Nucleotide Global Alignment

Description

Query:
TRCN0000476850
Subject:
XM_006522416.3
Aligned Length:
2224
Identities:
1850
Gaps:
221

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTAGAACGGAAGAAACCCAAGACAGCTGAAAACCAGAAGGCATCTGAGGAGAATGAGATTACTCAGCCGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGATCCAGCGCCAAGCCGGCCCTTCCCTGCCTGAACTTTGAAGCTGTTTTGTCTCCAGCCCCAGCCCTCATCC  148

Query    1  -----------------------------------------------------------------------ATG  3
                                                                                   |||
Sbjct  149  ACTCGACACATTCACTGACAAACTCTCACGCTCACACCGGGTCATCTGATTGTGACATCAGTTGCAAGGGGATG  222

Query    4  ACCGAGCGCATTCACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCTCAACGAGCAGCGCAA  77
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACCGAGCGCATTCACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCTCAACGAGCAGCGCAA  296

Query   78  CCGTGGCCACTTCTGTGACGTAACGGTGCGCATCCACGGGAGCATGCTGCGCGCACACCGCTGCGTGCTGGCAG  151
            |||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  297  CCGTGGCCACTTCTGTGACGTGACGGTTCGCATCCACGGGAGCATGCTGCGCGCACATCGCTGCGTGCTGGCAG  370

Query  152  CCGGCAGCCCCTTCTTCCAGGACAAACTGCTGCTTGGCTACAGCGACATCGAGATCCCGTCGGTGGTGTCAGTG  225
            |||||||||||||||||||.|||||.||||||||.|||||||||||||||||.|||||||||||||||||.||.
Sbjct  371  CCGGCAGCCCCTTCTTCCAAGACAAGCTGCTGCTGGGCTACAGCGACATCGAAATCCCGTCGGTGGTGTCCGTA  444

Query  226  CAGTCAGTGCAAAAGCTCATTGACTTCATGTACAGCGGCGTGCTACGGGTCTCGCAGTCGGAAGCTCTGCAGAT  299
            ||.||.||||||||||||||||||||||||||||||||.|||||..|.|||||.||||||||||||||||||||
Sbjct  445  CAATCGGTGCAAAAGCTCATTGACTTCATGTACAGCGGTGTGCTGAGAGTCTCACAGTCGGAAGCTCTGCAGAT  518

Query  300  CCTCACGGCCGCCAGCATCCTGCAGATCAAAACAGTCATCGACGAGTGCACGCGCATCGTGTCACAGAACGTGG  373
            ||||||.||||||||||||||||||||||||||||||||.||.||||||||.||||||||||||||||||||||
Sbjct  519  CCTCACAGCCGCCAGCATCCTGCAGATCAAAACAGTCATAGATGAGTGCACTCGCATCGTGTCACAGAACGTGG  592

Query  374  GCGATGTGTTCCCGGGGATCCAGGACTCGGGCCAGGACACGCCGCGGGGCACTCCCGAGTCAGGCACGTCAGGC  447
            |||||||||||||.||.||||||||.||.|||||||||||.||..|.|||||.||.|||||||||||.||.|||
Sbjct  593  GCGATGTGTTCCCAGGCATCCAGGATTCTGGCCAGGACACACCAAGAGGCACACCAGAGTCAGGCACATCTGGC  666

Query  448  CAGAGCAGCGACACGGAGTCGGGCTACCTGCAGAGCCACCCACAGCACAGCGTGGACAGGATCTACTCGGCACT  521
            ||||||||.||||||||.||.||||||||||||||||||||||||||.||.||||||.|.||||||||.|||||
Sbjct  667  CAGAGCAGTGACACGGAATCAGGCTACCTGCAGAGCCACCCACAGCATAGTGTGGACCGAATCTACTCCGCACT  740

Query  522  CTACGCGTGCTCCATGCAGAATGGCAGCGGCGAGCGCTCTTTTTACAGCGGCGCAGTGGTCAGCCACCACGAGA  595
            ||||||.||||||||||||||||||||||||||||||||.||.|||||.||.||||||||||||||||||||.|
Sbjct  741  CTACGCCTGCTCCATGCAGAATGGCAGCGGCGAGCGCTCCTTCTACAGTGGTGCAGTGGTCAGCCACCACGAAA  814

Query  596  CTGCGCTCGGCCTGCCCCGCGACCACCACATGGAAGACCCCAGCTGGATCACACGCATCCATGAGCGCTCGCAG  669
            |.||.||||||||||||||.||||||||||||||||||||.|||||||||||||||||.|||||||||||.|||
Sbjct  815  CAGCTCTCGGCCTGCCCCGTGACCACCACATGGAAGACCCTAGCTGGATCACACGCATTCATGAGCGCTCCCAG  888

Query  670  CAGATGGAGCGCTACCTGTCCACCACCCCCGAGACCACGCACTGCCGCAAGCAGCCCCGGCCTGTGCGCATCCA  743
            ||.||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||.|||||
Sbjct  889  CAAATGGAGCGCTACCTGTCCACCACCCCTGAGACCACGCACTGCCGGAAGCAGCCCCGGCCTGTGCGTATCCA  962

Query  744  GACCCTAGTGGGCAACATCCACATCAAGCAGGAGATGGAGGACGATTACGACTACTACGGGCAGCAAAGGGTGC  817
            ||||||.|||||.||||||||||||||||||||.|||||.||.||.||.||||||||.||||||||||||||||
Sbjct  963  GACCCTGGTGGGTAACATCCACATCAAGCAGGAAATGGAAGATGACTATGACTACTATGGGCAGCAAAGGGTGC  1036

Query  818  AGATCCTGGAACGCAACGAATCCGAGGAGTGCACGGAAGACACAGACCAGGCCGAGGGCACCGAGAGTGAGCCC  891
            |||||||.||||||||.|||||||||||||||||.||||||||.|||||.||.||||||||.|||||.||||||
Sbjct 1037  AGATCCTAGAACGCAATGAATCCGAGGAGTGCACAGAAGACACTGACCAAGCAGAGGGCACTGAGAGCGAGCCC  1110

Query  892  AAAGGTGAAAGCTTCGACTCGGGCGTCAGCTCCTCCATAGGCACCGAGCCTGACTCGGTGGAGCAGCAGTTTGG  965
            ||||||||||||||.||.||.||.||||||||||||||.||||||||.||||||||.||||||||.||||||||
Sbjct 1111  AAAGGTGAAAGCTTTGATTCTGGGGTCAGCTCCTCCATCGGCACCGAACCTGACTCAGTGGAGCAACAGTTTGG  1184

Query  966  GCCTGGGGCGGCGCGGGACAGCCAGGCTGAACCCACCCAACCCGAGCAGGCTGCAGAAGCCCCCGCTGAGGGTG  1039
            |.|.|..||..|..|||||.|.|||||.||||||.|||||||.||||||||.|||||||||||.||||||.|..
Sbjct 1185  GGCAGCAGCCCCAAGGGACGGTCAGGCAGAACCCGCCCAACCTGAGCAGGCAGCAGAAGCCCCAGCTGAGAGCA  1258

Query 1040  GTCCGCAGACAAACCAGCTAGAAACAGGTGCTTCCTCTCCGGAGAGAAGCAATGAAGT-GGAGATGGACAGCAC  1112
            ||.|.|||.||||||||||||||.|||||||.||||||||.|||||||||||.| ||| .||||||||||.|||
Sbjct 1259  GTGCCCAGCCAAACCAGCTAGAACCAGGTGCCTCCTCTCCTGAGAGAAGCAACG-AGTCAGAGATGGACAACAC  1331

Query 1113  TGTTATCACTGTCAGCAACAGCTCCGACAAGAGCGTCCTACAACAGCCTTCGGTCAACACGTCCATCGGGCAGC  1186
            .||.|||||||||||.|||||||||||.|||.||||||||||.||||||||.||||||||.|||||||||||||
Sbjct 1332  AGTCATCACTGTCAGTAACAGCTCCGATAAGGGCGTCCTACAGCAGCCTTCAGTCAACACATCCATCGGGCAGC  1405

Query 1187  CATTGCCAAGTACCCAGCTCTACTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGGATGCCTCTGACCTTG  1260
            ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406  CATTGCCAAGTACCCAGCTCTATTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGGATGCCTCTGACCTTG  1479

Query 1261  ACCAGCAACACGCAGGTCATTGGCACAGCTGGCAACACCTACCTGCCAGCCCTCTTCACTACCCAGCCCGCGGG  1334
            |||||||||||.||||||||||||||.||||||||||||||.|||||||||||||||||||||||.||||||||
Sbjct 1480  ACCAGCAACACACAGGTCATTGGCACCGCTGGCAACACCTATCTGCCAGCCCTCTTCACTACCCAACCCGCGGG  1553

Query 1335  CAGTGGCCCCAAGCCTTTCCTCTTCAGCCTGCCACAGCCCCTGGCAGGCCAGCAGACCCAGTTTGTGACAGTGT  1408
            ||||||||||||||||||.||||||||||||||.|||||||||.||||||||||||||||||||||||||||||
Sbjct 1554  CAGTGGCCCCAAGCCTTTTCTCTTCAGCCTGCCGCAGCCCCTGACAGGCCAGCAGACCCAGTTTGTGACAGTGT  1627

Query 1409  TCCAGCCCGGTCTGTCGACCTTTACTGCACAGCTGCCAGCGCCACAGCCCCTGGCCTCATCCGCAGGCCACAGC  1482
            .|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1628  CCCAGCCCGGTCTGTCCACCTTTACTGCACAGCTGCCAGCGCCACAGCCCCTGGCCTCATCTGCAGGCCACAGC  1701

Query 1483  ACAGCCAGTGGGCAAGGCGAAAAAAAGCCTTATGAGTGCACTCTCTGCAACAAGACTTTCACCGCCAAACAGAA  1556
            ||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1702  ACAGCCAGTGGGCAAGGCGACAAAAAGCCTTATGAGTGCACTCTCTGCAACAAGACTTTCACAGCCAAACAGAA  1775

Query 1557  CTACGTCAAGCACATGTTCGTACACACAGGTGAGAAGCCCCACCAATGCAGCATCTGTTGGCGCTCCTTCTCCT  1630
            ||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||||||||||
Sbjct 1776  CTACGTCAAGCACATGTTCGTACATACAGGTGAGAAGCCCCACCAGTGCAGCATCTGCTGGCGCTCCTTCTCCT  1849

Query 1631  TAAAGGATTACCTTATCAAGCACATGGTGACACACACAGGAGTGAGGGCATACCAGTGTAGTATCTGCAACAAG  1704
            |.|||||||||||||||||||||||||||||.|||||.||.|||||.||.|||||||||||.||||||||||||
Sbjct 1850  TGAAGGATTACCTTATCAAGCACATGGTGACGCACACCGGCGTGAGAGCGTACCAGTGTAGCATCTGCAACAAG  1923

Query 1705  CGCTTCACCCAGAAGAGCTCCCTCAACGTGCACATGCGCCTCCACCGGGGAGAGAAGTCCTACGAGTGCTACAT  1778
            |||||||||||||||||.|||||||||||||||||||||||.|||||.||.|||||||||||.|||||||||||
Sbjct 1924  CGCTTCACCCAGAAGAGTTCCCTCAACGTGCACATGCGCCTGCACCGCGGGGAGAAGTCCTATGAGTGCTACAT  1997

Query 1779  CTGCAAAAAGAAGTTCTCTCACAAGACCCTCCTGGAGCGACACGTGGCCCTGCACAGTGCCAGCAATGGGACCC  1852
            ||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1998  CTGCAAAAAGAAGTTCTCCCACAAGACCCTGCTGGAGCGACACGTGGCCCTGCACAGTGCCAGCAACGGGACCC  2071

Query 1853  CCCCTGCAGGCACACCCCCAGGTGCCCGCGCTGGCCCCCCAGGCGTGGTGGCCTGCACGGAGGGGACCACTTAC  1926
            |.||.||||||||.|||||||||||||||||.||.||.||||||||||||||||||||.|||||||||||||||
Sbjct 2072  CTCCGGCAGGCACGCCCCCAGGTGCCCGCGCGGGTCCGCCAGGCGTGGTGGCCTGCACAGAGGGGACCACTTAC  2145

Query 1927  GTCTGCTCCGTCTGCCCAGCAAAGTTTGACCAAATCGAGCAGTTCAACGACCACATGAGGATGCATGTGTCTGA  2000
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2146  GTCTGCTCCGTCTGCCCAGCAAAGTTTGACCAAATCGAGCAGTTCAACGACCACATGAGGATGCATGTGTCTGA  2219

Query 2001  CGGA  2004
            ||||
Sbjct 2220  CGGA  2223

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