Nucleotide Global Alignment

Description

Query:
TRCN0000476912
Subject:
XM_017026224.1
Aligned Length:
1562
Identities:
961
Gaps:
484

Alignment

Query    1  ATGACCCCCATCGTCACAGTCCTGATCTGTCTCAGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGAC  74
            ||||||||||||.||||.|||||||||||||||.|||||||||||||||||.||||||||||||||||||||..
Sbjct    1  ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCAGGACCCACGTGCAGGCAGGGCA  74

Query   75  CCTCCCCAAGCCCACACTCTGGGCTGAGCCAGGCTCTGTGATCACCCAGGGGAGTCCCGTGACCCTCTGGTGTC  148
            |||||||||||||||.||||||||||||||||||||||||||||.||||||.|||||.|||||||||.||||||
Sbjct   75  CCTCCCCAAGCCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCATCCAGGGAAGTCCTGTGACCCTCAGGTGTC  148

Query  149  AGGGGATCCTGGAGACCCAGGAGTACCGTCTGTATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCCCA  222
            ||||||.|||..||.|..|||||||||.|||.|||||.|||||.|||.|||||.|||||.|||.||||||   |
Sbjct  149  AGGGGAGCCTTCAGGCTGAGGAGTACCATCTATATAGGGAAAACAAATCAGCATCCTGGGTTAGACGGAT---A  219

Query  223  CAGGAGATTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTGT--  294
            ||.|||..||.||||||.||||||||||||||||||||||||||||||||||||.||||||||||||.||||  
Sbjct  220  CAAGAGCCTGGGAAGAATGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACGCAGGGCGGTATCACTGTCA  293

Query  295  -TTCTACGGTAGCCACACTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACA  367
             |.||||   |||||||.| ||  ||..||||||..||||||||||||||||||||||||||||||||||||||
Sbjct  294  GTACTAC---AGCCACAAT-CA--CTCATCAGAGTACAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACA  361

Query  368  TCAAACCCACCCTCTCAGCTCTACCCAGCCCTGTGGTGACCTCAGGAGGGAACGTGACCCTCCATTGTGTCTCA  441
            .|||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  362  GCAAACCCACCCTCTCAGCTCTGCCCAGCCCTGTGGTGACCTCAGGAGGGAACGTGACCCTCCAGTGTGTCTCA  435

Query  442  CAGGTGGCATTTGGCAGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCACAGCC  515
            |||||||||||||.|.|||||||||||||||||||||||||||||||||||||||||.||||||||||.||..|
Sbjct  436  CAGGTGGCATTTGACGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAACGCCTGAACTCCCATTC  509

Query  516  CCGTACCCATGGGTGGTCCCGGGCCATCTTCTCTGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTCGTACAGGT  589
            ||.|.|||.||||||||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  510  CCATGCCCGTGGGTGGTCCTGGGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTCGTACAGGT  583

Query  590  GCTATGCTTATGACTCGAACTCTCCCCATGTGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGT  663
            ||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||     
Sbjct  584  GCTATGCTTATGACTCGAACTCTCCCTATGTGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCC-----  652

Query  664  GTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATAGTGGCCCCTGGGGAGAGCCTGACCCTCCAGTG  737
                                                                                      
Sbjct  653  --------------------------------------------------------------------------  652

Query  738  TGTTTCTGATGTCAGCTACGACAGATTTGTTCTGTATAAGGAGGGAGAACGTGACTTCCTCCAGCTCCCTGGCC  811
                                                                                      
Sbjct  653  --------------------------------------------------------------------------  652

Query  812  CACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTAC  885
                                                                                      
Sbjct  653  --------------------------------------------------------------------------  652

Query  886  AGATGCTCCGGTGCATACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGG  959
                                                                                  ||||
Sbjct  653  ----------------------------------------------------------------------CAGG  656

Query  960  ACAGTTCCGTGGCAGACCCT-TCATCTCGGTGCATCCGGGCCCCACGGTGGCCTCAGGAGAGAACGTGACCCTG  1032
            |||||||..||.|||||||| || ||||||||||.||||.||||||.||.|||.|||||.||||||||||||||
Sbjct  657  ACAGTTCTATGACAGACCCTCTC-TCTCGGTGCAGCCGGTCCCCACAGTAGCCCCAGGAAAGAACGTGACCCTG  729

Query 1033  CTGTGTCAGTCATGGGGGCCGTTCCACACTTTCCTTCTGACCAAGGCGGGAGCAGCTGATGCCCCCCTCCGTCT  1106
            ||||||||||||.||||||.||||||||||||||||||||||||||.|||.||||...||.||||.||.|.|||
Sbjct  730  CTGTGTCAGTCACGGGGGCAGTTCCACACTTTCCTTCTGACCAAGGAGGGGGCAGGCCATCCCCCACTGCATCT  803

Query 1107  CAGATCAATACACGAATATCCTAAGTACCAGGCTGAATTCCCTATGAGTCCTGTGACCTCAGCCCACTCGGGGA  1180
            .||||||...|||.||..||...||.|||||||||||||||..|||.||||||||||||||||||||..|||||
Sbjct  804  GAGATCAGAGCACCAAGCTCAGCAGAACCAGGCTGAATTCCGCATGGGTCCTGTGACCTCAGCCCACGTGGGGA  877

Query 1181  CCTACAGGTGCTACGGCTCACTCAGCTCCAACCCCTACCTGCTGTCTCACCCCAGTGACTCCCTGGAGCTCATG  1254
            |||||||.||||||.|||||||||||||||||||||||||||||||||.||||||||||.|||||||||||.||
Sbjct  878  CCTACAGATGCTACAGCTCACTCAGCTCCAACCCCTACCTGCTGTCTCTCCCCAGTGACCCCCTGGAGCTCGTG  951

Query 1255  GTCTCAGGAGCAGCTGAG-ACCCTCAGCCCACCACAAAACAAGTCCGATTCCAAGGCTGGAGCAGCTAACACCC  1327
            |||||| ||||..||||| |   |.|||||..||| ..|||..|.||       ||.|             |||
Sbjct  952  GTCTCA-GAGCCCCTGAGTA---TAAGCCCTTCAC-CCACACCTGCG-------GGGT-------------CCC  1000

Query 1328  TCAGCCCATCACAAAACAAGACTGCCTCACACCCCCAGGATTACACAGTGGAGAATCTCATCCGCATGGGCATA  1401
            | .|.|||||.|||.|||||                          ||.||||                     
Sbjct 1001  T-GGGCCATCTCAAGACAAG--------------------------AGAGGAG---------------------  1026

Query 1402  GCTGGCTTGGTCCT-GGTGGTCCTCGGGATTCTG-CTAT-TTGAGGCT------CAGCACAG-------CC---  1456
            ||| ||||||.||| |||       |||| |||| ||.| .|||||||      ||.|.|||       ||   
Sbjct 1027  GCT-GCTTGGGCCTCGGT-------GGGA-TCTGACTGTGATGAGGCTGGAGTCCACCCCAGATGTGCTCCTTT  1091

Query 1457  --AGAGAAGCCTC-------------------------------------------------------------  1467
              ||||||||..|                                                             
Sbjct 1092  AGAGAGAAGCACCCCAGCTGTGGGTGCCGCTCACACTGCCCCTCCTGTGCTCACCTGGAGGCCTCTGTGCTCAG  1165

Query 1468  --------  1467
                    
Sbjct 1166  GGCATCCC  1173

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