Nucleotide Global Alignment

Description

Query:
TRCN0000476716
Subject:
XR_926295.3
Aligned Length:
5714
Identities:
1033
Gaps:
4676

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTCCTATGTAGCCCAGGCTGGTCTTGAACTCCTGGGCTCAAGTGATCCACCCAACTTGGTCTCCCAAAGTGCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGATTATAGGCGTGATCCACTGTGCCTGGCCCTGTCATTTCTTTTCTCAGAGAGGATAACAATTTATTTGTCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACAGAAAGTTTTAAATGTTGAAGGAGATTGGCCTGGAAATATGCTTTTGGGGAGCAACACGGTCTGAGCCAGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATCCAGATACAGCCCATTCTTCTGGCCAGTCTTGCCCTTTGCTCCTGATTCTCCAAGCTGTACCCAGAGCTTTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGTTCAGCATGTACCTGGAGGCTGCTTTTGACCATGTTTTGAGAGTGGCATGGCTTTATCTAATGGGATGAAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTGGCTAAAGAGATTAGCAAAATGTCTTGTGGATCCCACTTTTAATCTGCAGCGTTCAGGCTGCCCCTTCTTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTGGGAAGGGCGCTGAAGAAACAACGCCCAGGACCAGGACTATCCCCTGCTCAAGCTGTGATTCCGAGACCCCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCACCACTACTGCATTCACGGGGATCCCAGGCTAGTGGGACTCGACATGGGTAGCCCCCAGGGCAGCTCCCTA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAGCTTGGGCCATCTGCACTTTTCCCAAGGCCCTAAGTCTCCGCCTCTGGGCTCGTTAAGGTTTGGGGTGGGAG  666

Query    1  ---------------------------------------ATGGCGCTACTGAAAGTCAAGTTTGACCAGAAGAA  35
                                                   |||||||||||||||||||||||||||||||||||
Sbjct  667  CTGTGCTGTGGGAAGCAACCCGGACTACACTTGGCAAGCATGGCGCTACTGAAAGTCAAGTTTGACCAGAAGAA  740

Query   36  GCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCATGAACTGGTTCTCCGTGTTGGCTGGCATCATCATCTTCAGCC  109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCATGAACTGGTTCTCCGTGTTGGCTGGCATCATCATCTTCAGCC  814

Query  110  TAGGACTGTTCCTGAAGATTGGACTCCGAAAGAGGAGCGATGTGATGAATAATTCTGAGAGCCATTTTGTGCCC  183
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAGGACTGTTCCTGAAGATTGAACTCCGAAAGAGGAGCGATGTGATGAATAATTCTGAGAGCCATTTTGTGCCC  888

Query  184  AACTCATTGATAGGGATGGGGGTGCTATCCTGTGTCTTCAACTCGCTGGCTGGGAAGATCTGCTACGACGCCCT  257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AACTCATTGATAGGGATGGGGGTGCTATCCTGTGTCTTCAACTCGCTGGCTGGGAAGATCTGCTACGACGCCCT  962

Query  258  GGACCCAGCCAAGTATGCCAGATGGAAGCCCTGGCTGAAGCCGTACCTGGCTATCTGTGTCCTCTTCAACATCA  331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  963  GGACCCAGCCAAGTATGCCAGATGGAAGCCCTGGCTGAAGCCGTACCTGGCTATCTGTGTTCTCTTCAACATCA  1036

Query  332  TCCTCTTCCTTGTGGCTCTCTGCTGCTTTCTGCTTCGGGGCTCGCTGGAGAACACCCTGGGCCAAGGGCTCAAG  405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCCTCTTCCTTGTGGCTCTCTGCTGCTTTCTGCTTCGGGGCTCGCTGGAGAACACCCTGGGCCAAGGGCTCAAG  1110

Query  406  AACGGCATGAAGTACTACCGGGACACAGACACCCCTGGCAGGTGTTTCATGAAGAAGACCATCGACATGCTGCA  479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AACGGCATGAAGTACTACCGGGACACAGACACCCCTGGCAGGTGTTTCATGAAGAAGACCATCGACATGCTGCA  1184

Query  480  GATCGAGTTCAAATGCTGCGGCAACAACGGTTTTCGGGACTGGTTTGAGATTCAGTGGATCAGCAATCGCTACC  553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GATCGAGTTCAAATGCTGCGGCAACAACGGTTTTCGGGACTGGTTTGAGATTCAGTGGATCAGCAATCGCTACC  1258

Query  554  TGGACTTTTCCTCCAAAGAAGTCAAAGA----------------------------------------------  581
            ||||||||||||||||||||||||||||                                              
Sbjct 1259  TGGACTTTTCCTCCAAAGAAGTCAAAGAGTTGCAGGATGAGCAGAGCTGCAGTGTCTTGGGGTGAGAGGTAGAA  1332

Query  582  --------------------------------------------------------------------------  581
                                                                                      
Sbjct 1333  CATGCGGGAGCTCAGACATTTTGGAACCAGGAACTACCAGCCAGGAAGGCCCAGCCTGGGGTCCCCAGTCTGAG  1406

Query  582  --------------------------------------------------------------TCGAATCAAGAG  593
                                                                          ||||||||||||
Sbjct 1407  GGAGAAGCTGGCACCAAGCTCTTGCTCTTCACCATTCTTCCCAGGGAACCCACAGACTACAGTCGAATCAAGAG  1480

Query  594  CAACGTGGATGGGCGGTACCTGGTGGACGGCGTCCCTTTCAGCTGCTGCAATCCTAGCTCGCCACGGCCCTGCA  667
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CAACGTGGATGGGCGGTACCTGGTGGACGGCGTCCCTTTCAGCTGCTGCAATCCTAGCTCGCCACGGCCCTGCA  1554

Query  668  TCCAGTATCAGATCACCAACAACTCAGCACACTACAGTTACGACCACCAGACGGAGGAGCTCAACCTGTGGGTG  741
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCCAGTATCAGATCACCAACAACTCAGCACACTACAGTTACGACCACCAGACGGAGGAGCTCAACCTGTGGGTG  1628

Query  742  CGTGGCTGCAGGGCTGCCCTGCTGAGCTACTACAGCAGCCTCATGAACTCCATGGGTGTCGTCACGCTCCTCAT  815
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CGTGGCTGCAGGGCTGCCCTGCTGAGCTACTACAGCAGCCTCATGAACTCCATGGGTGTCGTCACGCTCCTCAT  1702

Query  816  TTGGCTCTTCGAGGTGACCATTACAATTGGGCTGCGCTACCTACAGACGTCGCTGGATGGTGTGTCCAACCCCG  889
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TTGGCTCTTCGAGGTGACCATTACAATTGGGCTGCGCTACCTACAGACGTCGCTGGATGGTGTGTCCAACCCCG  1776

Query  890  AGGAATCTGAGAGCGAGAGCGAGGGCTGGCTGCTGGAGAAGAGCGTGCCGGAGACCTGGAAGGCCTTTCTGGAG  963
            ||||||||||||||||||||.||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1777  AGGAATCTGAGAGCGAGAGCCAGGGCTGGCTGCTGGAGAGGAGCGTGCCGGAGACCTGGAAGGCCTTTCTGGAG  1850

Query  964  AGTGTGAAGAAGCTGGGCAAGGGCAACCAGGTGGAAGCCGAGGGCGCAGGCGCAGGCCAGGCCCCAGAGGCTGG  1037
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1851  AGTGTGAAGAAGCTGGGCAAGGGCAACCAGGTGGAAGCCGAGGGCGCAGACGCAGGCCAGGCCCCAGAGGCTGG  1924

Query 1038  C-------------------------------------------------------------------------  1038
            |                                                                         
Sbjct 1925  CTGAGGGCCCTGGGGCCCCTCCCCTCCCGAACACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCCCTC  1998

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 1999  ATCCAACTCCGAAAGTCTGAATCTCCCAAGGAGGGCACCATCTTACAGAGACTCTCCCTGACGGTGGAATTTAA  2072

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2073  GTTTAGGGTCCCTAAAAGCATTTGACACACAGTTGTTGAATGACTGACCCAAAATGTGAATGAAGCTAATGTGA  2146

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2147  ATGTGAGTGAAGCTCCCTTCAGGCCCGCTGCCCTAGGATATGCCCTCCTGGTGACTCGGGGGCTGTCTCAGACG  2220

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2221  ACTAGCCCAGGACCCATCTTTCTCACACGGATTTAGTCCCACCCTATGGCCACTGGCCGTATCTGAGGGCTGCT  2294

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2295  CCCCTTTTAGAATTTACCTCTTATGAGCTCCATGTTGCTTCACTCTATCCAAAGTGTCACTTGGTGCATAAGCA  2368

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2369  CAGAAATCTGAAAAATGGCCATGTTGTCTTTTTTTTTTTTTTTTAATGCCAAGATTGACAGGTTGGCCGTTTGC  2442

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2443  TTAATGCCAGAAGTTGGGGGAAAGTTACGCTTTTCTAAGAATAATGGACTCTTAAGGCATTGAGGGCTCTAAAC  2516

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2517  AGGATTCTTTAATCATGGAGCAAGAGAATTTCAAGGCAGGGGATTTTATCCCCCACCAAAAACACAGTGAAAGG  2590

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2591  CCTGCTTTTGTGTCCCATTCACATGCCCTCGGTCACTGAGTCTGGAGTGAACCACGGGTTGAGGAAGTCAGGCT  2664

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2665  GTTGGCGTGTCCCAGCACCACACCACCCCTAAAGTGCCAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGG  2738

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2739  GGTAGGCTGCTGCCCTGCTGTGGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAG  2812

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2813  CTCTTGGTGGGCCCAGGGACACCCACACAGGTGGCCATCACAGCCCCATGGACAACACTAATTGTCCACAGCAA  2886

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2887  AGGGCAAGGAATCCTCTGGGAGCTTCTTCCGTTTCTTCCCCCCAGATACCCATCTTGAAAAACACTATTTCTGG  2960

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 2961  AATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTTCCTGAGCTAGCAAATACAGGAGTTTTCACTT  3034

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3035  TCTTTAGGAAAGAGAAGCTTTCAGGGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACC  3108

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3109  AAGGCAGGGCCCAGCATAATTCCTCCAGTTGGATGAACATTCAAGAGAGCTCGTTCCTACCTGGCTGGAGACCG  3182

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3183  AGGCCAGAAGGCAAAAACCAGAAAGGGAACAGTCCATAACTTACCTCTGCTTCTGACCGATGGTGTTTGGGAAT  3256

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3257  AGGTTACTTTGGACTGAGTTTGGGTTCTCTGCTGTCCTAAGAACTTCAGTGTAGAGAAAATAAGACTTCTGGTG  3330

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3331  CTGCTGGGGTATGTTCTGGGCTTAATTCCCCCAAGCAGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAGA  3404

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3405  CGTTGGTCCCAAGTTTAATTAGATTTCTGAATCTCGTTGAGGCCAAGGAATGATCCATACTGAAAAAATGCTGA  3478

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3479  GCCAGCCATCTTTGGCAAAGGTCCCTGAGCTCTTGCTATCTCTCAAGAGTGCTGAGAACCACGGTGAAAGTGCT  3552

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3553  GCTCTAGGCCCACAAGTGTAACTATGCTGTTAACAGCTGTCAATAGATAATTAAAATTCATACTGTATGAAAAT  3626

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3627  CACTTTTGTTAAATGACTGTTTAAGCCCATTCAACAACATATATCAGAATCCCCTACTACCGCTAGTATTTGCC  3700

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3701  AAAAAAGAAAAGAAACCCACCCTAAGGGAAGCATTGGTAACAATCGTTGTTATAAACATGGCTTGGGTATCACA  3774

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3775  TCTCTCCATCTTGCCATCTCTTACCTGTAAGAACGGTGACTATTACAACAGTGACTATTATTATATCCAAATAA  3848

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3849  TCTCAGCATTTGCTGGAGTTTGAACCAGAGCTGAATACATGGAATTTTAATGTAGAAATTTAGGCAAAACTCCA  3922

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3923  AGCCATTTTTTCTTCTCCTCTGGCCAAAACGTTATTTCCTCAAACAGGGAAATATGAGTCTCTATGGGGCCAGG  3996

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 3997  TTATAGGAGCAAATGTGAACAACCTGAGAATCTGAAGGTTGTTGAGAGGACCAAGAGTGCATTGACTCTACAAT  4070

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4071  AAATCTCACTCATTGGTTCGGAGCAGGCTTAGGGTTAACTGCATTTTAACAGGTCTTCTCAGGTAGCCGGTAGT  4144

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4145  TGCGAGAGAAACCTGGACCATCCCTTTTGGTCACCTACCAGTGCCCAGGAAGTCTCTGCTATCAGGTTTTTGCT  4218

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4219  TGTGTGTAACTTCAGTCTTTCCTTGGGCTGGTGTAAATCCTTTTCTCCTGAGGGACCCAGCCTACTTTTTTTTT  4292

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4293  TTTTTTTTCAAATATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCATGATCTCAGCTCACTGCAA  4366

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4367  CCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCTACTAGCTGGGATTACAGGCGTTTGCCACC  4440

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4441  ACGCCCGGCTAATTTTTGTATTTTTATTAGAGATGAGATTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTG  4514

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4515  TCCTTAGGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACCTGGCCCAGCTAGC  4588

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4589  TTTTAAAGTTCTGCCAGCATAGCCCCGGGATGGGGTGGGGGTAGACAGGGCCTTAGGACTTTCATTTTTAAAAT  4662

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4663  GCTCACTCCACGGTGAAGAAACAGGTGATGACTATCCTGAATATTTGGGAAGCTGTGTCCTAGAATTTTTGGCC  4736

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4737  TCAGTTCCAGAACCCACAGCTTCTTTACAACATGCTTCAAGCCTGGGACTGAGCTGCCAGTAAATAAACCCCTA  4810

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4811  GTAACCTTAATATGGGTTAATAAGATTAGGTGCCCGCTCTGCACGCTCCCCTGCCCCTCCTCGTCCGGGCACCT  4884

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4885  GTTACACTAGGCCAGCATGTTTGCAGCTTAGCCAGGGAAAATCGTGGACCAAGACAGGGCTTTTCATCCACGAC  4958

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 4959  TGGCTAAAAAGATGGCTCTCAATGACAGCGCAGGCAGGCAGCACCACTGTGTTAGGAAGAGAAAAGTGTCTGTC  5032

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 5033  CAATACTATGAAAGTCCAGGGAAGAGACAAGTGCCTTCCCAGGTCACAATGGATAGATTGGCTGGAAGGGGAAA  5106

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 5107  AACATGTCAGTTCTTAACTCCTGACAGCATTTTATCCTGTCCATCACAGAGGACTGTAAACAGCAAAGTTACAG  5180

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 5181  ATTAGAGAATGCTGAGCTCTCAGGATGGCATCAAATGGAGGATTAAGATGTAAGGGACAACTTCTAGCTATTTA  5254

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 5255  CCTGAGGGAAGTGAAAATTCAGGTTTGTACAAAAACCCATCCATGAATGTTTGTAGCAGTAATCACCAAAACAA  5328

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 5329  TCACCCAAACTCACCCAAATGCCCTTCATCTGGCAACTGCCCAGAAGTCTGTACAACGGAATGCTACTCAGCAA  5402

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 5403  TCCAAAGGAACAGGGAGGACCCGAATGCATTCTTCTTTAGTGAGAAGCCAGACTCAAAATGCTACATATGATAC  5476

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 5477  AATTCCATTTATATAACATTCGGGAAGAGACAAAACAAAGGGAGAGAAAAACACTGGTAGCTGAAAGCCAGGAT  5550

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 5551  GAGGCAAGAAGCTGACTACAAAGGGGACTTTTGGGGAAGATGGAATTGTTCTATTTCTCGATTGTGGTTGTTTA  5624

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 5625  ACTGTATGCATTTGTTAAAATGTATAAAACTGTACACTAAAAAGAGTTAATCTGTTTGTAAAATATACCTCAAT  5698

Query 1039  ----------------  1038
                            
Sbjct 5699  AAATGTGACTTAAAAA  5714

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