Nucleotide Global Alignment

Description

Query:
TRCN0000476080
Subject:
XM_011534375.3
Aligned Length:
2059
Identities:
1584
Gaps:
467

Alignment

Query    1  ATGAGCGCCTCGGGCGTACTGTCCTTTACCCAGCAAGGATGGGAGCAGGTGCTGGCCAAAGTGAAACGGGCTGT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAGCGCCTCGGGCGTACTGTCCTTTACCCAGCAAGGATGGGAGCAGGTGCTGGCCAAAGTGAAACGGGCTGT  74

Query   75  GGTTTACCTGGACGCCGCCTGCGCCGAGAGCCTGCACTGGGGCTGCGGATCCACCCGTCTCCTGGAGGCGGTGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGTTTACCTGGACGCCGCCTGCGCCGAGAGCCTGCACTGGGGCTGCGGATCCACCCGTCTCCTGGAGGCGGTGG  148

Query  149  GGGGTCCTGACTGTCACCTGCGAGAGTTCGAGCCCGACGCAATTGGTGGTGGAGCCAAGCAGCCCAAGGCAGTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGGGTCCTGACTGTCACCTGCGAGAGTTCGAGCCCGACGCAATTGGTGGTGGAGCCAAGCAGCCCAAGGCAGTG  222

Query  223  TTTGTGCTGAGCTGCCTGCTGAAAGGCCGGACCGTGGAGATCCTACGGGACATCATCTGCCGCAGTCACTTCCA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTTGTGCTGAGCTGCCTGCTGAAAGGCCGGACCGTGGAGATCCTACGGGACATCATCTGCCGCAGTCACTTCCA  296

Query  297  GTATTGTGTGGTGGTCACAACCGTGAGCCACGCTGTCCACCTCACAGCTAATCATGTCCCAGCGGCGGCAGCGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTATTGTGTGGTGGTCACAACCGTGAGCCACGCTGTCCACCTCACAGCTAATCATGTCCCAGCGGCGGCAGCGG  370

Query  371  CCGAGATGGAGGGGCAGCAGCCGGTGTTCGAGCAGCTGGAGGAGAAGCTGTGTGAATGGATGGGCAACATGAAC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCGAGATGGAGGGGCAGCAGCCGGTGTTCGAGCAGCTGGAGGAGAAGCTGTGTGAATGGATGGGCAACATGAAC  444

Query  445  TACACGGCCGAGGTGTTCCATGTCCCGTTATTGCTTGCCCCTGTTGCTCCCCACTTTGCCTTGACTCCAGCTTT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TACACGGCCGAGGTGTTCCATGTCCCGTTATTGCTTGCCCCTGTTGCTCCCCACTTTGCCTTGACTCCAGCTTT  518

Query  519  TGCATCCCTTTTCCCACTGCTACCCCAGGATGTGCACCTCCTTAATAGCGCCCGACCGGACAAGAGGAAGCTGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGCATCCCTTTTCCCACTGCTACCCCAGGATGTGCACCTCCTTAATAGCGCCCGACCGGACAAGAGGAAGCTGG  592

Query  593  GAAGCCTGGGTGATGTGGACTCCACTACGCTAACCCCAGAGCTGCTGCTGCAGATCAGATGCCTAGTGTCAGGC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAAGCCTGGGTGATGTGGACTCCACTACGCTAACCCCAGAGCTGCTGCTGCAGATCAGATGCCTAGTGTCAGGC  666

Query  667  CTCAGTTCTCTGTGTGAACATTTAGGAGTACGGGAGGAGTGTTTTGCTGTAGGTTCCTTAAGTCAGGTCATCGC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTCAGTTCTCTGTGTGAACATTTAGGAGTACGGGAGGAGTGTTTTGCTGTAGGTTCCTTAAGTCAGGTCATCGC  740

Query  741  TGCGGATCTGGCCAATTATGCCCCTGCAAAGAACAGGAAGAAGACTGCTGCAGGCAGGGCATCAGTGGTTTTTG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGCGGATCTGGCCAATTATGCCCCTGCAAAGAACAGGAAGAAGACTGCTGCAGGCAGGGCATCAGTGGTTTTTG  814

Query  815  TGGACAGAACCCTGGATCTCACAGGAGCAGTTGGACATCATGGAGACAACTTAGTAGAGAAGATCATTTCAGCA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGGACAGAACCCTGGATCTCACAGGAGCAGTTGGACATCATGGAGACAACTTAGTAGAGAAGATCATTTCAGCA  888

Query  889  CTTCCCCAGCTCCCAGGCCACACAAATGATGTGATGGTTAACATGATAGCGCTCACTGCACTCCATACTGAGGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTTCCCCAGCTCCCAGGCCACACAAATGATGTGATGGTTAACATGATAGCGCTCACTGCACTCCATACTGAGGA  962

Query  963  GGAAAATTATAATGTGGTTGCACCAGGCTGTCTTTCACAATCCAGTGACACCACAGCCAAAGCCCTATGGGAAG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGAAAATTATAATGTGGTTGCACCAGGCTGTCTTTCACAATCCAGTGACACCACAGCCAAAGCCCTATGGGAAG  1036

Query 1037  CTTTACTGAACACTAAGCACAAAGAGGCAGTGATGGAAGTTCGGAGACATCTAGTGGAAGCGGCAAGCAGAGAA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTTTACTGAACACTAAGCACAAAGAGGCAGTGATGGAAGTTCGGAGACATCTAGTGGAAGCGGCAAGCAGAGAA  1110

Query 1111  AACCTGCCAATCAAGATGAGTATGGGGAGAGTCACACCGGGACAGCTCATGTCCTATATTCAGCTCTTCAAGAA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AACCTGCCAATCAAGATGAGTATGGGGAGAGTCACACCGGGACAGCTCATGTCCTATATTCAGCTCTTCAAGAA  1184

Query 1185  CAACCTCAAAGCTCTAATGAATCATTGTGGCCTCCTCCAGCTTGGACTGGCCACAGCTCAAACGTTGAAACACC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CAACCTCAAAGCTCTAATGAATCATTGTGGCCTCCTCCAGCTTGGACTGGCCACAGCTCAAACGTTGAAACACC  1258

Query 1259  CACAGACTGCCAAGTGGGACAACTTTCTGGCTTTTGAAAGGCTCCTTCTTCAGAGCATTGGGGAGTCAGCAATG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CACAGACTGCCAAGTGGGACAACTTTCTGGCTTTTGAAAGGCTCCTTCTTCAGAGCATTGGGGAGTCAGCAATG  1332

Query 1333  TCCGTTGTGTTAAATCAGCTGCTGCCCATGATTAAGCCTGTAACCCAGAGAACCAACGAGGACTACAGCCCTGA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TCCGTTGTGTTAAATCAGCTGCTGCCCATGATTAAGCCTGTAACCCAGAGAACCAACGAGGACTACAGCCCTGA  1406

Query 1407  GGAACTGCTGATCCTTCTCATATATATTTATTCTGTCACTGGAGAGCTCACAGTAGACAAAGACCTGTGTGAAG  1480
            |||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1407  GGAACTGCTGATCCTTCTCATATATATTTATTCTGTCACTGGAGAGCTCACGGTAGACAAAGACCTGTGTGAAG  1480

Query 1481  CAGAAGAAAAAGTCAAGAAAGCATTGGCTCAGGTCTTCTGTGAGGAATCTGGATTGTCACCTTTGCTGCAAAAA  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CAGAAGAAAAAGTCAAGAAAGCATTGGCTCAGGTCTTCTGTGAGGAATCTGGATTGTCACCTTTGCTGCAAAAA  1554

Query 1555  ATTACGG--ACTG-----GGACTCTTCAATTAATCTGACATTTCACAAATCCAAAATTGCCGTGGATGAACTCT  1621
            |||||||  .|||     |||||    .|||||   |.||.|         ||.|.||||.             
Sbjct 1555  ATTACGGGTGCTGAAGGAGGACT----GATTAA---GGCAAT---------CAGATTTGCA-------------  1599

Query 1622  TTACTTCACTTCGGGATATTGCTGGAGCTCGGAGTCTCCTGAAACAGTTTAAGTCTGTATATGTTCCTGGAAAT  1695
                                                                                      
Sbjct 1600  --------------------------------------------------------------------------  1599

Query 1696  CATACCCACCAGGCATCTTATAAGCCATTGTTGAAGCAAGTTGTGGAGGAAATATTTCATCCCGAGAGGCCAGA  1769
                                                                                      
Sbjct 1600  --------------------------------------------------------------------------  1599

Query 1770  TTCCGTTGATATTGAACACATGTCTTCAGGCCTCACTGATCTCCTTAAAACTGGATTTAGCATGTTCATGAAGG  1843
                                                                                      
Sbjct 1600  --------------------------------------------------------------------------  1599

Query 1844  TGAGCCGGCCTCATCCTAGTGACTACCCCCTCCTGATCCTCTTTGTGGTAGGTGGGGTCACAGTCTCTGAAGTG  1917
                                                                                      
Sbjct 1600  --------------------------------------------------------------------------  1599

Query 1918  AAAATGGTCAAAGATCTTGTGGCATCGTTGAAGCCAGGAACCCAGGTAATCGTGCTGTCCACACGACTCCTGAA  1991
                                                                                      
Sbjct 1600  --------------------------------------------------------------------------  1599

Query 1992  GCCACTTAACATTCCTGAGCTGTTATTTGCAACTGACCGACTGCATCCAGACCTTGGCTTC  2052
                                                                         
Sbjct 1600  -------------------------------------------------------------  1599

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