Nucleotide Global Alignment

Description

• Query: TRCN0000476797
• Subject: NM_001081443.3
• Aligned Length: 1965
• Identities: 1232
• Gaps: 564

Alignment

Query    1  ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCC  74
            |||||.|.|.|||||.|||.||||.|.|||||.|||||||||.||||||||||||||.|||||||||||||..|
Sbjct    1  ATGACCCTCACCCTCTCAGTCCTGATTTGCCTCGGGCTGAGTGTGGGCCCCAGGACCTGCGTGCAGGCAGGCAC  74

Query   75  CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCT-GGGGGAGCCCCGTGACCATCTGGTGT  147
            |.||||||||||||||||||||||||||||||.||||||||| |||| ||||||..|||||||||.||||||||
Sbjct   75  CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGCCTCTGTGAT-AGCTCGGGGGAAGCCCGTGACCCTCTGGTGT  147

Query  148  CAGGGGAGCCTGGAGGCCCAGGAGTACCGACTGGATAAAGAGGGAAGCCCA-GAGCCCTTGG-ACAGAAATAAC  219
            ||||||..|||||||.|..||||||||||.||||||||.||||||..|||| |.||||  || |.|||.|.|||
Sbjct  148  CAGGGGCCCCTGGAGACTGAGGAGTACCGTCTGGATAAGGAGGGACTCCCATGGGCCC--GGAAGAGACAGAAC  219

Query  220  CCACTGGAACCCAAGAA--CAAGGCCAGATTCTCCATCCCATCC-------ATGACAGAGCACCATGCGGGGAG  284
            ||||||||.||  .|.|  ||||||||..|||..|||.||||||       |||||||       |||.|||.|
Sbjct  220  CCACTGGAGCC--TGGAGCCAAGGCCAAGTTCCACATTCCATCCACGGTGTATGACAG-------TGCAGGGCG  284

Query  285  ATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGGAT  358
            ||||||||||.|||||.|.|.|.||||||||||||||||||||||.||||||||||||||||||..||      
Sbjct  285  ATACCGCTGCTACTATGAGACCCCTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGCGA------  352

Query  359  TCTACAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCGATGT  432
                                                                                      
Sbjct  353  --------------------------------------------------------------------------  352

Query  433  GGCTCACAGAAGGGATATCACCATTTTGTTCTGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCCTGGACTC  506
                                                                                      
Sbjct  353  --------------------------------------------------------------------------  352

Query  507  ACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGAACCCCAGCCACAGGTGGAGGT  580
                                                                                      
Sbjct  353  --------------------------------------------------------------------------  352

Query  581  TCACATGCTATTACTATTATATGAACACCCCCCAGGTGTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGCCC  654
                                                                                      
Sbjct  353  --------------------------------------------------------------------------  352

Query  655  TCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTGGGCAG--AGCCTGACC  726
             ||||||||||||||||||||||||||||||.||.|||||||.|||||.||||||  |.|.||  |||||||||
Sbjct  353  -CAGGCGTGTCTAGGAAGCCCTCCCTCCTGATCCCGCAGGGCTCTGTCGTGGCCC--GCGGAGGCAGCCTGACC  423

Query  727  CTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTCCTCCAGCG  800
            ||.||||||.||||||||||||||||.||||.|||.||||||||.|||||||||||||.||||.||.|||||.|
Sbjct  424  CTGCAGTGTCGCTCTGATGTCGGCTATGACATATTCGTTCTGTACAAGGAGGGGGAACATGACCTCGTCCAGGG  497

Query  801  CCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCCACGGGG  874
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  498  CTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCCACGGGG  571

Query  875  GCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGA-GTGGTCGGCCCCCAGCGACCCCCTGAACATCCT  947
            ||||||||||.|||||.|||||||||||||||||| ||.| |||||||||||||||||||||||||.|||||||
Sbjct  572  GCCAGTACAGATGCTACGGTGCACACAACCTCTCC-CCTAGGTGGTCGGCCCCCAGCGACCCCCTGGACATCCT  644

Query  948  GATGGCAGGACAGATCTATGACA---CCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAGGAGAGA  1018
            |||.|||||||.||||..|||||   |||   ||||.||.|..|||||||||||||..||||||||||||||||
Sbjct  645  GATCGCAGGACTGATCCCTGACATACCCG---CCCTCTCGGTGCAGCCGGGCCCCAAGGTGGCCTCAGGAGAGA  715

Query 1019  ACGTGACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGCCCATCCC  1092
            ||||||||||||||||||||||||||...|||.|.|||||||||.||.|||||||.||.|||||||||||||||
Sbjct  716  ACGTGACCCTGCTGTGTCAGTCATGGCATCAGATAGACACTTTCTTTTTGACCAAGGAGGGGGCAGCCCATCCC  789

Query 1093  CCACTGCGTCTGAGATCAATGTACGGAG-CTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAG  1165
            ||.|||.||||.|..||||.|||| .|| ||.|||...||||||||||||||.|||||||||||||||||||||
Sbjct  790  CCGCTGTGTCTAAAGTCAAAGTAC-CAGTCTTATAGACACCAGGCTGAATTCTCCATGAGTCCTGTGACCTCAG  862

Query 1166  CCCACGCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAACCCCCACCTGCTGTCTTTCCCCAGTGAGCCC  1239
            ||||.|..||.||||||.|.||||||.||.||..|||.|||.|||||.||||||||||...|||.|||.|.|||
Sbjct  863  CCCAGGGTGGAACCTACCGATGCTACAGCGCAATCAGGTCCTACCCCTACCTGCTGTCCAGCCCTAGTTACCCC  936

Query 1240  CTGGAACTCATGGTCTCAGGACACTCTGGAGGCT-CCAGCCTCCCACCCACAGG-GCCGCCCTCCACACC----  1307
            |.|||.|||.||||||||||||.|||||| ||.| ||||||||.||||.||||| .||.||| |||||||    
Sbjct  937  CAGGAGCTCGTGGTCTCAGGACCCTCTGG-GGATCCCAGCCTCTCACCTACAGGCTCCACCC-CCACACCTGCA  1008

Query 1308  -----------------------------------------------TGGTCTGGGAAGATACCTGGAGGTTTT  1334
                                                           ||||||||||||..||||||.||||.|
Sbjct 1009  GGCCCTGAGGACCAGCCCCTCACCCCCACGGGGTTGGATCCCCAGAGTGGTCTGGGAAGGCACCTGGGGGTTGT  1082

Query 1335  GATTGGGGTCTCGGTGGCCTTCGTCCTGCTGCTCTTCCTCCTCCTCTTCCTCCTCCTCCGACGTCAGCGTCACA  1408
            ||.|||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||.||.||.|||.|
Sbjct 1083  GACTGGGGTCTCAGTGGCCTTCGTCCTGCTGCTGTTCCTCCTCCTCTTCCTCCTCCTCCGACATCGGCATCAGA  1156

Query 1409  GCAAACACAGGACATCTGACCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACAGAGCCCAAG  1482
            ||||||||||||||||.|.||            |||||.|.|||||||||||||||||||.|.|||||||||||
Sbjct 1157  GCAAACACAGGACATCGGCCC------------ATTTCTACCGTCCTGCAGGGGCTGCGGGGCCAGAGCCCAAG  1218

Query 1483  GACAGGGGCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCTATGCTGCCGTGAAGGA  1556
            |||..||||||||.||.||||.|||||||||.|||||||.|||||||.||||..|||.||||||||||||||||
Sbjct 1219  GACCAGGGCCTGCAGAAGAGGGCCAGCCCAGTTGCTGACATCCAGGAGGAAATTCTCAATGCTGCCGTGAAGGA  1292

Query 1557  CACACAGTCTGAGGACAGGGTGGAGCTGGACAGTCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATG  1630
            |||||||.|..|||||.||||||||.|||                                          |||
Sbjct 1293  CACACAGCCCAAGGACGGGGTGGAGATGG------------------------------------------ATG  1324

Query 1631  CCCCGGTGAAACACTCCAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGAC  1704
            |.||                                                                      
Sbjct 1325  CTCC----------------------------------------------------------------------  1328

Query 1705  ACAAAGGACAGACAGGTGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATGT  1778
                                                        |||||||||||||||||||.||||||||||
Sbjct 1329  --------------------------------------------GGCTGCTGCATCTGAAGCCCCCCAGGATGT  1358

Query 1779  GACCTACGCCCAGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAAC  1852
            ||||||||||||||||||||||||||||||.||||||.|||||||||||||||||||||||||||||.||||||
Sbjct 1359  GACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAAGGGAAC  1432

Query 1853  CTCCAGCTGAGCCCAGCATCTACGCCACTCTGGCCATCCAC  1893
            ||||||||||.|||||||||||||||.|.||||||||||||
Sbjct 1433  CTCCAGCTGAACCCAGCATCTACGCCCCCCTGGCCATCCAC  1473