Nucleotide Global Alignment
Description
- Query:
- TRCN0000476458
- Subject:
- NM_001353685.1
- Aligned Length:
- 4797
- Identities:
- 1758
- Gaps:
- 3024
Alignment
Query 1 ATGGGAAACGCAGAAAGTCAAGACAGAGAGCACGAGTTTTATGGAGAAAAGCATGCCAGCCTGGGGCGCAAGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CACTTCCCGCTCCCTGCGCCTCTCGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAAGGTGATCCACA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGAACTCCGAAGTGAGCACCCGATCCAGCAGCACCCCCAGCATCCCCCAGTCCCTGGCTGAAAATGGCCTGGAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CCCTTCTCCCAAGATGGTACCCTAGAAGACTTCGGGAGCCCCATCTGGGTGGACCGAGTGGACATGGGCTTGAG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 ACCTGTGTCTTACACTGACTCTTCTGTCACTCCCAGCGTAGACAGCAGCATCGTCCTCACAGCAGCCTCTGTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGAGCATGCCAGACACTGAGGAGAGCAGGCTTTACGGGGATGACGCTACATATTTGGCTGAGGGAGGCAGGAGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CAGCATTCCTATACATCCAATGGGCCCACTTTCATGGAGACGGCGAGCTTTAAGAAGAAACGCTCCAAATCTGC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AGACATCTGGCGGGAGGACAGCCTGGAATTCTCACTCTCTGATCTGAGCCAAGAACATTTAACAAGCAACGAAG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AAATCTTGGGTTCCGCCGAAGAGAAGGACTGCGAGGAGGCTCGGGGGATGGAAACGCGGGCGAGTCCGCGGCAG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CTCAGCACCTGTCAGAGAGCCAATTCCTTGGGTGACTTGTATGCTCAGAAAAACTCTGGAGTGACAGCAAACGG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GGGGCCGGGGAGCAAATTTGCAGGCTACTGTCGGAATTTGGTGTCTGATATTCCCAATCTTGCAAACCATAAGA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TGCCACCAGCTGCTGCTGAAGAGACTCCTCCGTACAGTAATTATAACACACTTCCCTGTAGGAAATCTCACTGT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 CTCTCTGAAGGTGCCACCAACCCACAAATTAGCCATAGCAACAGCATGCAAGGCAGAAGAGCTAAAACAACTCA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGATGTTAATGCAGGCGAGGGCAGTGAGTTTGCAGACAGTGGGATTGAAGGGGCCACTACCGACACGGACCTCC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 TGTCCAGGCGATCTAATGCCACCAACTCCAGCTACTCACCCACCACAGGCCGGGCCTTTGTGGGCAGCGACAGC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGGTGTACGAGAACTTCCGGCGGGAGCTGGAGATGAGCAC 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 CACCAACAGCGAGAGCCTGGAGGAGGCCGGCTCGGCGCACAGCGATGAGCAGAGCAGCGGCACCCTGAGCTCTC 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CGGGCCAGTCGGACATCCTGCTGACCGCCGCACAGGGCACGGTGCGCAAGGCCGGCGCCCTGGCCGTCAAGAAC 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 TTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAAGTGGAAGCACTACTGGGTGTCCCT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 GAAAGGATGCACGCTATTTTTCTACGAGAGCGACGGCAGGTCTGGGATAGACCACAACAGCATCCCCAAACACG 1480
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1481 CCGTCTGGGTGGAGAACAGCATTGTGCAGGCGGTGCCTGAGCACCCCAAGAAGGACTTTGTCTTCTGCCTCAGC 1554
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1555 AATTCCCTGGGTGATGCCTTCCTTTTTCAGACCACTAGCCAGACGGAGCTTGAAAACTGGATCACCGCCATCCA 1628
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1629 CTCTGCCTGCGCCACTGCGGTCGCGAGGCACCACCACAAGGAAGACACGCTCCGACTCCTGAAATCAGAGATCA 1702
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1703 AAAAACTGGAACAGAAGATTGACATGGATGAAAAGATGAAGAAAATGGGTGAAATGCAGCTGTCTTCAGTCACT 1776
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1777 GACTCAAAGAAAAAGAAAACAATATTAGATCAGATCTTTGTCTGGGAGCAAAATCTCGAGCAGTTCCAAATGGA 1850
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1851 CCTGTTTCGTTTCCGCTGTTATTTAGCCAGCCTTCAGGGTGGGGAGCTGCCAAACCCCAAAAGGCTTCTCGCTT 1924
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1925 TTGCAAGTCGACCAACGAAAGTGGCCATGGGCCGCCTTGGAATCTTTTCGGTATCATCGTTTCATGCCCTGGTG 1998
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1999 GCAGCACGCACTGGTGAAACTGGAGTGAGAAGACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGCGAAGGAG 2072
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2073 CAGGTTTTCTTCTCTGTGGGGTCTGGATACTACCTCCAAAAAGAAGCAGGGACGGCCAAGCATCAATCAGGTGT 2146
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2147 TTGGAGAGGGAACCGAAGCTGTAAAGAAATCTTTAGAGGGAATATTTGATGACATTGTTCCAGATGGCAAGAGG 2220
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2221 GAGAAAGAAGTGGTCTTACCTAACGTTCACCAGCACAACCCTGACTGCGACATTTGGGTCCACGAGTATTTCAC 2294
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2295 TCCATCCTGGTTCTGTCTGCCCAATAATCAGCCTGCCCTGACGGTCGTCCGGCCAGGCGACACTGCACGGGACA 2368
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2369 CCCTGGAGCTGATTTGCAAGACACATCAACTGGATCATTCTGCTCATTACCTGCGCCTGAAATTTCTAATAGAA 2442
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2443 AACAAAATGCAGCTCTATGTTCCACAGCCCGAGGAAGACATCTATGAGCTGCTGTACAAAGAAATTGAAATCTG 2516
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2517 TCCAAAAGTCACTCAGAGCATCCACATTGAGAAGTCAGATACAGCTGCTGATACTTACGGGTTTTCACTTTCTT 2590
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2591 CTGTGGAAGAAGATGGTATTCGAAGGCTGTACGTGAATAGTGTGAAGGAAACCGGTTTAGCTTCCAAGAAAGGC 2664
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2665 CTGAAAGCAGGAGATGAGATTCTTGAGATCAATAATCGTGCTGCTGACGCCCTGAACTCTTCTATGCTCAAAGA 2738
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2739 TTTCCTCTCACAGCCCTCGCTGGGCCTCCTGGTGAGGACCTACCCCGAGCTGGAGGAAGGAGTGGAGCTGCTGG 2812
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2813 AAAGCCCGCCCCACCGAGTGGACGGCCCTGCCGACCTTGGCGAGAGCCCCCTCGCCTTTCTCACCAGCAACCCA 2886
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2887 GGGCACAGCCTTTGCAGCGAGCAGGGCAGCAGTGCTGAGACCGCTCCAGAGGAGACCGAGGGGCCAGACTTGGA 2960
Sbjct 1 -------------------------------------------------------------------------- 0
Query 2961 ATCCTCAGATGA-GACTGATCAC------------AGCAGCAAG---AGTACAGA--------ACAGGTGGCCG 3010
|||| |.||| ||| ||| ||||| ||.|..|| |||.|| |||
Sbjct 1 --------ATGATGTCTG--CACTGTGGAAAATAAAGC-GCAAGCCCAGGATTGAAAACAATGACAAGT--CCG 61
Query 3011 CATTTTGCCGCAGTTTGCATGAGATGAACCCCTCTGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCCTCAG 3084
.||.|.| |.||.|| .||||.|.| ||||| |||||||||||||||||||
Sbjct 62 ----GTGACTC--TATGTAT----CGAACACTT------------CATCT-----GGACTCCACGGGGCCTCAG 108
Query 3085 CTGGCGACCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCTCCTGGAGACGGAGCG 3158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 109 CTGGCGACCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCTCCTGGAGACGGAGCG 182
Query 3159 CACCTACGTGAAGGATTTAAACTGTCTTATGGAGAGATACCTAAAGCCTCTTCAAAAAGAAACTTTTCTCACCC 3232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 CACCTACGTGAAGGATTTAAACTGTCTTATGGAGAGATACCTAAAGCCTCTTCAAAAAGAAACTTTTCTCACCC 256
Query 3233 AGGATGAGCTTGACGTGCTTTTTGGAAATTTAACGGAAATGGTAGAGTTTCAAGTAGAATTCCTTAAAACTCTA 3306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 257 AGGATGAGCTTGACGTGCTTTTTGGAAATTTAACGGAAATGGTAGAGTTTCAAGTAGAATTCCTTAAAACTCTA 330
Query 3307 GAAGATGGAGTGAGACTGGTACCTGATTTGGAAAAGCTTGAGAAGGTTGATCAATTTAAGAAAGTGCTGTTCTC 3380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 331 GAAGATGGAGTGAGACTGGTACCTGATTTGGAAAAGCTTGAGAAGGTTGATCAATTTAAGAAAGTGCTGTTCTC 404
Query 3381 TCTGGGGGGATCATTCCTGTATTATGCTGACCGCTTCAAGCTCTACAGTGCCTTCTGCGCCAGCCACACAAAAG 3454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 405 TCTGGGGGGATCATTCCTGTATTATGCTGACCGCTTCAAGCTCTACAGTGCCTTCTGCGCCAGCCACACAAAAG 478
Query 3455 TTCCCAAGGTCCTGGAGAAAGTCAAGACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAGAACCCGAAGCAG 3528
|||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 TTCCCAAGGTCCTGGTGAAAGCCAAGACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAGAACCCGAAGCAG 552
Query 3529 CAGCACTCATCCACGCTGGAGTCGTACCTCATCAAGCCCATCCAGAGGATCCTCAAGTACCCACTTCTGCTCAG 3602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 553 CAGCACTCATCCACGCTGGAGTCGTACCTCATCAAGCCCATCCAGAGGATCCTCAAGTACCCACTTCTGCTCAG 626
Query 3603 GGAGCTGTTCGCCCTGACCGATGCGGAGAGCGAGGAGCACTACCACCTGGACGTGGCCATCAAGACCATGAACA 3676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 627 GGAGCTGTTCGCCCTGACCGATGCGGAGAGCGAGGAGCACTACCACCTGGACGTGGCCATCAAGACCATGAACA 700
Query 3677 AGGTTGCCAGTCACATCAATGAGATGCAGAAAATCCATGAAGAGTTTGGGGCTGTGTTTGACCAGCTGATTGCT 3750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 701 AGGTTGCCAGTCACATCAATGAGATGCAGAAAATCCATGAAGAGTTTGGGGCTGTGTTTGACCAGCTGATTGCT 774
Query 3751 GAACAGACTGGTGAGAAAAAAGAGGTTGCAGATCTGAGCATGGGAGACCTGCTTTTGCACACTACCGTGATCTG 3824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 GAACAGACTGGTGAGAAAAAAGAGGTTGCAGATCTGAGCATGGGAGACCTGCTTTTGCACACTACCGTGATCTG 848
Query 3825 GCTGAACCCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAACCAGAGTTGGCAGCATTCGTCTTCAAAACTGCTG 3898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 849 GCTGAACCCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAACCAGAGTTGGCAGCATTCGTCTTCAAAACTGCTG 922
Query 3899 TGGTCCTTGTGTATAAAGATGGTTCCAAACAGAAGAAGAAACTTGTAGGATCTCACAGGCTTTCCATTTATGAG 3972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 923 TGGTCCTTGTGTATAAAGATGGTTCCAAACAGAAGAAGAAACTTGTAGGATCTCACAGGCTTTCCATTTATGAG 996
Query 3973 GACTGGGACCCCTTCAGATTTCGACACATGATCCCCACGGAAGCGCTGCAGGTTCGAGCTTTGGCGAGTGCAGA 4046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 997 GACTGGGACCCCTTCAGATTTCGACACATGATCCCCACGGAAGCGCTGCAGGTTCGAGCTTTGGCGAGTGCAGA 1070
Query 4047 TGCAGAGGCAAATGCCGTGTGTGAAATTGTCCATGTAAAATCCGAGTCTGAAGGGAGGCCGGAGAGGGTCTTTC 4120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071 TGCAGAGGCAAATGCCGTGTGTGAAATTGTCCATGTAAAATCCGAGTCTGAAGGGAGGCCGGAGAGGGTCTTTC 1144
Query 4121 ACTTGTGCTGCAGCTCCCCAGAGAGCCGAAAGGATTTCCTAAAGGCTGTGCATTCAATCCTGCGTGATAAGCAC 4194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1145 ACTTGTGCTGCAGCTCCCCAGAGAGCCGAAAGGATTTCCTAAAGGCTGTGCATTCAATCCTGCGTGATAAGCAC 1218
Query 4195 AGAAGACAGCTCCTCAAAACCGAGAGCCTTCCCTCATCCCAGCAATATGTCCCTTTTGGAGGCAAAAGATTGTG 4268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1219 AGAAGACAGCTCCTCAAAACCGAGAGCCTTCCCTCATCCCAGCAATATGTCCCTTTTGGAGGCAAAAGATTGTG 1292
Query 4269 TGCACTGAAGGGGGCCAGGCCGGCCATGAGCAGGGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGAGGAGGAGGC 4342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1293 TGCACTGAAGGGGGCCAGGCCGGCCATGAGCAGGGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGAGGAGGAGGC 1366
Query 4343 GGCGGCTGGCTCGAAACAGGTTTACCATTGATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAGAGTCCCAG 4416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1367 GGCGGCTGGCTCGAAACAGGTTTACCATTGATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAGAGTCCCAG 1440
Query 4417 CAGCCCCCCGGTGGTGGGGACACTGACCGATGGGTAGAGGAGCAGTTTGATCTTGCTCAGTATGAGGAGCAAGA 4490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 CAGCCCCCCGGTGGTGGGGACACTGACCGATGGGTAGAGGAGCAGTTTGATCTTGCTCAGTATGAGGAGCAAGA 1514
Query 4491 TGACATCAAGGAGACAGACATCCTCAGTGACGATGATGAGTTCTGTGAGTCCGTGAAGGGTGCCTCAGTGGACA 4564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1515 TGACATCAAGGAGACAGACATCCTCAGTGACGATGATGAGTTCTGTGAGTCCGTGAAGGGTGCCTCAGTGGACA 1588
Query 4565 GAGACCTGCAGGAGCGGCTTCAGGCCACCTCCATCAGTCAGCGGGAAAGAGGCCGGAAAACCCTGGATAGTCAC 4638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1589 GAGACCTGCAGGAGCGGCTTCAGGCCACCTCCATCAGTCAGCGGGAAAGAGGCCGGAAAACCCTGGATAGTCAC 1662
Query 4639 GCGTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAGCGCAAGCGA 4712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1663 GCGTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAGCGCAAGCGA 1736
Query 4713 GGAAGTCATTTGGGTTAGGCGTGAAGACTTTGCCCCCTCCAGGAAACTGAACACTGAGATC 4773
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1737 GGAAGTCATTTGGGTTAGGCGTGAAGACTTTGCCCCCTCCAGGAAACTGAACACTGAGATC 1797
