Nucleotide Global Alignment

Description

Query:
TRCN0000476797
Subject:
NM_001278429.3
Aligned Length:
2040
Identities:
1134
Gaps:
753

Alignment

Query    1  -------------ATGACG-------CCCGCCCT---------CACAGCCCTG-------CTCTGCCTTG--GG  36
                         ||||||       |||..|||         |||| |||||       ||.||.|.||  ||
Sbjct    1  ATGGAACAACCCCATGACGAGAAGGACCCAGCCTCCAAGCGGCCACA-CCCTGTGTGTCTCTTTGTCCTGCCGG  73

Query   37  --CTGAG----------TCT---------GGGCCCC----AGGA------------CCCGCGTGCA-GGC----  68
              |||||          |||         |||||||    ||||            |||.|.|.|| |||    
Sbjct   74  CACTGAGGACTCATCCATCTGCACAGCTGGGGCCCCTGGGAGGAGACGCCATGATCCCCACCTTCACGGCTCTG  147

Query   69  --------AGGGCCCTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCCCCGT  134
                    .||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.|.|.||
Sbjct  148  CTCTGCCTCGGGCCCCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGT  221

Query  135  GACCATCTGGTGTCAGGGGAGCCTGGAGGCCCAGGAGTACCGACTGGATAAAGAGGGAAGCCCAGAGCCCTTGG  208
            ||||||||||||||||||||.|||||||||.|.|||||||||.|||||||||||||.||||||||..||||.||
Sbjct  222  GACCATCTGGTGTCAGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAGCCCAGCACCCTGGG  295

Query  209  ACAGAAATAACCCACTGGAACCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGCACCATGCGGGG  282
            |||||.|.|||||||||||.||||||||||||||||||||||||||||||||||||||||||.||.||||.|||
Sbjct  296  ACAGACAGAACCCACTGGAGCCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGG  369

Query  283  AGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGG  356
            |||||||||||..|||||..||||.|||.||||||||||.|||||||.||||||||||||||||||||||||||
Sbjct  370  AGATACCGCTGTTACTATCGCAGCCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGG  443

Query  357  ATTCTACAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCGAT  430
            |..|||||..|||||||||||.|||||||||||.||.|||                                  
Sbjct  444  AGCCTACAGTAAACCCACCCTTTCAGCCCTGCCGAGTCCT----------------------------------  483

Query  431  GTGGCTCACAGAAGGGATATCACCATTTTGTTCTGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCCTGGAC  504
                                                                                      
Sbjct  484  --------------------------------------------------------------------------  483

Query  505  TCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGAACCCCAGCCACAGGTGGAG  578
                                                                                      
Sbjct  484  --------------------------------------------------------------------------  483

Query  579  GTTCACATGCTATTACTATTATATGAACACCCCCCAGGTGTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGC  652
                                                                                      
Sbjct  484  --------------------------------------------------------------------------  483

Query  653  CCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTGGGCAGAGCCTGACC  726
                                                                                      
Sbjct  484  --------------------------------------------------------------------------  483

Query  727  CTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTCCTCCAGCG  800
                                                                          |||         
Sbjct  484  --------------------------------------------------------------CTT---------  486

Query  801  CCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCCACGGGG  874
                                                                                      
Sbjct  487  --------------------------------------------------------------------------  486

Query  875  GCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGAACATCCTG  948
                                                                                      
Sbjct  487  --------------------------------------------------------------------------  486

Query  949  ATGGCAGGACAGATCTATGACACCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAGGAGAGAACGT  1022
                                                                  |||.||||||||.|||.|||
Sbjct  487  ------------------------------------------------------GTGACCTCAGGAAAGAGCGT  506

Query 1023  GACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGCCCATCCCCCAC  1096
            |||||||||||||||||||.||.|.|...|.||||||||.|||||||.|||.||..|||||||||||||||.||
Sbjct  507  GACCCTGCTGTGTCAGTCACGGAGCCCAATGGACACTTTTCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTAC  580

Query 1097  TGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCAC  1170
            |||.||||||||||..|.||||||||||..||.||||||||||||||||||||||||||||||||||||..|||
Sbjct  581  TGCATCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGTGCAC  654

Query 1171  GCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAACCCCCACCTGCTGTCTTTCCCCAGTGAGCCCCTGGA  1244
            |.|||||||||||||||||.|.|||||.||.|||.|..||.|.||||||||||...|||||||||.||||||||
Sbjct  655  GGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCCCACTACCTGCTGTCACACCCCAGTGACCCCCTGGA  728

Query 1245  ACTCATGGTCTCAGGACACTCTGGAGGCT-CCAGCCTCCCACCCACAGGGCC-----------------GCCCT  1300
            .|||||.|||||||||..|| ||||||.| ||||.|.|.||||||||.||.|                 |||||
Sbjct  729  GCTCATAGTCTCAGGATCCT-TGGAGGGTCCCAGGCCCTCACCCACAAGGTCCGTCTCAACAGCTGCAGGCCCT  801

Query 1301  -----------------------------------CCACACCTGGTCTGGGAAGATACCTGGAGGTTTTGATTG  1339
                                               ||||| .|||||||.||||..||..||||||..||||.|
Sbjct  802  GAGGACCAGCCCCTCATGCCTACAGGGTCAGTCCCCCACA-GTGGTCTGAGAAGGCACTGGGAGGTACTGATCG  874

Query 1340  GGGTCTCGGTGGCCTTCGTCCTGCTGCTCTTCCTCCTCCTCTTCCTCCTCCTCCGACGTCAGCGTCACAGCAAA  1413
            ||||||.|||||.||.|.|||||||.||||.|||||||||||||||||||||||.||....||||||..|.|||
Sbjct  875  GGGTCTTGGTGGTCTCCATCCTGCTTCTCTCCCTCCTCCTCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAA  948

Query 1414  CACAGGACATCTGACCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACAGAGCCCAAGGACAG  1487
            ||||||||||..|.|||||||.||.||||||||||.||||||.||||||||||.|||.||||||||||||||.|
Sbjct  949  CACAGGACATTGGCCCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGG  1022

Query 1488  GGGCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCT---ATGCTGCCGTGAAGGACA  1558
            ||||||.|.||||||||||||||||||||||||||||||||.|||||||.|||   .|||||||||||||.|||
Sbjct 1023  GGGCCTACAGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAACTTCTCAGGTGCTGCCGTGAAGAACA  1096

Query 1559  CACAGTCTGAGGACAGGGTGGAGCTGGACA---GTCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTAT  1629
            |||||.||||||||.|||||||..||||||   |.|||||||||||||||||||||||||||||||||||||||
Sbjct 1097  CACAGCCTGAGGACGGGGTGGAAATGGACACTCGGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTAT  1170

Query 1630  GCCCCGGTGAAACACTCCAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGA  1703
            |||..|||||||||||||||.||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1171  GCCAAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCCTCCCCACTGTCTGGGGAATTCCTGGA  1244

Query 1704  CACAAAGGACAGACAGGTGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATG  1777
            |||||||||||||||||..|||||||||||.|||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1245  CACAAAGGACAGACAGGCAGAAGAGGACAGACAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATG  1318

Query 1778  TGACCTACGCCCAGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAA  1851
            ||||||||||||.||||||||||||.|||||.||||.|||||||||||||||||||||||||||||||||||..
Sbjct 1319  TGACCTACGCCCGGCTGCACAGCTTTACCCTCAGACAGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCC  1392

Query 1852  CCTCCAGCTGAGCCCAGCATCTACGCCACTCTGGCCATCCAC  1893
            .||||||||||||||||..||||.||||||||||||||||||
Sbjct 1393  TCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCATCCAC  1434

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