Nucleotide Global Alignment

Description

Query:
TRCN0000476467
Subject:
NR_135913.2
Aligned Length:
4269
Identities:
1170
Gaps:
3095

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGAGTAAGCCCCCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCACCTTCCGTCCTCGATCGTTCCCCTTGTGGAAGTAGTCCCGGGTCTCGTGGGATCCTCGCCGCCCGCTCCCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCTGCGCTGTCGGTTCCCCCGCGCCTGGGCGGACCCTAACCCCACCCGGCCCTCCGCACCGCAGCCCCGGCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CACCAGGTCCTCTGCAGACTGGCCGGACAGCCTGGCCTTTTCCAGCTCAGGTTCCTAATCTGTAAAATGGGCGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGCCGTGGGAAGGGGAGGAAGAGGCAGAAAGGCACTGGACTCCAGGAAAGGGGTCGGGGAACGTGCAGGGGTTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGCGCCAGACACACCACGTTCCGGCCAAGTGGCTCCTTACTGGCTGTGAACGTGGGCCAGTCACTGTCTCCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCGCAATCTTCGGACTCATTCCGGAAGGCAGTGTAGCCTAATGGTGGAGGGTTCCGACTCTGGAGCCAGGGTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAAGTCCTCCCTCTTCCTGTGACTTTGAGCGAGTGACTTCACCCCTTGGGCCTCAGCTTCTTCATCTCCAAAAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AATGGCAATCATACTACTGTTTTAGACACAGTAAGTGTTATAAACGTGTTTTTGTTTGTTTGTTTGAGACAAGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTTTTGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCGATCTCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCAATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACAGCGTGCACCACCACGCCAGGCTAATTTTTGTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTCTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTCGGCCTCTCAAAGTGCTGCGATTACAGGCGTGAGCCACTGCGCCCGGTAGTAAACGTGTTTCTTTAAGAATA  962

Query    1  ---------------ATGGGCTG-GATCACAGAAGATCTTATTAGACGGAATGCTGAACACAACGACTGTGTCA  58
                           |.|.|.|| |.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TACTAACAAACTGCAAGGTGATGCGGTCACAGAAGATCTTATTAGACGGAATGCTGAACACAACGACTGTGTCA  1036

Query   59  TTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAGACTAGAACACATTGATAAATGGTGCCGG  132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAGACTAGAACACATTGATAAATGGTGCCGG  1110

Query  133  GATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGGGAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGA  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGGGAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGA  1184

Query  207  ATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAGAAAACTTGGAAGGATGTGAAGAGCTGGCAAAACTTG  280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAGAAAACTTGGAAGGATGTGAAGAGCTGGCAAAACTTG  1258

Query  281  ACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGAGCTC  354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGAGCTC  1332

Query  355  TTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAA  428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAA  1406

Query  429  GTGGTTGGATGGTAAAGAAATAGAGCCTTCAGAAAGGATTAAGGCATTGCAGGACTATTCAGTAATTGAACCAC  502
            |                                                                         
Sbjct 1407  G-------------------------------------------------------------------------  1407

Query  503  AAATCAGAGAGCAGGAAAAAGATCACTGTCTTAAACGAGCCAAACTCAAGGAAGAGGCTCAGAGGAAACACCAA  576
                                                                                      
Sbjct 1408  --------------------------------------------------------------------------  1407

Query  577  GAAGAGGATAAAAATGAAGACAAGAGAAGTAACGCAGGCTTTGATGGACGTTGGTACACAGACATCAATGCTAC  650
                                                                                      
Sbjct 1408  --------------------------------------------------------------------------  1407

Query  651  TCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACA  724
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1408  ---TTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACA  1478

Query  725  ACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGA  798
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1479  ACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGA  1552

Query  799  CACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTT  872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1553  CACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTT  1626

Query  873  GATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGC  946
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1627  GATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGC  1700

Query  947  AGATCATCCTGGACCTTGCTGTCTATAGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTAC  1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1701  AGATCATCCTGGACCTTGCTGTCTATAGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTAC  1774

Query 1021  GTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGC  1094
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1775  GTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGC  1848

Query 1095  TAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGC  1168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1849  TAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGC  1922

Query 1169  GAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGAG  1242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1923  GAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGAG  1996

Query 1243  AAACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACC  1316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1997  AAACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACC  2070

Query 1317  CAGAAGACGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTC  1390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2071  CAGAAGACGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTC  2144

Query 1391  CGCTGATT------------------------------------------------------------------  1398
            ||||||||                                                                  
Sbjct 2145  CGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGAC  2218

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2219  CATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTTTTAACTCTTACT  2292

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2293  TTGCATAGTAATATCCTTAAGATAGCTTAAAATTAAAATGTATGTCTTAAATGCTATAACTCATCATTTACCTA  2366

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2367  TAATAAAGGGTTGGTATTGAAAATGTTTAGTAAGATCATAGAACTATTGCATAAAACACTGATTATAAATACTG  2440

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2441  TCTACTTATGCAAAGTATTAATTCATAGATAAAAGGACTGAGTATTAAATTGGTACTTCAGCAAAGTGGTCAAG  2514

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2515  CTTAGAAGTTAAAACTGTAATTTCAGACCCAATTGGAATACTTTAATATGATTTTAAACAGCATTTCCATTTTC  2588

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2589  CTTCCCATGATGTGTCTGCTTTCTCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACTC  2662

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2663  TATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCTGAGCCTTAGTGGCT  2736

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2737  TCATGTATAATCTGGGAATAATAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGTA  2810

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2811  CAGTGTCAGCCATACATTTAGAGCCTCTTCTCTCTCTCCTTCTTCCCTTTCTCCTCTCTCTTCTCCTCCCTTTC  2884

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2885  TCCTGTCTCTCCTCCTCCCTGCTCCTTCTTCCCCTCCCTCCCCAATTACTTTTCTCCCCTTATTCTTTTTCTTC  2958

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2959  ACCTTTTTACTCCCCATCCCACTCCTTCTCCTCTATTTCCTTCTTTACTTTTTTAATATCCTACCTCTTCTTTA  3032

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3033  TCTAGAACATTATGAATTCAATATTTCACATACATTGTAGGACAAATTACTGTTACTCTGATCATGATATAGCA  3106

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3107  ACATTTAAGTCAGTTTCCCCAAATATTCATTCAACAAATACTTATTGAGCAACTATTGAGTGCTAGCCCCCTCT  3180

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3181  CTGTTCATCAGGGATTTAGTAGTAACAAAGCAGACAAATACATACACACAGACTATGTCAGGTGGTGTTCAGAG  3254

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3255  CTGTGAAGGAGAGTCAGAGTGAGGGAATCAAGGGTGATGGGTGCTTTTTCAGACAGGGCCTTTCTCTATTAAAC  3328

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3329  AGGCTTCCAGTGGAAGACTCTGCTAATGTTTAGCAGATAACCAAAATGCATCAGTTAGAAAAAAATATGATGAG  3402

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3403  AATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGCTCTAGAAGGGA  3476

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3477  GAGGTAGAGAATTGGAAGAAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAGCTGA  3550

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3551  AGTAGGACTGTGATTGGGAGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCTATTT  3624

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3625  ATCTGCTACCCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTGC  3698

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3699  GGTAAGAAAGATGGGATGGACACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATC  3772

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3773  TGTCCATCACTGCGACTGATGGCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCAC  3846

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3847  GTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTAGCCAACTTGACATATCATAATCCAACAGAACTCAAC  3920

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3921  CTCTACCAACTTGGAAATCATGTACATTTGTCAGGACTGTATTTAATTTCCACATAGAGAGAAAGCAAAATTAT  3994

Query 1399  ---------------------------------------------------  1398
                                                               
Sbjct 3995  ACTTTTGACCAAACTAATAGAATTATCCATTAAACAAACAAAACTGTGCCA  4045

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