Nucleotide Global Alignment
Description
- Query:
- TRCN0000476797
- Subject:
- NM_001278404.2
- Aligned Length:
- 1978
- Identities:
- 1189
- Gaps:
- 617
Alignment
Query 1 ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGGGGAGCCTGGAGGCCCAGGAGTACCGACTGGATAAAGAGGGAAGCCCAGAGCCCTTGGACAGAAATAACCCA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTGGAACCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGCACCATGCGGGGAGATACCGCTGCCA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGGATTCTACAACAAAC 370
|||||||||..||||...||||
Sbjct 1 ----------------------------------------------------ATGACAGGAGCCTACCCAAAAC 22
Query 371 CCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAG 444
|||||||||||||||.||||||||||||||||.|||||||.||.|...|||||||||..||||..||||||..|
Sbjct 23 CCACCCTCTCAGCCCAGCCCAGCCCTGTGGTGACCTCAGGAGGAAGGGTGACCCTCCAGTGTGAGTCACAGGTG 96
Query 445 GGATATCACCATTTTG--------TTCTGATG-AAGGAAGGAGAACACCAGCTCCCCCGGAC----CCTGGACT 505
| |||||.| ||||| || ||||||||||||.|..|.|.||| || ||||.|||
Sbjct 97 G--------CATTTGGCGGCTTCATTCTG-TGTAAGGAAGGAGAAGATGAACACCC----ACAATGCCTGAACT 157
Query 506 CACAGCAGCTCCA---CAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGAACCCCAGCCACAGGTGG 576
| .||||.||| |.|||||..||.||..|||.|.|||.|.|||||||||||||.|||.|..|.|||||||
Sbjct 158 C---CCAGCCCCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAATCGCAGGTGG 228
Query 577 AGGTTCACA--TGCTATTACTATTATATGAACACCCCCCAGGTGTGGTC-CCACCCCAGTGACCCCCTGGAGAT 647
..| |||| ||||||...|||.|..|||||.|.|||.|.|||||||| .|| ||||||||.|.|||||||.|
Sbjct 229 TCG--CACAGGTGCTATGGTTATGACTTGAACTCTCCCTATGTGTGGTCTTCA-CCCAGTGATCTCCTGGAGCT 299
Query 648 TCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTC-CTGACCCTGCA---GGGCCCTGTCCTGGCCCCTGGGCAG 717
.|||..|.||||.||.||||.||||||.||.||| |.| |||| |||.||||||.|||||||||||.|.
Sbjct 300 CCTGGTCCCAGGTGTTTCTAAGAAGCCATCACTCTCAG----TGCAGCCGGGTCCTGTCATGGCCCCTGGGGAA 369
Query 718 AGCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTT 791
|||||||||||||||||||.|||||||||||||||.|||||||||||||||||.||||||||||||||||||.|
Sbjct 370 AGCCTGACCCTCCAGTGTGTCTCTGATGTCGGCTATGACAGATTTGTTCTGTACAAGGAGGGGGAACGTGACCT 443
Query 792 CCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCT 865
.|.|||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 TCGCCAGCTCCCTGGCCGGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCT 517
Query 866 CCCACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTG 939
||.||||||||||||||||.|||||.||||||||||||||||||||.|||||.|||||||||||||||||||||
Sbjct 518 CCTACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCTGAGTGCTCGGCCCCCAGCGACCCCCTG 591
Query 940 AACATCCTGATGGCAGGACAGATCTATG--ACACCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCA 1011
.||||||||||..|||||||||||..|| ||||| ||.|.|.||||..|||||.||||||||||||||||||
Sbjct 592 GACATCCTGATCACAGGACAGATCCGTGGCACACC--CTTCATCTCAGTGCAGCCAGGCCCCACAGTGGCCTCA 663
Query 1012 GGAGAGAACGTGACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGC 1085
|||||||||||||||||||||||||||||||||.|||||||..|||||||||||||||||||.|..||.|||||
Sbjct 664 GGAGAGAACGTGACCCTGCTGTGTCAGTCATGGCGGCAGTTCCACACTTTCCTTCTGACCAAGGCGGGAGCAGC 737
Query 1086 CCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGA 1159
..||.|||||||.|||||.||||||||..|||.|..||.|||||||||||||||||||||||||||||||||||
Sbjct 738 TGATGCCCCACTCCGTCTAAGATCAATACACGAATATCCTAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGA 811
Query 1160 CCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAACCCCCACCTGCTGTCTTTCCCCAGT 1233
||||||||||||||||||||||||||||||||||||||..||.||||.|||||.|||||||||||..|||||||
Sbjct 812 CCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCACTCAACTCCGACCCCTACCTGCTGTCTCACCCCAGT 885
Query 1234 GAGCCCCTGGAACTCATGGTCTCAGGACACTC--TGGAGGCTCCAGCCTCCCACCCACAGGGCCGCCCTCCACA 1305
|||||||||||.|||.||||||||||||.||| || ||.|||||||.|||||||||.||.||...|||||||
Sbjct 886 GAGCCCCTGGAGCTCGTGGTCTCAGGACCCTCCATG--GGTTCCAGCCCCCCACCCACCGGTCCCATCTCCACA 957
Query 1306 CC---------------------------------------------------TGGTCTGGGAAGATACCTGGA 1328
|| ||||||||||||..||||||.
Sbjct 958 CCTGCAGGCCCTGAGGACCAGCCCCTCACCCCCACTGGGTCGGATCCCCAAAGTGGTCTGGGAAGGCACCTGGG 1031
Query 1329 GGTTTTGATTGGGGTCTCGGTGGCCTTCGTCCTGCTG------CTCTTCCTCCTCCTCTTCCTCCTCCTCCGAC 1396
||||.||||.||..|||.|||||||.|||||||.||| |||.|||||||||||||||||.|||||||||
Sbjct 1032 GGTTGTGATCGGCATCTTGGTGGCCGTCGTCCTACTGCTCCTCCTCCTCCTCCTCCTCTTCCTCATCCTCCGAC 1105
Query 1397 GTCAGCGTCACAGCAAACACAGGACATCTGA-CCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGA 1469
.||..|||||..||||||||.||||||| || ||||||||||.||||||||||.|.||||||||||||||.||.
Sbjct 1106 ATCGACGTCAGGGCAAACACTGGACATC-GACCCAGAGAAAGGCTGATTTCCAACATCCTGCAGGGGCTGTGGG 1178
Query 1470 GACAGAGCCCAAGGACAGGGGCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCTATG 1543
|.|||||||||..|||||.|||||||.|.|||||||||||||||||||.||||.||||||||||||||||||||
Sbjct 1179 GCCAGAGCCCACAGACAGAGGCCTGCAGTGGAGGTCCAGCCCAGCTGCCGACGCCCAGGAAGAAAACCTCTATG 1252
Query 1544 CTGCCGTGAAGGACACACAGTCTGAGGACAGGGTGGAGCTGGACAGTCAGAGCCCACACGATGAAGACCCCCAG 1617
||||||||||||||||||||.||||.||..||||||
Sbjct 1253 CTGCCGTGAAGGACACACAGCCTGAAGATGGGGTGG-------------------------------------- 1288
Query 1618 GCAGTGACGTATGCCCCGGTGAAACACTCCAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGG 1691
Sbjct 1289 -------------------------------------------------------------------------- 1288
Query 1692 GGAATTCCTGGACACAAAGGACAGACAGGTGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAG 1765
|||||||||||..|||||||||||||||||
Sbjct 1289 --------------------------------------------AGATGGACACTCGGGCTGCTGCATCTGAAG 1318
Query 1766 CCTCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCC 1839
||.||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1319 CCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGAAGGCAACTGAGCCTCCTCCATCC 1392
Query 1840 CAGGAAGGGGAACCTCCAGCTGAGCCCAGCATCTACGCCACTCTGGCCATCCAC 1893
||||||.||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1393 CAGGAAAGGGAACCTCCAGCTGAGCCCAGCATCTACGCCACCCTGGCCATCCAC 1446
