Nucleotide Global Alignment

Description

Query:
TRCN0000476700
Subject:
NM_001346656.1
Aligned Length:
2870
Identities:
2480
Gaps:
115

Alignment

Query    1  ATGACCCTCCTGCTGCTGGACATTCTGCTGGCCTCTCTGCTCGCGTCCTGCTCCTGTAACAAAGCCAACAAGCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CAAGCCATGGATTGAGGCAGAGTACCAGGGCATCGTCATGGAGAATGACAACACGGTCCTACTGAATCCACCAC  148
                                                 |||||||||||||||||||||||..||||.|||||||
Sbjct    1  -------------------------------------ATGGAGAATGACAACACGGTCCTGTTGAACCCACCAC  37

Query  149  TCTTTGCCTTGGACAAGGATGCCCCGCTGCGCTATGCAGGTGAGATCTGCGGCTTCCGGCTCCATGGGTCTGGG  222
            |||||||||||||.||.|||||.||.|||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct   38  TCTTTGCCTTGGATAAAGATGCTCCACTGCGCTATGCAGGTGAGATCTGCGGCTTCCGGCTCCATGGATCTGGG  111

Query  223  GTGCCCTTTGAGGCTGTGATCCTTGACAAGGCGACAGGAGAGGGGCTGATCCGGGCCAAGGAGCCTGTGGACTG  296
            ||.|||||.||||||||||||||.||||||||.||.||.||.||||||||||||||.||||||||.||||||||
Sbjct  112  GTACCCTTCGAGGCTGTGATCCTGGACAAGGCAACGGGTGAAGGGCTGATCCGGGCTAAGGAGCCCGTGGACTG  185

Query  297  CGAGGCCCAGAAGGAACACACCTTCACCATCCAGGCCTATGACTGTGGCGAGGGCCCCGACGGGGCCAACACCA  370
            .||||||||||||||||||||.||.|||||.|||||.|||||||||||||||||.|||||.||..||||.||||
Sbjct  186  TGAGGCCCAGAAGGAACACACTTTTACCATTCAGGCTTATGACTGTGGCGAGGGACCCGATGGCACCAATACCA  259

Query  371  AGAAGTCCCACAAGGCCACTGTGCATGTGCGGGTCAACGATGTGAACGAGTTTGCCCCAGTGTTTGTGGAACGG  444
            |||||||.||||||||.||.||||||||.||||||||.||||||||.|||||||||||.||.||||||||.||.
Sbjct  260  AGAAGTCTCACAAGGCAACCGTGCATGTTCGGGTCAATGATGTGAATGAGTTTGCCCCGGTCTTTGTGGAGCGT  333

Query  445  CTGTATCGTGCGGCTGTGACAGAGGGGAAGCTGTACGATCGCATCCTGCGGGTGGAAGCCATTGACGGTGACTG  518
            |||||.|||||.||.|||||.||||||||||||||.|||||.|||.|.||.||||||||||||||.||.|||||
Sbjct  334  CTGTACCGTGCTGCAGTGACGGAGGGGAAGCTGTATGATCGGATCTTACGTGTGGAAGCCATTGATGGCGACTG  407

Query  519  CTCCCCCCAGTACAGCCAGATCTGCTACTATGAGATTCTCACACCCAACACCCCTTTCCTCATTGACAATGACG  592
            ||||||.|||||||||||||||||||||||||||||.||.||.|||||||||||||||||||||||||||||.|
Sbjct  408  CTCCCCGCAGTACAGCCAGATCTGCTACTATGAGATCCTTACGCCCAACACCCCTTTCCTCATTGACAATGATG  481

Query  593  GGAACATTGAGAACACAGAGAAGCTGCAGTACAGTGGTGAGAGGCTCTATAAGTTTACAGTGACAGCTTATGAC  666
            |.|||||||||||||||||||||||.|||||||||||.||||..|||||.|||||.|||||||||||.||||||
Sbjct  482  GCAACATTGAGAACACAGAGAAGCTACAGTACAGTGGCGAGAAACTCTACAAGTTCACAGTGACAGCGTATGAC  555

Query  667  TGTGGGAAGAAGCGGGCAGCAGATGATGCTGAGGTGGAGATTCAGGTGAAGCCCACCTGTAAACCCAGCTGGCA  740
            ||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  556  TGTGGGAAGAAGCGAGCGGCAGATGATGCTGAGGTGGAGATTCAGGTGAAGCCCACCTGCAAACCCAGCTGGCA  629

Query  741  AGGCTGGAACAAAAGGATCGAATATGCACCAGGTGCTGGGAGCTTGGCTTTGTTCCCTGGTATCCGCCTGGAGA  814
            ||||||||||||||||||.||||||||.|||||.||.|||||||||||||||||||||||.|||||.|||||||
Sbjct  630  AGGCTGGAACAAAAGGATTGAATATGCCCCAGGAGCCGGGAGCTTGGCTTTGTTCCCTGGCATCCGTCTGGAGA  703

Query  815  CCTGTGATGAACCACTCTGGAACATTCAGGCCACCATAGAGCTGCAGACCAGCCATGTGGCCAAGGGCTGTGAC  888
            ||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  704  CCTGTGATGAGCCACTGTGGAACATTCAGGCCACCATAGAGCTGCAGACCAGCCATGTGGCCAAGGGCTGCGAC  777

Query  889  CGTGACAACTACTCAGAGCGGGCGCTGCGGAAACTCTGTGGTGCTGCCACTGGGGAGGTGGATCTGTTGCCCAT  962
            ||.||||||||.||||||.||||.||||||||.||||||||||||||.||||||||||||||.|||||||||||
Sbjct  778  CGAGACAACTATTCAGAGAGGGCTCTGCGGAAGCTCTGTGGTGCTGCTACTGGGGAGGTGGACCTGTTGCCCAT  851

Query  963  GCCTGGCCCCAATGCCAACTGGACAGCAGGACTCTCGGTGCACTACAGCCAGGACAGCAGCCTGATCTACTGGT  1036
            |||.|||||||||||||||||||||||.||.||.|||||||||||||||||||||||||||||.||||||||||
Sbjct  852  GCCCGGCCCCAATGCCAACTGGACAGCGGGGCTGTCGGTGCACTACAGCCAGGACAGCAGCCTCATCTACTGGT  925

Query 1037  TCAATGGCACCCAGGCTGTGCAGGTGCCCCTGGGTGGCCC--CAGTGGGCTGGGCTCTGGGCCCCAGGACAGCC  1108
            ||||||||||.||.||||||||.||.|||||||||||.||  ||  |||||||||||||||||.|||||..||.
Sbjct  926  TCAATGGCACACAAGCTGTGCAAGTTCCCCTGGGTGGTCCAGCA--GGGCTGGGCTCTGGGCCGCAGGATGGCT  997

Query 1109  TCAGTGACCACTTCACCCTGTCCTTCTGGATGAAGCATGGCGTAACTCCCAACAAGGGCAAGAAGGAAGAGGAA  1182
            ||||.||||||||.||||||||||||||||||||||||.|.||.|||||||.||||||.||||||||.|||||.
Sbjct  998  TCAGCGACCACTTTACCCTGTCCTTCTGGATGAAGCATAGTGTGACTCCCAGCAAGGGGAAGAAGGAGGAGGAG  1071

Query 1183  ACCATCGTATGTAACACTGTCCAGAATGAGGACGGCTTCTCTCACTACTCGCTGACTGTCCACGGCTGTAGGAT  1256
            |||||.||.||||||||.|||||||||||||||||||.||||||||||||.|||||||||||.|||||.||.||
Sbjct 1072  ACCATTGTGTGTAACACAGTCCAGAATGAGGACGGCTACTCTCACTACTCACTGACTGTCCATGGCTGCAGAAT  1145

Query 1257  TGCCTTCCTCTACTGGCCCCTGCTTGAGAGTGCCCGCCCAGTCAAGTTCCTCTGGAAGCTGGAGCAGGTCTGTG  1330
            ||||||.|||||||||||..|||||||||||||.||.||.|||||||||||||||||||||||||||||.||||
Sbjct 1146  TGCCTTTCTCTACTGGCCGTTGCTTGAGAGTGCTCGTCCTGTCAAGTTCCTCTGGAAGCTGGAGCAGGTGTGTG  1219

Query 1331  ATGATGAGTGGCACCACTACGCTCTGAACCTCGAGTTCCCCACAGTCACACTCTATACCGACGGCATCTCCTTC  1404
            |||||||.|||||.||||||||.||||||||.|||||||||||.||||||||.|||||.|||||.|||||||||
Sbjct 1220  ATGATGAATGGCATCACTACGCCCTGAACCTGGAGTTCCCCACGGTCACACTGTATACTGACGGTATCTCCTTC  1293

Query 1405  GACCCTGCCCTCATCCATGACAATGGCCTCATCCACCCACCCCGAAGGGAGCCTGCTCTCATGATTGGGGCCTG  1478
            |||||.||.||||||||.||||||||.|||||||||||||||.|.|||||.|||||.|||||||||||||||||
Sbjct 1294  GACCCGGCTCTCATCCACGACAATGGTCTCATCCACCCACCCAGGAGGGAACCTGCACTCATGATTGGGGCCTG  1367

Query 1479  CTGGACTGAGGAGAAGAACAAAGAGAAGGAAAAGGGAGACAACAGTACAGACACCACCCAAGGAGACCCTTTGT  1552
            |||||||||.||||||||||||||||||.|...||||||.||||||||||||||..||..|||||||||.|||.
Sbjct 1368  CTGGACTGAAGAGAAGAACAAAGAGAAGAAGGGGGGAGAGAACAGTACAGACACAGCCTCAGGAGACCCCTTGC  1441

Query 1553  CGATCCACCACTACTTCCATGGCTACCTGGCTGGTTTCAGCGTGCGCTCAGGTCGCCTGGAGAGCCGCGAGGTC  1626
            .|||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1442  TGATCCACCACTACTTTCATGGCTACCTAGCTGGTTTCAGCGTGCGCTCAGGTCGCCTGGAGAGCCGTGAGGTC  1515

Query 1627  ATCGAGTGCCTCTATGCATGTCGGGAGGGGCTGGACTATAGGGATTTCGAGAGCCTGGGCAAAGGCATGAAGGT  1700
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1516  ATCGAGTGCCTCTATGCATGTCGGGAGGGGCTGGACTATAGGGATTTCGAGAGCCTGGGCAAAGGCATGAAGGT  1589

Query 1701  CCACGTGAACCCCTCACAGTCCCTGCTCACCCTGGAGGGGGATGATGTGGAGACCTTCAACCATGCCCTGCAGC  1774
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1590  CCACGTGAACCCCTCGCAGTCCCTGCTCACCCTGGAGGGGGATGATGTGGAGACCTTCAACCATGCCCTGCAGC  1663

Query 1775  ATGTGGCTTACATGAACACTCTGCGCTTTGCCACGCCCGGCGTCAGGCCCCTGCGCCTCACCACTGCTGTCAAG  1848
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||
Sbjct 1664  ATGTGGCTTACATGAACACTCTGCGCTTTGCCACACCCGGCGTCAGGCCCCTGCGCCTCACCACCGCTGTCAAG  1737

Query 1849  TGCTTCAGCGAAGAGTCCTGCGTCTCCATCCCTGAAGTGGAGGGCTACGTGGTCGTCCTTCAGCCTGACGCCCC  1922
            |||||.||.|||||||||||.||||||||||||||||||||||||||.|||||.||.||||||||.||||||||
Sbjct 1738  TGCTTTAGTGAAGAGTCCTGTGTCTCCATCCCTGAAGTGGAGGGCTATGTGGTGGTTCTTCAGCCCGACGCCCC  1811

Query 1923  CCAGATCCTGCTGAGTGGCACTGCTCATTTTGCCCGCCCAGCTGTGGACTTTGAGGGAACCAACGGCGTCCCTT  1996
            |||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||.||.|.||.|||||.|
Sbjct 1812  CCAGATCCTTCTGAGTGGCACAGCTCATTTTGCCCGCCCAGCTGTGGACTTTGAGGGACCCGAGGGAGTCCCCT  1885

Query 1997  TGTTCCCTGATCTTCAAATCACCTGCTCCATTTCTCACCAGGTGGAGGCCAAAAAGGATGAGAGTTGGCAGGGC  2070
            |||||||.||||||||.||||||||||||||||||||||||||||||||||||...||||||||||||||||||
Sbjct 1886  TGTTCCCCGATCTTCAGATCACCTGCTCCATTTCTCACCAGGTGGAGGCCAAAGCAGATGAGAGTTGGCAGGGC  1959

Query 2071  ACAGTGACAGACACACGCATGTCGGATGAGATTGTGCACAACCTGGATGGCTGTGAAATTTCTCTGGTGGGGGA  2144
            |||||||||||||||||||||||.|||||||||||.||||||.||||.||||||||.|||||||||||||||||
Sbjct 1960  ACAGTGACAGACACACGCATGTCAGATGAGATTGTACACAACTTGGACGGCTGTGAGATTTCTCTGGTGGGGGA  2033

Query 2145  TGACCTGGATCCCGAGCGGGAAATCCTGCTGCTGGACACAACCTCTCTGCAGCAGCGGGGGCTGGAGCTCACCA  2218
            ||||||.||.||.||.||.||.|.||||||..||||||...|.||.|||||||||||.||.|||||.|||||||
Sbjct 2034  TGACCTAGACCCTGAACGAGAGAGCCTGCTCTTGGACATGGCTTCCCTGCAGCAGCGAGGCCTGGAACTCACCA  2107

Query 2219  ACACATCTGCCTACCTCACTATTGCTGGGGTGGAGAGCATCACTGTGTATGAAGAGATCCTGAGGCAGGCTCGT  2292
            |||||||||||||||||||.||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 2108  ACACATCTGCCTACCTCACCATTGCTGGGGTGGAGACCATCACTGTGTATGAAGAGATCCTGAGGCAGGCTCGT  2181

Query 2293  TATCGGCTGCGACACGGAGCTGCCCTCTACACCAGGAAGTTCCGGCTTTCCTGCTCGGAAATGAATGGCCGTTA  2366
            ||||.|||.||.||.|||||||||||.||..|||||||.|||||||||||.||||||||.|||||.|||||.||
Sbjct 2182  TATCAGCTTCGGCATGGAGCTGCCCTTTATGCCAGGAAATTCCGGCTTTCTTGCTCGGAGATGAACGGCCGATA  2255

Query 2367  CTCCAGCAATGAATTCATCGTGGAGGTCAATGTCCTGCACAGCATGAACCGGGTTGCCCACCCCAGCCACGTGC  2440
            |||||||||.||||||||.|||||||||||.||||||||.||||||||||||||.|||||.|||||.||.||||
Sbjct 2256  CTCCAGCAACGAATTCATTGTGGAGGTCAACGTCCTGCATAGCATGAACCGGGTGGCCCATCCCAGTCATGTGC  2329

Query 2441  TCAGCTCCCAGCAGTTCCTGCACCGTGGTCACCAGCCCCCGCCTGAGATGGCTGGACACAGCCTAGCCAGCTCC  2514
            ||||.||.|||||||||||||||||.|||||||||||.||.|||||||||||||||||||||||.|||||||||
Sbjct 2330  TCAGTTCACAGCAGTTCCTGCACCGGGGTCACCAGCCTCCTCCTGAGATGGCTGGACACAGCCTGGCCAGCTCC  2403

Query 2515  CACAGAAACTCCATGATACCCAGCGCCGCAACCCTCATCATTGTGGTGTGCGTGGGCTTCCTGGTGCTCATGGT  2588
            |||.|.|||||||||.|.|||||.||.||.||.||||||||||||||.|||||||||||.||||||||.|||||
Sbjct 2404  CACCGGAACTCCATGGTCCCCAGTGCTGCGACTCTCATCATTGTGGTATGCGTGGGCTTTCTGGTGCTTATGGT  2477

Query 2589  CGTCCTGGGCCTGGTGCGCATCCATTCCCTTCACCGCCGCGTCTCAGGGGCCGGCGGGCCTCCAGGGGCCTCCA  2662
            ..||||.|||||.||.||.|||||.||||||||.||||||||||||||..|.|||||.|||.|||||||.||||
Sbjct 2478  TATCCTCGGCCTCGTTCGGATCCACTCCCTTCATCGCCGCGTCTCAGGAACTGGCGGACCTTCAGGGGCTTCCA  2551

Query 2663  GTGACCCCAAGGACCCAGACCTCTTCTGGGATGACTCAGCTCTCACCATCATTGTGAACCCCATGGAGTCCTAC  2736
            .||||||.||||||||.||||||||||||||||||||.|||||||||||.|||||.||.||.||||||||||||
Sbjct 2552  CTGACCCGAAGGACCCTGACCTCTTCTGGGATGACTCTGCTCTCACCATTATTGTCAATCCTATGGAGTCCTAC  2625

Query 2737  CAGAATCGGCAGTCCTGTGTGACGGGGGCTGTTGGGGGCCAGCAGGAGGATGAGGACAGCAGTGACTCGGAGGT  2810
            |||||.|.||||.||||||||.|.||||..|.|||.||||||||.|||||.||||||||||||||||||||.|.
Sbjct 2626  CAGAACCAGCAGACCTGTGTGGCAGGGGTGGCTGGTGGCCAGCAAGAGGAAGAGGACAGCAGTGACTCGGAAGC  2699

Query 2811  GGCCGATTCCCCCAGCAGCGACGAGAGACGCATCATCGAGACCCCCCCACACCGCTAC  2868
            .|||||.|||||||||||.||.||||||||||||||.||||.|||||||||||||||.
Sbjct 2700  AGCCGACTCCCCCAGCAGTGATGAGAGACGCATCATTGAGAGCCCCCCACACCGCTAT  2757

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