Nucleotide Global Alignment
Description
- Query:
- TRCN0000476797
- Subject:
- XM_017026215.1
- Aligned Length:
- 2075
- Identities:
- 1135
- Gaps:
- 787
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAACAACCCCATGACGAGAAGGACCCAGCCTCCAAGCGGCCACACCCTGTGTGTCTCTTTGTCCTGCCGGC 74
Query 1 -------------------------------------------------ATGACGCCCGCCCTCACAGCCCTGC 25
||||..|||.||.||||.||.||||
Sbjct 75 ACTGAGGACTCATCCATCTGCACAGCTGGGGCCCCTGGGAGGAGACGCCATGATCCCCACCTTCACGGCTCTGC 148
Query 26 TCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCCCTTCCCCAAACCCACCCTCTGGGCT 99
|||||||.|||||||||||||||||||||||||.|.||||||||||||||.|||||||||||||||||||||||
Sbjct 149 TCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCCACATGCAGGCAGGGCCCCTCCCCAAACCCACCCTCTGGGCT 222
Query 100 GAGCCAGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGAGCCTGGAGGCCCAGGAGTA 173
||||||||||||||||||||||||||||.|.|.||||||||||||||||||||||.|||||||||.|.||||||
Sbjct 223 GAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTCAGGGGACCCTGGAGGCTCGGGAGTA 296
Query 174 CCGACTGGATAAAGAGGGAAGCCCAGAGCCCTTGGACAGAAATAACCCACTGGAACCCAAGAACAAGGCCAGAT 247
|||.|||||||||||||.||||||||..||||.|||||||.|.|||||||||||.|||||||||||||||||||
Sbjct 297 CCGTCTGGATAAAGAGGAAAGCCCAGCACCCTGGGACAGACAGAACCCACTGGAGCCCAAGAACAAGGCCAGAT 370
Query 248 TCTCCATCCCATCCATGACAGAGCACCATGCGGGGAGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCA 321
|||||||||||||||||||||||.||.||||.||||||||||||||..|||||..||||.|||.||||||||||
Sbjct 371 TCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTGTTACTATCGCAGCCCTGTAGGCTGGTCA 444
Query 322 GAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGGATTCTACAACAAACCCACCCTCTCAGCCCTGCCCAGCCC 395
.|||||||.|||||||||||||||||||||||||||..|||||..|||||||||||.|||||||||||.||.||
Sbjct 445 CAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACAGTAAACCCACCCTTTCAGCCCTGCCGAGTCC 518
Query 396 TGTGGTGGCCTCAGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAGGGATATCACCATTTTGTTCTGATGA 469
|
Sbjct 519 T------------------------------------------------------------------------- 519
Query 470 AGGAAGGAGAACACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTC 543
Sbjct 520 -------------------------------------------------------------------------- 519
Query 544 CCTGTGGGCCCCGTGAACCCCAGCCACAGGTGGAGGTTCACATGCTATTACTATTATATGAACACCCCCCAGGT 617
Sbjct 520 -------------------------------------------------------------------------- 519
Query 618 GTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGC 691
Sbjct 520 -------------------------------------------------------------------------- 519
Query 692 AGGGCCCTGTCCTGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTT 765
Sbjct 520 -------------------------------------------------------------------------- 519
Query 766 CTGTATAAGGAGGGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAA 839
|||
Sbjct 520 -----------------------CTT------------------------------------------------ 522
Query 840 CTTCACCCTGGGCCCTGTGAGCCGCTCCCACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCG 913
Sbjct 523 -------------------------------------------------------------------------- 522
Query 914 AGTGGTCGGCCCCCAGCGACCCCCTGAACATCCTGATGGCAGGACAGATCTATGACACCGTCTCCCTGTCAGCA 987
Sbjct 523 -------------------------------------------------------------------------- 522
Query 988 CAGCCGGGCCCCACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTT 1061
|||.||||||||.|||.||||||||||||||||||||||.||.|.|...|.||||||||
Sbjct 523 ---------------GTGACCTCAGGAAAGAGCGTGACCCTGCTGTGTCAGTCACGGAGCCCAATGGACACTTT 581
Query 1062 CCTTCTGACCAAAGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGG 1135
.|||||||.|||.||..|||||||||||||||.|||||.||||||||||..|.||||||||||..||.||||||
Sbjct 582 TCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGG 655
Query 1136 CTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAAC 1209
||||||||||||||||||||||||||||||..||||.|||||||||||||||||.|.|||||.||.|||.|..|
Sbjct 656 CTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCC 729
Query 1210 CCCCACCTGCTGTCTTTCCCCAGTGAGCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGCT-CCAGCCTCC 1282
|.|.||||||||||...|||||||||.||||||||.|||||.|||||||||..|| ||||||.| ||||.|.|.
Sbjct 730 CACTACCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGATCCT-TGGAGGGTCCCAGGCCCT 802
Query 1283 CACCCACAGGGCC-----------------GCCCT-----------------------------------CCAC 1304
||||||||.||.| ||||| ||||
Sbjct 803 CACCCACAAGGTCCGTCTCAACAGCTGCAGGCCCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGTCCCCCAC 876
Query 1305 ACCTGGTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCCTTCGTCCTGCTGCTCTTCCTCCTCC 1378
| .|||||||.||||..||..||||||..||||.|||||||.|||||.||.|.|||||||.||||.||||||||
Sbjct 877 A-GTGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTCTCCATCCTGCTTCTCTCCCTCCTCC 949
Query 1379 TCTTCCTCCTCCTCCGACGTCAGCGTCACAGCAAACACAGGACATCTGACCAGAGAAAGACTGATTTCCAGCGT 1452
|||||||||||||||.||....||||||..|.|||||||||||||..|.|||||||.||.||||||||||.|||
Sbjct 950 TCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGCCCAGAGACAGGCTGATTTCCAACGT 1023
Query 1453 CCTGCAGGGGCTGCGGAGACAGAGCCCAAGGACAGGGGCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTCCA 1526
|||.||||||||||.|||.||||||||||||||.|||||||.|.||||||||||||||||||||||||||||||
Sbjct 1024 CCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGAGGTCCAGCCCAGCTGCTGACGTCCA 1097
Query 1527 GGAAGAAAACCTCT---ATGCTGCCGTGAAGGACACACAGTCTGAGGACAGGGTGGAGCTGGACA---GTCAGA 1594
||.|||||||.||| .|||||||||||||.||||||||.||||||||.|||||||..|||||| |.||||
Sbjct 1098 GGGAGAAAACTTCTCAGGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGGGTGGAAATGGACACTCGGCAGA 1171
Query 1595 GCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACACTCCAGTCCTAGGAGAGAAATGGCC 1668
||||||||||||||||||||||||||||||||||||||..|||||||||||||||.||||||||||||||||||
Sbjct 1172 GCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCC 1245
Query 1669 TCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGTGGAAGAGGACAGGCAGATGGA 1742
||||||||||||.|||||||||||||||||||||||||||||||||||||||..|||||||||||.||||||||
Sbjct 1246 TCTCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCAGAAGAGGACAGACAGATGGA 1319
Query 1743 CACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTTAGACGGA 1816
|||||||||||||||||||||||||.|||||||||||||||||||||.||||||||||||.|||||.||||.||
Sbjct 1320 CACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTGCACAGCTTTACCCTCAGACAGA 1393
Query 1817 AGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAACCTCCAGCTGAGCCCAGCATCTACGCCACTCTGGCCATC 1890
|||||||||||||||||||||||||||||||||...||||||||||||||||..||||.|||||||||||||||
Sbjct 1394 AGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCATC 1467
Query 1891 CAC 1893
|||
Sbjct 1468 CAC 1470
