Nucleotide Global Alignment
Description
- Query:
- TRCN0000476458
- Subject:
- NM_001353684.1
- Aligned Length:
- 4796
- Identities:
- 1825
- Gaps:
- 2947
Alignment
Query 1 ATGGGAAACGCAGAAAGTCAAGACAGAGAGCACGAGTTTTATGGAGAAAAGCATGCCAGCCTGGGGCGCAAGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CACTTCCCGCTCCCTGCGCCTCTCGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAAGGTGATCCACA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGAACTCCGAAGTGAGCACCCGATCCAGCAGCACCCCCAGCATCCCCCAGTCCCTGGCTGAAAATGGCCTGGAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CCCTTCTCCCAAGATGGTACCCTAGAAGACTTCGGGAGCCCCATCTGGGTGGACCGAGTGGACATGGGCTTGAG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 ACCTGTGTCTTACACTGACTCTTCTGTCACTCCCAGCGTAGACAGCAGCATCGTCCTCACAGCAGCCTCTGTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGAGCATGCCAGACACTGAGGAGAGCAGGCTTTACGGGGATGACGCTACATATTTGGCTGAGGGAGGCAGGAGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CAGCATTCCTATACATCCAATGGGCCCACTTTCATGGAGACGGCGAGCTTTAAGAAGAAACGCTCCAAATCTGC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AGACATCTGGCGGGAGGACAGCCTGGAATTCTCACTCTCTGATCTGAGCCAAGAACATTTAACAAGCAACGAAG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AAATCTTGGGTTCCGCCGAAGAGAAGGACTGCGAGGAGGCTCGGGGGATGGAAACGCGGGCGAGTCCGCGGCAG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CTCAGCACCTGTCAGAGAGCCAATTCCTTGGGTGACTTGTATGCTCAGAAAAACTCTGGAGTGACAGCAAACGG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GGGGCCGGGGAGCAAATTTGCAGGCTACTGTCGGAATTTGGTGTCTGATATTCCCAATCTTGCAAACCATAAGA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TGCCACCAGCTGCTGCTGAAGAGACTCCTCCGTACAGTAATTATAACACACTTCCCTGTAGGAAATCTCACTGT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 CTCTCTGAAGGTGCCACCAACCCACAAATTAGCCATAGCAACAGCATGCAAGGCAGAAGAGCTAAAACAACTCA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGATGTTAATGCAGGCGAGGGCAGTGAGTTTGCAGACAGTGGGATTGAAGGGGCCACTACCGACACGGACCTCC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 TGTCCAGGCGATCTAATGCCACCAACTCCAGCTACTCACCCACCACAGGCCGGGCCTTTGTGGGCAGCGACAGC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGGTGTACGAGAACTTCCGGCGGGAGCTGGAGATGAGCAC 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 CACCAACAGCGAGAGCCTGGAGGAGGCCGGCTCGGCGCACAGCGATGAGCAGAGCAGCGGCACCCTGAGCTCTC 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CGGGCCAGTCGGACATCCTGCTGACCGCCGCACAGGGCACGGTGCGCAAGGCCGGCGCCCTGGCCGTCAAGAAC 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 TTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAAGTGGAAGCACTACTGGGTGTCCCT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 GAAAGGATGCACGCTATTTTTCTACGAGAGCGACGGCAGGTCTGGGATAGACCACAACAGCATCCCCAAACACG 1480
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1481 CCGTCTGGGTGGAGAACAGCATTGTGCAGGCGGTGCCTGAGCACCCCAAGAAGGACTTTGTCTTCTGCCTCAGC 1554
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1555 AATTCCCTGGGTGATGCCTTCCTTTTTCAGACCACTAGCCAGACGGAGCTTGAAAACTGGATCACCGCCATCCA 1628
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1629 CTCTGCCTGCGCCACTGCGGTCGCGAGGCACCACCACAAGGAAGACACGCTCCGACTCCTGAAATCAGAGATCA 1702
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1703 AAAAACTGGAACAGAAGATTGACATGGATGAAAAGATGAAGAAAATGGGTGAAATGCAGCTGTCTTCAGTCACT 1776
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1777 GACTCAAAGAAAAAGAAAACAATATTAGATCAGATCTTTGTCTGGGAGCAAAATCTCGAGCAGTTCCAAATGGA 1850
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1851 CCTGTTTCGTTTCCGCTGTTATTTAGCCAGCCTTCAGGGTGGGGAGCTGCCAAACCCCAAAAGGCTTCTCGCTT 1924
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1925 TTGCAAGTCGACCAACGAAAGTGGCCATGGGCCGCCTTGGAATCTTTTCGGTATCATCGTTTCATGCCCTGGTG 1998
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1999 GCAGCACGCACTGGTGAAACTGGAGTGAGAAGACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGCGAAGGAG 2072
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2073 CAGGTTTTCTTCTCTGTGGGGTCTGGATACTACCTCCAAAAAGAAGCAGGGACGGCCAAGCATCAATCAGGTGT 2146
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2147 TTGGAGAGGGAACCGAAGCTGTAAAGAAATCTTTAGAGGGAATATTTGATGACATTGTTCCAGATGGCAAGAGG 2220
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2221 GAGAAAGAAGTGGTCTTACCTAACGTTCACCAGCACAACCCTGACTGCGACATTTGGGTCCACGAGTATTTCAC 2294
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2295 TCCATCCTGGTTCTGTCTGCCCAATAATCAGCCTGCCCTGACGGTCGTCCGGCCAGGCGACACTGCACGGGACA 2368
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2369 CCCTGGAGCTGATTTGCAAGACACATCAACTGGATCATTCTGCTCATTACCTGCGCCTGAAATTTCTAATAGAA 2442
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2443 AACAAAATGCAGCTCTATGTTCCACAGCCCGAGGAAGACATCTATGAGCTGCTGTACAAAGAAATTGAAATCTG 2516
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2517 TCCAAAAGTCACTCAGAGCATCCACATTGAGAAGTCAGATACAGCTGCTGATACTTACGGGTTTTCACTTTCTT 2590
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2591 CTGTGGAAGAAGATGGTATTCGAAGGCTGTACGTGAATAGTGTGAAGGAAACCGGTTTAGCTTCCAAGAAAGGC 2664
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2665 CTGAAAGCAGGAGATGAGATTCTTGAGATCAATAATCGTGCTGCTGACGCCCTGAACTCTTCTATGCTCAAAGA 2738
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2739 TTTCCTCTCACAGCCCTCGCTGGGCCTCCTGGTGAGGACCTACCCCGAGCTGGAGGAAGGAGTGGAGCTGCTGG 2812
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2813 AAAGCCCGCCCCACCGAGTGGACGGCCCTGCCGACCTTGGCGAGAGCCCCCTCGCCTTTCTCACCAGCAACCCA 2886
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2887 GGGCACAGCCTTTGCAGCGAGCAGGGCAGCAGTGCTG----AGACCGCTCCAGAGGAGACCGAGGGGCCAGACT 2956
|..|.|.|.|||.|| || |.|..||.|.| |.||||..|
Sbjct 1 -------------------ATGATGTCTGCACTG-TGGAAAATAAAGCGCAA-------------GCCCAGGAT 41
Query 2957 TGGAATCCTCAGATGA----------GACT---------GATCACAGCAGCAAGAGTACAGAACAGGTGGCCGC 3011
||.||.| .|||| |||| ||.|||..||.| .|||||||||||||||||||||
Sbjct 42 TGAAAAC----AATGACAAGTCCGGTGACTCTATGTATCGAACACTTCATC-TGAGTACAGAACAGGTGGCCGC 110
Query 3012 ATTTTGCCGCAGTTTGCATGAGATGAACCCCTCTGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCCTCAGC 3085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 111 ATTTTGCCGCAGTTTGCATGAGATGAACCCCTCTGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCCTCAGC 184
Query 3086 TGGCGACCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCTCCTGGAGACGGAGCGC 3159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 TGGCGACCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCTCCTGGAGACGGAGCGC 258
Query 3160 ACCTACGTGAAGGATTTAAACTGTCTTATGGAGAGATACCTAAAGCCTCTTCAAAAAGAAACTTTTCTCACCCA 3233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 ACCTACGTGAAGGATTTAAACTGTCTTATGGAGAGATACCTAAAGCCTCTTCAAAAAGAAACTTTTCTCACCCA 332
Query 3234 GGATGAGCTTGACGTGCTTTTTGGAAATTTAACGGAAATGGTAGAGTTTCAAGTAGAATTCCTTAAAACTCTAG 3307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 333 GGATGAGCTTGACGTGCTTTTTGGAAATTTAACGGAAATGGTAGAGTTTCAAGTAGAATTCCTTAAAACTCTAG 406
Query 3308 AAGATGGAGTGAGACTGGTACCTGATTTGGAAAAGCTTGAGAAGGTTGATCAATTTAAGAAAGTGCTGTTCTCT 3381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 AAGATGGAGTGAGACTGGTACCTGATTTGGAAAAGCTTGAGAAGGTTGATCAATTTAAGAAAGTGCTGTTCTCT 480
Query 3382 CTGGGGGGATCATTCCTGTATTATGCTGACCGCTTCAAGCTCTACAGTGCCTTCTGCGCCAGCCACACAAAAGT 3455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CTGGGGGGATCATTCCTGTATTATGCTGACCGCTTCAAGCTCTACAGTGCCTTCTGCGCCAGCCACACAAAAGT 554
Query 3456 TCCCAAGGTCCTGGAGAAAGTCAAGACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAGAACCCGAAGCAGC 3529
||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 TCCCAAGGTCCTGGTGAAAGCCAAGACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAGAACCCGAAGCAGC 628
Query 3530 AGCACTCATCCACGCTGGAGTCGTACCTCATCAAGCCCATCCAGAGGATCCTCAAGTACCCACTTCTGCTCAGG 3603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 AGCACTCATCCACGCTGGAGTCGTACCTCATCAAGCCCATCCAGAGGATCCTCAAGTACCCACTTCTGCTCAGG 702
Query 3604 GAGCTGTTCGCCCTGACCGATGCGGAGAGCGAGGAGCACTACCACCTGGACGTGGCCATCAAGACCATGAACAA 3677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 703 GAGCTGTTCGCCCTGACCGATGCGGAGAGCGAGGAGCACTACCACCTGGACGTGGCCATCAAGACCATGAACAA 776
Query 3678 GGTTGCCAGTCACATCAATGAGATGCAGAAAATCCATGAAGAGTTTGGGGCTGTGTTTGACCAGCTGATTGCTG 3751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 GGTTGCCAGTCACATCAATGAGATGCAGAAAATCCATGAAGAGTTTGGGGCTGTGTTTGACCAGCTGATTGCTG 850
Query 3752 AACAGACTGGTGAGAAAAAAGAGGTTGCAGATCTGAGCATGGGAGACCTGCTTTTGCACACTACCGTGATCTGG 3825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 851 AACAGACTGGTGAGAAAAAAGAGGTTGCAGATCTGAGCATGGGAGACCTGCTTTTGCACACTACCGTGATCTGG 924
Query 3826 CTGAACCCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAACCAGAGTTGGCAGCATTCGTCTTCAAAACTGCTGT 3899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 CTGAACCCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAACCAGAGTTGGCAGCATTCGTCTTCAAAACTGCTGT 998
Query 3900 GGTCCTTGTGTATAAAGATGGTTCCAAACAGAAGAAGAAACTTGTAGGATCTCACAGGCTTTCCATTTATGAGG 3973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 999 GGTCCTTGTGTATAAAGATGGTTCCAAACAGAAGAAGAAACTTGTAGGATCTCACAGGCTTTCCATTTATGAGG 1072
Query 3974 ACTGGGACCCCTTCAGATTTCGACACATGATCCCCACGGAAGCGCTGCAGGTTCGAGCTTTGGCGAGTGCAGAT 4047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 ACTGGGACCCCTTCAGATTTCGACACATGATCCCCACGGAAGCGCTGCAGGTTCGAGCTTTGGCGAGTGCAGAT 1146
Query 4048 GCAGAGGCAAATGCCGTGTGTGAAATTGTCCATGTAAAATCCGAGTCTGAAGGGAGGCCGGAGAGGGTCTTTCA 4121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147 GCAGAGGCAAATGCCGTGTGTGAAATTGTCCATGTAAAATCCGAGTCTGAAGGGAGGCCGGAGAGGGTCTTTCA 1220
Query 4122 CTTGTGCTGCAGCTCCCCAGAGAGCCGAAAGGATTTCCTAAAGGCTGTGCATTCAATCCTGCGTGATAAGCACA 4195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221 CTTGTGCTGCAGCTCCCCAGAGAGCCGAAAGGATTTCCTAAAGGCTGTGCATTCAATCCTGCGTGATAAGCACA 1294
Query 4196 GAAGACAGCTCCTCAAAACCGAGAGCCTTCCCTCATCCCAGCAATATGTCCCTTTTGGAGGCAAAAGATTGTGT 4269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1295 GAAGACAGCTCCTCAAAACCGAGAGCCTTCCCTCATCCCAGCAATATGTCCCTTTTGGAGGCAAAAGATTGTGT 1368
Query 4270 GCACTGAAGGGGGCCAGGCCGGCCATGAGCAGGGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGAGGAGGAGGCG 4343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1369 GCACTGAAGGGGGCCAGGCCGGCCATGAGCAGGGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGAGGAGGAGGCG 1442
Query 4344 GCGGCTGGCTCGAAACAGGTTTACCATTGATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAGAGTCCCAGC 4417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 GCGGCTGGCTCGAAACAGGTTTACCATTGATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAGAGTCCCAGC 1516
Query 4418 AGCCCCCCGGTGGTGGGGACACTGACCGATGGGTAGAGGAGCAGTTTGATCTTGCTCAGTATGAGGAGCAAGAT 4491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1517 AGCCCCCCGGTGGTGGGGACACTGACCGATGGGTAGAGGAGCAGTTTGATCTTGCTCAGTATGAGGAGCAAGAT 1590
Query 4492 GACATCAAGGAGACAGACATCCTCAGTGACGATGATGAGTTCTGTGAGTCCGTGAAGGGTGCCTCAGTGGACAG 4565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1591 GACATCAAGGAGACAGACATCCTCAGTGACGATGATGAGTTCTGTGAGTCCGTGAAGGGTGCCTCAGTGGACAG 1664
Query 4566 AGACCTGCAGGAGCGGCTTCAGGCCACCTCCATCAGTCAGCGGGAAAGAGGCCGGAAAACCCTGGATAGTCACG 4639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1665 AGACCTGCAGGAGCGGCTTCAGGCCACCTCCATCAGTCAGCGGGAAAGAGGCCGGAAAACCCTGGATAGTCACG 1738
Query 4640 CGTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAGCGCAAGCGAG 4713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 CGTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAGCGCAAGCGAG 1812
Query 4714 GAAGTCATTTGGGTTAGGCGTGAAGACTTTGCCCCCTCCAGGAAACTGAACACTGAGATC 4773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1813 GAAGTCATTTGGGTTAGGCGTGAAGACTTTGCCCCCTCCAGGAAACTGAACACTGAGATC 1872
