Nucleotide Global Alignment
Description
- Query:
- TRCN0000476527
- Subject:
- XR_001743088.2
- Aligned Length:
- 1796
- Identities:
- 1026
- Gaps:
- 680
Alignment
Query 1 ----ATGAAGAAGAAGCAGCAGCATCCCGGCGGCGGCGCGGATCCCTGGCCCCATGGGGCCCCTATGGGGGGCG 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCGATGAAGAAGAAGCAGCAGCATCCCGGCGGCGGCGCGGATCCCTGGCCCCATGGGGCCCCTATGGGGGGCG 74
Query 71 CCCCTCCGGGCCTGGGCAGCTGGAAGCGTCGGGTGCCCCTGCTGCCTTTCCTGCGCTTCTCCCTCCGGGACTAC 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCCCTCCGGGCCTGGGCAGCTGGAAGCGTCGGGTGCCCCTGCTGCCTTTCCTGCGCTTCTCCCTCCGGGACTAC 148
Query 145 GGCTTCTGCATGGCCACCCTGCTGGTCTTCTGCCTGGGCTCCCTCCTCTATCAGCTCAGCGGGGGACCCCCTCG 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGCTTCTGCATGGCCACCCTGCTGGTCTTCTGCCTGGGCTCCCTCCTCTATCAGCTCAGCGGGGGACCCCCTCG 222
Query 219 CTTCCTGCTCGACCTGCGGCAGTACTTGGGAAATTCCACTTACTTGGATGACCATGGACCACCTCCTAGTAAGG 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTTCCTGCTCGACCTGCGGCAGTACTTGGGAAATTCCACTTACTTGGATGACCATGGACCACCTCCTAGTAAGG 296
Query 293 TACTACCTTTCCCAAGCCAGGTGGTGTACAACAGGGTAGGCAAGTGTGGGAGCCGTACTGTGGTCTTGCTTCTG 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TACTACCTTTCCCAAGCCAGGTGGTGTACAACAGGGTAGGCAAGTGTGGGAGCCGTACTGTGGTCTTGCTTCTG 370
Query 367 AGAATCTTGTCGGAGAAGCACGGATTTAATTTGGTCACATCAGACATTCACAACAAAACCAGGCTTACTAAAAA 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGAATCTTGTCGGAGAAGCACGGATTTAATTTGGTCACATCAGACATTCACAACAAAACCAGGCTTACTAAAAA 444
Query 441 TGAACAAATGGAACTGATTAAAAATATAAGTACTGCCGAACAACCCTATTTATTCACTCGACATGTTCATTTCC 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGAACAAATGGAACTGATTAAAAATATAAGTACTGCCGAACAACCCTATTTATTCACTCGACATGTTCATTTCC 518
Query 515 TCAACTTCTCAAGGTTTGGAGGAGACCAGCCTGTCTACATCAACATCATTAGAGACCCCGTCAACCGGTTCTTA 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCAACTTCTCAAGGTTTGGAGGAGACCAGCCTGTCTACATCAACATCATTAGAGACCCCGTCAACCGGTTCTTA 592
Query 589 TCCAACTATTTTTTCCGTCGCTTTGGAGACTGGAGAGGGGAACAAAATCACATGATCCGCACCCCCAGCATGAG 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCAACTATTTTTTCCGTCGCTTTGGAGACTGGAGAGGGGAACAAAATCACATGATCCGCACCCCCAGCATGAG 666
Query 663 GCAGGAGGAGCGCTACCTG-------GA------TATCAATGAG-----------------TGTATTCTTGAAA 706
||||||||||||||||||| || |||.|| ||| ||| |||.|||.|
Sbjct 667 GCAGGAGGAGCGCTACCTGTTAAGCAGATCAACCTATGAA-GAGCGAGAAGCCAAAGGAGATGT-TTCATGATA 738
Query 707 A--------------------------------------------------CTATCCCGA-----------GTG 719
| |.|||||.| |.|
Sbjct 739 AGACCCCTTTGGGCGGCTCAGCATTCAAGGCTAATAACCACTTGCTTCCTTCAATCCCAACTGGCAAGGAGGAG 812
Query 720 CTCCAACCCCAGG---------TTATTTTACATCATTCCGT-ACTTTTGTGGACAGCAT---------CCCAGA 774
|.|||| ||| ||||.|..||||.|.||.| | |||| ||| |.||||
Sbjct 813 CACCAA----AGGAGAAATTCTTTATCTGCCATCCTGCCATCA--------GACA-CATAGCCATAAACTCAGA 873
Query 775 TG-------------CAGGGAGCC----TGGTGAATGGGCCCTTGAGAGA------------------GCAAAG 813
.| |||..|||| .|||..|| ||| |.||| || |||
Sbjct 874 AGTAGTGTAAAGGACCAGAAAGCCACTACGGTAGAT--GCC----ACAGATATTAAATATCCAACATCGC-AAG 940
Query 814 CTG-------------------AACGTGAATGAAAACTT-----CCTGCTCGTGGGGATTCTTGAAGAGTTGGA 863
||| |||||| ||| ||||.|..||..|.|||.||
Sbjct 941 CTGTGCTTACAACAGGGAGAGCAACGTG--------CTTCTCTGCCTGATGCTGATGCTTCCTG---------- 996
Query 864 AGATGTGCTGCTGTTACTG--------GAAAGA---TTTTTACCTCATTACTTCAAGGGCGTG--CTCAGT-AT 923
|||| |||| ||.|| |||.|| ||...|.|||| ||| ||.|.||| .||||| ||
Sbjct 997 -GATG-GCTG----TATTGAGAATTCCGAAGGACACTTCCCATCTCA--ACT---AGAGTGTGTCATCAGTGAT 1059
Query 924 -----CTACAAAGACCCA-GAGCACAGGAAGCTTGGAAACATGA------CTG------TGACGGTGAAGAAGA 979
|||.| || ||||| .|||| |||.|..|||| ||| ||.| |
Sbjct 1060 TCATGCTAGA------CATGAGCA-TGGAA---TGGGAGAATGATGGTATCTGGCCATCTGCC----------A 1113
Query 980 CTGTCC-----------CCT--------------------CTCCTGAGGCTGTG---CAGAT------------ 1007
||.||| ||| |||||..||.|.|| |||||
Sbjct 1114 CTTTCCAATCCATTAAGCCTCACTAAAAAGTCTTGTTTGACTCCTCTGGTTCTGGCTCAGATTTTTTTACAAGG 1187
Query 1008 ------------CCTCTACCAGCGGATGAG-ATACGAG----TACGAGTT---TTACCACTACGTCAAAGAGCA 1061
|.|.|||.| |||.||| .||.||| ||..|||| ||| .||.||.||.|
Sbjct 1188 TTGGAAAAAAGCCTTTTACAA--GGAAGAGTGTATGAGGCAATAAAAGTTAACTTA-GACCACATCCA------ 1252
Query 1062 GTTCC--------------ACCTG----CTGA--AGCG----------------CAAG--TTTGG--ACTTAAG 1095
|||| ||.|| |||| |.|| |||| ||||| ||| |
Sbjct 1253 -TTCCATTTAACCCATTAAACTTGTACTCTGATTACCGTGGTCCACTTATGGGTCAAGGATTTGGGTACT---G 1322
Query 1096 TCTCA--CGTCAGCAAGCCCCCCCTGA-GGCCACACTTCTTTATCCCAACTC---CACTG---------GAAAC 1154
.|||| .||.| .||| .|.||...||||.|.|||||..|| |||.| |||||
Sbjct 1323 CCTCAATGGTGA-----------ATGACAGTCATTTTTCTCTCTCCCACTTCTAACACAGCCAGCGTAAGAAAC 1385
Query 1155 CG---------------------------------------AGGAGCCAA--------------TCGACGATGA 1175
|| .||..|||| ||.||..|||
Sbjct 1386 CGTCCTTTTCCATAATATCCATATTTTTAGCGTGTGAAGACTGGCTCCAAAAATCAATTTTAAGTCCACATTGA 1459
Query 1176 AGAACAG----------------------------GATGATGAAAAGTGGCTGGAAGAT-ATTTATAAGAGG-- 1218
|.||.|| .||| ||.|.||| ||||| |..|||||||.|
Sbjct 1460 AAAAGAGCTTTTTATATCATCGTGTTACATTGCGTCATG-TGCAGAGT------AAGATGAGCTATAAGAAGTC 1526
Query 1219 -------------------------------------------------------------------------- 1218
Sbjct 1527 CAAAGTTCCACAGTGGTATATTTTGCATAATACCGTTTGTGTTTCCATTAAATTGTATTGTTGTTTTGACTGAC 1600
Query 1219 -------------------------------------------------------------------------- 1218
Sbjct 1601 ATAGCACATTACATGTTTCTGTATTTTTCTTCCTCTCTGTTTTCTCTGTGAGTTAGCCAGAGTCACTATTTAAA 1674
Query 1219 -------------------- 1218
Sbjct 1675 AAAAAAAAAAAAAAAACTAT 1694
