Nucleotide Global Alignment

Description

Query:
TRCN0000476385
Subject:
XM_024454240.1
Aligned Length:
1869
Identities:
1666
Gaps:
201

Alignment

Query    1  ATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTGACTGTGGCAAAGAAGCAGTG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTGACTGTGGCAAAGAAGCAGTG  74

Query   75  TGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGGGGCCCTGGATGAGGGGGAAG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGGGGCCCTGGATGAGGGGGAAG  148

Query  149  GGCCTCAAAGCCAGA------------------------------------AGATTCTTCAGTTTGAAGATATC  186
            |||||||||||||||                                    |||||||||||||||||||||||
Sbjct  149  GGCCTCAAAGCCAGAAGCAGAAGCTACAGATAGAAGGTTCAATATCTCCACAGATTCTTCAGTTTGAAGATATC  222

Query  187  TTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTT  260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTT  296

Query  261  TTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGA  334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGA  370

Query  335  ATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGA  408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGA  444

Query  409  AATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAGGACAGGTATTACCCTTC  482
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  445  AATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAGGATAGGTATTACCCTTC  518

Query  483  ATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACATGCCTCACAGATGATTTCCA  556
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACATGCCTCACAGATGATTTCCA  592

Query  557  ACAAGGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAA  630
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACAAGGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAA  666

Query  631  CAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAAAGGCAAGCTCTAAATTC  704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAAAGGCAAGCTCTAAATTC  740

Query  705  TATTCAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAG  778
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TATTCAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAG  814

Query  779  AACGCACAGACCTTCAGCTGCACATAGCAAGAACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCC  852
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AACGCACAGACCTTCAGCTGCACATGGCAAGAACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCC  888

Query  853  ATCACCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGA  926
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ATCACCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGA  962

Query  927  AGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAAC  1000
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAAC  1036

Query 1001  TCAGTGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGAT  1074
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCAGTGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGAT  1110

Query 1075  CAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTAC----------------------------  1120
            ||||||||||||||||||||||||||||||||||||||||||||||                            
Sbjct 1111  CAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTACAGAATCTGCTTTCAGATGAAAGACTGTG  1184

Query 1121  --------------------------------------------------------------------------  1120
                                                                                      
Sbjct 1185  TCAGAGTGAAGCACTTTATGCCTTCTTGAGCCCTTCTCCTGACTACCTCAAGGTTATCGACGTGCAGGGGAAAA  1258

Query 1121  ---------------------------------------------------------------AGGAGGAGACA  1131
                                                                           |||||||||||
Sbjct 1259  AAAATTCTTTTTCATTATCCTCATTTTTGGAAAGACTTCCTCGCGACTTCTTCTCCCACCAGGAGGAGGAGACA  1332

Query 1132  GAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTT  1205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTT  1406

Query 1206  CATGTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTC  1279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CATGTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTC  1480

Query 1280  AGGTCACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGATTTTCAGTGAGCAAATGTTG  1353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AGGTCACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGATTTTCAGTGAGCAAATGTTG  1554

Query 1354  GTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCACCGACCACAATCAGAAG  1427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCACCGACCACAATCAGAAG  1628

Query 1428  CAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACATTCCAGATATGCTTCAGA  1501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACATTCCAGATATGCTTCAGA  1702

Query 1502  GCCTTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGCAAGAAACAAGAGCCAAC  1575
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GCCTTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGCAAGAAACAAGAGCCAAC  1776

Query 1576  AAGCATCTGTTATATGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTGAGAGTTCATTTAGATCA  1649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AAGCATCTGTTATATGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTGAGAGTTCATTTAGATCA  1850

Query 1650  ACTTAAAGCTGGCCAAGTT  1668
            |||||||||||||||||||
Sbjct 1851  ACTTAAAGCTGGCCAAGTT  1869

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