Nucleotide Global Alignment
Description
- Query:
- TRCN0000476912
- Subject:
- NR_103518.2
- Aligned Length:
- 2778
- Identities:
- 1284
- Gaps:
- 1356
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCAGCCTGGGCGGCACAGCCAGATGCGAGATGCGTCTCTGCTGATCTGAGTCTGCCTGCAGCATGGACCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTTCCCTGAAGCATCTCCAGGGCTGGAGGGACGACTGCCATGCACCGAGGGCTCATCCATCCACAGAGCAGGG 148
Query 1 -----------------ATGACCCCCATCGTCACAGTCCTGATCTGTCTCAGGCTGAGTCTGGGCCCCCGGACC 57
||||||||||||.||||.|||||||||||||||.|||||||||||||||||||||||
Sbjct 149 CAGTGGGAGGAGACGCCATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACC 222
Query 58 CACGTGCAGGCAGGGACCCTCCCCAAGCCCACACTCTGGGCTGAGCCAGGCTCTGTGATCACCCAGGGGAGTCC 131
|||||||||||||||..|||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 223 CACGTGCAGGCAGGGCACCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCC 296
Query 132 CGTGACCCTCTGGTGTCAGGGGATCCTGGAGACCCAGGAGTACCGTCTGTATAGAGAAAAGAAAACAGCACCCT 205
.|||||||||.|||||||||||..||.|||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 297 TGTGACCCTCAGGTGTCAGGGGGGCCAGGAGACCCAGGAGTACCGTCTATATAGAGAAAAGAAAACAGCACCCT 370
Query 206 GGATTACACGGATCCCACAGGAGATTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACA 279
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGATTACACGGATCCCACAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACA 444
Query 280 GGGCGGTATCGCTGTTTCTACGGTAGCCACACTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGT 353
||||||||||||||||.|||.||||||.|||||||||||.|.||||||..||||||||||||||||||||||||
Sbjct 445 GGGCGGTATCGCTGTTACTATGGTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGT 518
Query 354 GACAGGAGCCTACATCAAACCCACCCTCTCAGCTCTACCCAGCCCTGTGGTGACCTCAGGAGGGAACGTGACCC 427
|||||||||||||||||||||||||||||||||.|..||||||||.|||||||.||||||||||||.||.||||
Sbjct 519 GACAGGAGCCTACATCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCC 592
Query 428 TCCATTGTGTCTCACAGGTGGCATTTGGCAGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGC 501
||||.||||.|||||||||||||||||...||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCAGTGTGACTCACAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGC 666
Query 502 CTGAACTCACAGCCCCGTACCCATGGGTGGTCCCGGGCCATCTTCTCTGTGGGCCCCGTGAGCCCGAGTCGCAG 575
||||||||.|||||||.|.|||.|||||.||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct 667 CTGAACTCCCAGCCCCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAG 740
Query 576 GTGGTCGTACAGGTGCTATGCTTATGACTCGAACTCTCCCCATGTGTGGTCTCTACCCAGTGATCTCCTGGAGC 649
|||||.||||||||||||||||||||||||||||||||||.|||.|||||||||||||||||||||||||||||
Sbjct 741 GTGGTGGTACAGGTGCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGC 814
Query 650 TCCTGGTCCTAGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATAGTGGCCCCTGGGGAGAGC 723
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||.|||||.|
Sbjct 815 TCCTGGTCCTAGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACC 888
Query 724 CTGACCCTCCAGTGTGTTTCTGATGTCAGCTACGACAGATTTGTTCTGTATAAGGAGGGAGAACGTGACTTCCT 797
|||||.||.|||||||..|||||||...|||||.||||||||||||||||||||||.||.||||||||||||||
Sbjct 889 CTGACTCTGCAGTGTGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCT 962
Query 798 CCAGCTCCCTGGCCCACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCT 871
.||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCAGCTCGCTGGCGCACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCT 1036
Query 872 ACGGGGGCCAGTACAGATGCTCCGGTGCATACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGAC 945
|||||||||||||||||||||.|||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGAC 1110
Query 946 ATCCTGATCGCAGGACAGTTCCGTGGCAGACCCTTCATCTCGGTGCATCCGGGCCCCACGGTGGCCTCAGGAGA 1019
|||||||||||||||||||||..||.||||..||.|.||||||||||.||||||||||||||||||||||||||
Sbjct 1111 ATCCTGATCGCAGGACAGTTCTATGACAGAGTCTCCCTCTCGGTGCAGCCGGGCCCCACGGTGGCCTCAGGAGA 1184
Query 1020 GAACGTGACCCTGCTGTGTCAGTCATGGGGGCCGTTCCACACTTTCCTTCTGACCAAGGCGGGAGCAGCTGATG 1093
|||||||||||||||||||||||||..|||...|.|.||.|||||||||||||||||||.|||.||||||||||
Sbjct 1185 GAACGTGACCCTGCTGTGTCAGTCACAGGGATGGATGCAAACTTTCCTTCTGACCAAGGAGGGGGCAGCTGATG 1258
Query 1094 CCCCCCTCCGTCTCAGATCAATACACGAATATCCTAAGTACCAGGCTGAATTCCCTATGAGTCCTGTGACCTCA 1167
.|||....|||||.|||||||...||.|||.||..||.|||||||||||||||||.|||.||||||||||||||
Sbjct 1259 ACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCA 1332
Query 1168 GCCCACTCGGGGACCTACAGGTGCTACGGCTCACTCAGCTCCAACCCCTACCTGCTGTCTCACCCCAGTGACTC 1241
|||||..|||||||||||||||||||||||||||..||||||||.||||||||||||.||||||||||||||.|
Sbjct 1333 GCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCTCCAAACCCTACCTGCTGACTCACCCCAGTGACCC 1406
Query 1242 CCTGGAGCTCATGGTCTCAGGAGCAGCTGAGACCCTCAGC-CCACCACAAAACAAGTCCGA-TTCCAAGGCTGG 1313
||||||||||.|||||||||||.|..|||.|..||.|||| ||.|.|| ||||.|.||.| .||||...||||
Sbjct 1407 CCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGGCCCCAGCTCCCCGAC--AACAGGCCCCACCTCCACATCTGG 1478
Query 1314 AGCAGCTAACACCCT------CAGCCCATCACAAAACAAGACTGCCTCAC--------ACCCCCAGGATTACAC 1373
|||| ||||||.|||| ||.||| |.||||||
Sbjct 1479 -----------CCCTGAGGACCAGCCCCTCAC------------CCCCACCGGGTCGGATCCCCAG-------- 1521
Query 1374 AGTGGAGAATCT-------CATCCG--------CATGGGCATAGCTGGCTTGG---------TCCTGGTGGTCC 1423
||||| ||| ||.|.| .||.||||| ||||| ||||..||.|||
Sbjct 1522 AGTGG----TCTGGGAAGGCACCTGGGGGTTGTGATCGGCAT------CTTGGTGGCCGTCATCCTACTGCTCC 1585
Query 1424 TC-----------------------------------------GGG---ATTCTGCTATTTGAGGCTCAGCACA 1453
|| ||| |..|||....|.|||.| ||||.||
Sbjct 1586 TCCTCCTCCTCCTCCTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATCGAGTC-CAGCCCA 1658
Query 1454 G----------CCAGAGAAG----CCTC---------------------------------------------- 1467
| |||| |||| ||||
Sbjct 1659 GCTGCCGATGCCCAG-GAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGG 1731
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 1732 ACACTCGGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGA 1805
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 1806 GAAATGGCCTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAG 1879
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 1880 GCAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCC 1953
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 1954 TCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACT 2027
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 2028 CTGGCCATCCACTAGCCCAGGGGGGGACGCAGACCCCACACTCCATGGAGTCTGGAATGCATGGGAGCTGCCCC 2101
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 2102 CCCAGTGGACACCATTGGACCCCACCCAGCCTGGATCTACCCCAGGAGACTCTGGGAACTTTTAGGGGTCACTC 2175
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 2176 AATTCTGCAGTATAAATAACTAATGTCTCTACAATTTTGAAATAAAGCAACAGACTTCTCAATAATCAATGAAG 2249
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 2250 TAGCTGAGAAAACTAAGTCAGAAAGTGCATTAAACTGAATCACAATGTAAATATTACACATCAAGCGATGAAAC 2323
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 2324 TGGAAAACTACAAGCCACGAATGAATGAATTAGGAAAGAAAAAAAGTAGGAAATGAATGATCTTGGCTTTCCTA 2397
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 2398 TAAGAAATTTAGGGCAGGGCACGGTGGCTCACGCCTGTAATTCCAGCACTTTGGGAGGCCGAGGCGGGCAGATC 2471
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 2472 ACGAGTTCAGGAGATCGAGACCATCTTGGCCAACATGGTGAAACCCTGTCTCTCCTAAAAATACAAAAATTAGC 2545
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 2546 TGGATGTGGTGGCAGTGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGGAGT 2619
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 2620 CAGAGGTTTCAGTGAGCCAAGATCGCACCACTGCTCTCCAGCCTGGCGACAGAGGGAGACTCCATCTCAAATTA 2693
Query 1468 ---------------------------------------- 1467
Sbjct 2694 AAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAAAAAAAA 2733
