGTC--AGAGCTCTTATCATAGCAGCCAAAACTTCAGCCCATAGGTTAGTCATTGTCCTAACCAATCATTG 1239
Query 432 -------ATTAT----------TTCCCAATACGGAT----GATGTTTCAATTAGGAGAATGATAGG---GCAAA 481
||||| ||||||.||..|.| |||.| ||||.|.||..|.|.| |||||
Sbjct 1240 TACATTGATTATTACCAGTGACTTCCCATTATAGTTTTTGGATCT-----TTAGCATAAGCACATGCTTGCAAA 1308
Query 482 AGCTAAACA-----------ACTGT-----------------ACCAAG-AAGCC--AAATTT------------ 512
|| |||||| |.||| ||.||| .|||| ||||.|
Sbjct 1309 AG-TAAACAGTGAAATAATTAATGTTGGCAAATATGAGAACAACAAAGTCAGCCCAAAATCTGATAATCATGTC 1381
Query 513 -----AAGCAAAAATCTT---------AACTCTCAGGA-TATTAAC---------------------------- 543
|||.||.|||.|| ||.|..||||| |||| |
Sbjct 1382 TAACCAAGTAATAATGTTTTAGCAATAAAATTACAGGATTATT--CTGTTATCTAAAAATGTATAAAATGGGAA 1453
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1454 TATGAAAAAAATGACAACAGCAAGATGTTTTATTTTAATGTTAAGCAATTCCACCACACTTCTGAAGAATAAAC 1527
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1528 CTAAGTTTTTGTGATTGTTAAAACAATGCATCAATTTTCAGGGAAATCTTTTTGTTTGTTTATTTACCAGACAT 1601
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1602 GTTCTAACTTTGTATTGCCCAAAGTATATTAAATACAGATGTGTAATATAAAGCATCAATATCACCTAACACAT 1675
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1676 CGTATATAAGATATAACATGATAGATAGTTGGTCGATTACATTGCTATACTGCTTAGTTTTAACTGGTTTATTT 1749
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1750 TTATTGTAGCAGAAATGAACTGAAAAAAAATATGGGTTTGATAATCACACACATGAAAGTACCATTTTGTAACT 1823
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1824 CAACAAAAGATAAAACATTCTTCATCAAAAGGCTTCTCGCTTGGTGTCAGGTTGTCACATGTGACCACTGTGCA 1897
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1898 ATGCGAAGCCATACTTCTTCAGTGCACAAAGTCATGTTTAAACTTGGAAAAGAGGATGCTACAGTAGTTTCAAA 1971
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1972 GTTCAGTGTTGTGGACCCAGGAAATTTTCCATAAGTCTTGCTTGATAACAATGTGATTGTACAAAATAAATGTT 2045
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2046 CTTAAGGAAACAACTTATGTAACATTTGCTACCTTTATGTAAACATAAATAAATCCCATTTAAAAGATAAAACT 2119
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2120 TATTTTCTTGTTTCTTTATTAATGCATAAAAATTAGGGAAATATTTTTTTCTAGGCTGATAGCTTTTTCACTCA 2193
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2194 TCCATTAAGGCATTACCATTACGATTTGACTATGTAGCTCTGACTCATTTTTCTTGTAAAGAGCCATGCTATGT 2267
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2268 AGGATATATAGACAACGTCCAGGAAAGTAAATACATTTAATATTTTTATTGAGAAAGGATAATCTTACTAAGAT 2341
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2342 GTATGCTATTTGCTTTATTAAAAATGCTACTTGATAATGTAAGTTTTGCCTACTAAAGGTAAATAAAATTACTT 2415
Query 544 -------- 543
Sbjct 2416 TTGCAAAA 2423
