Nucleotide Global Alignment
Description
- Query:
- TRCN0000476385
- Subject:
- XM_011532306.2
- Aligned Length:
- 3151
- Identities:
- 1539
- Gaps:
- 1589
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCACCCCGATGCGACCGACAGTGGCGGCGCCGGCCCCAGCCCCGCGCGGGCCGCAGGCGCCGGCGGCCGTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTCTCGGGCTTCAGGGGCGAGCGGCGGCCGGAGTCCCCGGGGGACGCGGAGGCAGCAGCAGCGGCGGCGCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCCCCGGGCGGCCGGAGCTGGTGGAAGCCCGTGGCGGTGGCCGCACTCGCCGCCGTGGCCCTCTCCTTCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCCCGGCAGCGGGGAGGCGGCGGGGGCCGCGGGGCTGAGCTCCGTCCTGTTCAGGCTCAGCCTGTACCTGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCGCGGCGGCCGCCTTCCTGCTGGGGATCCTGTTTGCCCTCGTCTGCCGGAGCCCGCGCGCCCAGCCGCCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTTCGCCGCCGCCTGGAGCCGGCTGGCCGCGACCTCAGCCGCCCGCCGCCCGCCGGGGAGTCCTGTGTATGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTCACATGAGTCAGCTCAGTCTAGAAGGGTAGTAATTTCTCATAATATGGATAAAGCTCTGAAAGAAGTGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGACTACAGTTATAGAGATTACATTCTGTCCTGGTATGGAAACCTCAGCAGAGATGAGGGACAACTTTACCATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTCTTGGAAGACTTTTGGGAAATTGCCAGACAGCTGCACCACAGACTGAGTCACGTGGATGTGGTTAAAGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCTGCAATGATGTTGTGAGGACTTTACTCACTCATTTCTGTGACCTGAAAGCTGCCAATGCCAGACATGAAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAGCCAAGACCTTTTGTGTTGCACGCATGCTTGAGGAACTCAGATGATGAAGTAAGATTTCTACAAACGTGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCGGGTTCTGGTGTTTTGTCTCCTCCCCTCAAAGGATGTGCAGTCTCTCAGCTTACGTATAATGCTTGCAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTCTCACAACAAAAGTCTTGAAGCCGGTAGTGGAGTTACTGAGTAATCCAGATTACATTAACCAAATGCTGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCCCAGCTGGCGTACAGAGAGCAAATGAATGAGCATCACAAGAGAGCCTACACCTATGCCCCCTCTTACGAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTTCATCAAGCTCATTAACAGCAACTCTGATGTGGAGTTCTTGAAGCAACTAAGGGAAAGCGTACAAACATCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCCTCCTGATTCTTGAACCGAACTCAGCACTTGCAAAGTCGTATCCTCCTCTGGAGAAAGAAAACCGAGTGAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCCAGGTATCAAATTGTAGTGGAAATAATCCAGGCGACTACAATTAGCAGCTTTCCCCAACTGAAGAGGCACA 1258
Query 1 --------------------ATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTG 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAGGTAAAGAAACTGCGGCAATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTG 1332
Query 55 ACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGG 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGG 1406
Query 129 GGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGA------------------------------------AGA 166
||||||||||||||||||||||||||||||||||| |||
Sbjct 1407 GGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGAAGCAGAAGCTACAGATAGAAGGTTCAATATCTCCACAGA 1480
Query 167 TTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGAC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGAC 1554
Query 241 AAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATT 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATT 1628
Query 315 AGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAA 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAA 1702
Query 389 TTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTA 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTA 1776
Query 463 AAGGACAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACA 536
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AAGGATAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACA 1850
Query 537 TGCCTCACAGATGATTTCCAACAAGGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATG 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGCCTCACAGATGATTTCCAACAAGGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATG 1924
Query 611 GTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATAT 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATAT 1998
Query 685 AAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGA 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGA 2072
Query 759 AATAATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATAGCAAGAACGGATTGGTGGTGTGAAAACC 832
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 2073 AATAATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATGGCAAGAACGGATTGGTGGTGTGAAAACC 2146
Query 833 TTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTT 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTT 2220
Query 907 GTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTT 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTT 2294
Query 981 TCAGAATTTACACCGGAAACTCAGTGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGC 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TCAGAATTTACACCGGAAACTCAGTGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGC 2368
Query 1055 TGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTAC-------- 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTACAGAATCTG 2442
Query 1121 -------------------------------------------------------------------------- 1120
Sbjct 2443 CTTTCAGATGAAAGACTGTGTCAGAGTGAAGCACTTTATGCCTTCTTGAGCCCTTCTCCTGACTACCTCAAGGT 2516
Query 1121 -------------------------------------------------------------------------- 1120
Sbjct 2517 TATCGACGTGCAGGGGAAAAAAAATTCTTTTTCATTATCCTCATTTTTGGAAAGACTTCCTCGCGACTTCTTCT 2590
Query 1121 ---------AGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGAC 1185
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CCCACCAGGAGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGAC 2664
Query 1186 GCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAG 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 GCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAG 2738
Query 1260 AACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGA 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGA 2812
Query 1334 TTTTCAGTGAGCAAATGTTGGTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCA 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TTTTCAGTGAGCAAATGTTGGTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCA 2886
Query 1408 CCACCGACCACAATCAGAAGCAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAA 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CCACCGACCACAATCAGAAGCAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAA 2960
Query 1482 CATTCCAGATATGCTTCAGAGCCTTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCAC 1555
|||||||| .|||.||||..|.||.
Sbjct 2961 CATTCCAG--------------------------------------------------GAAACATTCTTTACAA 2984
Query 1556 TGCAAGAAACAAGAGCCAACAAGCAT-CTGTTATATGCGC---TGATGGAACTGCTGCTAATTGAACTGTGTCC 1625
||.||.|||.||| .|.||| ||.||.||.|| | |..||..||| |||||| |||.| |.|.|
Sbjct 2985 TGAAAAAAAAAAG-------GATCATACTCTTTTAAGC-CATTTTTTGTCACT--TGCTAA--GAAGT-TATAC 3045
Query 1626 TGAGCTGAGAGTTCATTTAGATCAACTTAAAGCTGGCCAAGTT 1668
Sbjct 3046 ------------------------------------------- 3045
