Nucleotide Global Alignment

Description

Query:
TRCN0000476850
Subject:
XM_017317087.1
Aligned Length:
2239
Identities:
1850
Gaps:
236

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAAATGCGAAAGGGAAGCAGTAGGAAGAAACCCAAGACAGCTGAAAACCAGAAGGCATCTGAGGAGAATGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GATTACTCAGCCGGGCGGATCCAGCGCCAAGCCGGCCCTTCCCTGCCTGAACTTTGAAGCTGTTTTGTCTCCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCCAGCCCTCATCCACTCGACACATTCACTGACAAACTCTCACGCTCACACCGGGTCATCTGATTGTGACATC  222

Query    1  ------------ATGACCGAGCGCATTCACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCT  62
                        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGTTGCAAGGGGATGACCGAGCGCATTCACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCT  296

Query   63  CAACGAGCAGCGCAACCGTGGCCACTTCTGTGACGTAACGGTGCGCATCCACGGGAGCATGCTGCGCGCACACC  136
            ||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||.|
Sbjct  297  CAACGAGCAGCGCAACCGTGGCCACTTCTGTGACGTGACGGTTCGCATCCACGGGAGCATGCTGCGCGCACATC  370

Query  137  GCTGCGTGCTGGCAGCCGGCAGCCCCTTCTTCCAGGACAAACTGCTGCTTGGCTACAGCGACATCGAGATCCCG  210
            ||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||||||||||||||.||||||
Sbjct  371  GCTGCGTGCTGGCAGCCGGCAGCCCCTTCTTCCAAGACAAGCTGCTGCTGGGCTACAGCGACATCGAAATCCCG  444

Query  211  TCGGTGGTGTCAGTGCAGTCAGTGCAAAAGCTCATTGACTTCATGTACAGCGGCGTGCTACGGGTCTCGCAGTC  284
            |||||||||||.||.||.||.||||||||||||||||||||||||||||||||.|||||..|.|||||.|||||
Sbjct  445  TCGGTGGTGTCCGTACAATCGGTGCAAAAGCTCATTGACTTCATGTACAGCGGTGTGCTGAGAGTCTCACAGTC  518

Query  285  GGAAGCTCTGCAGATCCTCACGGCCGCCAGCATCCTGCAGATCAAAACAGTCATCGACGAGTGCACGCGCATCG  358
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||.||.||||||||.|||||||
Sbjct  519  GGAAGCTCTGCAGATCCTCACAGCCGCCAGCATCCTGCAGATCAAAACAGTCATAGATGAGTGCACTCGCATCG  592

Query  359  TGTCACAGAACGTGGGCGATGTGTTCCCGGGGATCCAGGACTCGGGCCAGGACACGCCGCGGGGCACTCCCGAG  432
            ||||||||||||||||||||||||||||.||.||||||||.||.|||||||||||.||..|.|||||.||.|||
Sbjct  593  TGTCACAGAACGTGGGCGATGTGTTCCCAGGCATCCAGGATTCTGGCCAGGACACACCAAGAGGCACACCAGAG  666

Query  433  TCAGGCACGTCAGGCCAGAGCAGCGACACGGAGTCGGGCTACCTGCAGAGCCACCCACAGCACAGCGTGGACAG  506
            ||||||||.||.|||||||||||.||||||||.||.||||||||||||||||||||||||||.||.||||||.|
Sbjct  667  TCAGGCACATCTGGCCAGAGCAGTGACACGGAATCAGGCTACCTGCAGAGCCACCCACAGCATAGTGTGGACCG  740

Query  507  GATCTACTCGGCACTCTACGCGTGCTCCATGCAGAATGGCAGCGGCGAGCGCTCTTTTTACAGCGGCGCAGTGG  580
            .||||||||.|||||||||||.||||||||||||||||||||||||||||||||.||.|||||.||.|||||||
Sbjct  741  AATCTACTCCGCACTCTACGCCTGCTCCATGCAGAATGGCAGCGGCGAGCGCTCCTTCTACAGTGGTGCAGTGG  814

Query  581  TCAGCCACCACGAGACTGCGCTCGGCCTGCCCCGCGACCACCACATGGAAGACCCCAGCTGGATCACACGCATC  654
            |||||||||||||.||.||.||||||||||||||.||||||||||||||||||||.|||||||||||||||||.
Sbjct  815  TCAGCCACCACGAAACAGCTCTCGGCCTGCCCCGTGACCACCACATGGAAGACCCTAGCTGGATCACACGCATT  888

Query  655  CATGAGCGCTCGCAGCAGATGGAGCGCTACCTGTCCACCACCCCCGAGACCACGCACTGCCGCAAGCAGCCCCG  728
            |||||||||||.|||||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||
Sbjct  889  CATGAGCGCTCCCAGCAAATGGAGCGCTACCTGTCCACCACCCCTGAGACCACGCACTGCCGGAAGCAGCCCCG  962

Query  729  GCCTGTGCGCATCCAGACCCTAGTGGGCAACATCCACATCAAGCAGGAGATGGAGGACGATTACGACTACTACG  802
            |||||||||.|||||||||||.|||||.||||||||||||||||||||.|||||.||.||.||.||||||||.|
Sbjct  963  GCCTGTGCGTATCCAGACCCTGGTGGGTAACATCCACATCAAGCAGGAAATGGAAGATGACTATGACTACTATG  1036

Query  803  GGCAGCAAAGGGTGCAGATCCTGGAACGCAACGAATCCGAGGAGTGCACGGAAGACACAGACCAGGCCGAGGGC  876
            ||||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||.|||||.||.||||||
Sbjct 1037  GGCAGCAAAGGGTGCAGATCCTAGAACGCAATGAATCCGAGGAGTGCACAGAAGACACTGACCAAGCAGAGGGC  1110

Query  877  ACCGAGAGTGAGCCCAAAGGTGAAAGCTTCGACTCGGGCGTCAGCTCCTCCATAGGCACCGAGCCTGACTCGGT  950
            ||.|||||.||||||||||||||||||||.||.||.||.||||||||||||||.||||||||.||||||||.||
Sbjct 1111  ACTGAGAGCGAGCCCAAAGGTGAAAGCTTTGATTCTGGGGTCAGCTCCTCCATCGGCACCGAACCTGACTCAGT  1184

Query  951  GGAGCAGCAGTTTGGGCCTGGGGCGGCGCGGGACAGCCAGGCTGAACCCACCCAACCCGAGCAGGCTGCAGAAG  1024
            ||||||.|||||||||.|.|..||..|..|||||.|.|||||.||||||.|||||||.||||||||.|||||||
Sbjct 1185  GGAGCAACAGTTTGGGGCAGCAGCCCCAAGGGACGGTCAGGCAGAACCCGCCCAACCTGAGCAGGCAGCAGAAG  1258

Query 1025  CCCCCGCTGAGGGTGGTCCGCAGACAAACCAGCTAGAAACAGGTGCTTCCTCTCCGGAGAGAAGCAATGAAGT-  1097
            ||||.||||||.|..||.|.|||.||||||||||||||.|||||||.||||||||.|||||||||||.| ||| 
Sbjct 1259  CCCCAGCTGAGAGCAGTGCCCAGCCAAACCAGCTAGAACCAGGTGCCTCCTCTCCTGAGAGAAGCAACG-AGTC  1331

Query 1098  GGAGATGGACAGCACTGTTATCACTGTCAGCAACAGCTCCGACAAGAGCGTCCTACAACAGCCTTCGGTCAACA  1171
            .||||||||||.|||.||.|||||||||||.|||||||||||.|||.||||||||||.||||||||.|||||||
Sbjct 1332  AGAGATGGACAACACAGTCATCACTGTCAGTAACAGCTCCGATAAGGGCGTCCTACAGCAGCCTTCAGTCAACA  1405

Query 1172  CGTCCATCGGGCAGCCATTGCCAAGTACCCAGCTCTACTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGG  1245
            |.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1406  CATCCATCGGGCAGCCATTGCCAAGTACCCAGCTCTATTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGG  1479

Query 1246  ATGCCTCTGACCTTGACCAGCAACACGCAGGTCATTGGCACAGCTGGCAACACCTACCTGCCAGCCCTCTTCAC  1319
            ||||||||||||||||||||||||||.||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 1480  ATGCCTCTGACCTTGACCAGCAACACACAGGTCATTGGCACCGCTGGCAACACCTATCTGCCAGCCCTCTTCAC  1553

Query 1320  TACCCAGCCCGCGGGCAGTGGCCCCAAGCCTTTCCTCTTCAGCCTGCCACAGCCCCTGGCAGGCCAGCAGACCC  1393
            ||||||.||||||||||||||||||||||||||.||||||||||||||.|||||||||.|||||||||||||||
Sbjct 1554  TACCCAACCCGCGGGCAGTGGCCCCAAGCCTTTTCTCTTCAGCCTGCCGCAGCCCCTGACAGGCCAGCAGACCC  1627

Query 1394  AGTTTGTGACAGTGTTCCAGCCCGGTCTGTCGACCTTTACTGCACAGCTGCCAGCGCCACAGCCCCTGGCCTCA  1467
            |||||||||||||||.|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628  AGTTTGTGACAGTGTCCCAGCCCGGTCTGTCCACCTTTACTGCACAGCTGCCAGCGCCACAGCCCCTGGCCTCA  1701

Query 1468  TCCGCAGGCCACAGCACAGCCAGTGGGCAAGGCGAAAAAAAGCCTTATGAGTGCACTCTCTGCAACAAGACTTT  1541
            ||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1702  TCTGCAGGCCACAGCACAGCCAGTGGGCAAGGCGACAAAAAGCCTTATGAGTGCACTCTCTGCAACAAGACTTT  1775

Query 1542  CACCGCCAAACAGAACTACGTCAAGCACATGTTCGTACACACAGGTGAGAAGCCCCACCAATGCAGCATCTGTT  1615
            |||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.|
Sbjct 1776  CACAGCCAAACAGAACTACGTCAAGCACATGTTCGTACATACAGGTGAGAAGCCCCACCAGTGCAGCATCTGCT  1849

Query 1616  GGCGCTCCTTCTCCTTAAAGGATTACCTTATCAAGCACATGGTGACACACACAGGAGTGAGGGCATACCAGTGT  1689
            ||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||.|||||.||.|||||||||
Sbjct 1850  GGCGCTCCTTCTCCTTGAAGGATTACCTTATCAAGCACATGGTGACGCACACCGGCGTGAGAGCGTACCAGTGT  1923

Query 1690  AGTATCTGCAACAAGCGCTTCACCCAGAAGAGCTCCCTCAACGTGCACATGCGCCTCCACCGGGGAGAGAAGTC  1763
            ||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||.||.||||||||
Sbjct 1924  AGCATCTGCAACAAGCGCTTCACCCAGAAGAGTTCCCTCAACGTGCACATGCGCCTGCACCGCGGGGAGAAGTC  1997

Query 1764  CTACGAGTGCTACATCTGCAAAAAGAAGTTCTCTCACAAGACCCTCCTGGAGCGACACGTGGCCCTGCACAGTG  1837
            |||.|||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||
Sbjct 1998  CTATGAGTGCTACATCTGCAAAAAGAAGTTCTCCCACAAGACCCTGCTGGAGCGACACGTGGCCCTGCACAGTG  2071

Query 1838  CCAGCAATGGGACCCCCCCTGCAGGCACACCCCCAGGTGCCCGCGCTGGCCCCCCAGGCGTGGTGGCCTGCACG  1911
            |||||||.||||||||.||.||||||||.|||||||||||||||||.||.||.||||||||||||||||||||.
Sbjct 2072  CCAGCAACGGGACCCCTCCGGCAGGCACGCCCCCAGGTGCCCGCGCGGGTCCGCCAGGCGTGGTGGCCTGCACA  2145

Query 1912  GAGGGGACCACTTACGTCTGCTCCGTCTGCCCAGCAAAGTTTGACCAAATCGAGCAGTTCAACGACCACATGAG  1985
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2146  GAGGGGACCACTTACGTCTGCTCCGTCTGCCCAGCAAAGTTTGACCAAATCGAGCAGTTCAACGACCACATGAG  2219

Query 1986  GATGCATGTGTCTGACGGA  2004
            |||||||||||||||||||
Sbjct 2220  GATGCATGTGTCTGACGGA  2238

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