Nucleotide Global Alignment
Description
- Query:
- TRCN0000476937
- Subject:
- NM_001286221.1
- Aligned Length:
- 1672
- Identities:
- 994
- Gaps:
- 566
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGCATCAGATGTTTATGTTTAATTGGTTTACAGACTGTCTCTGGATTCTTTTCCTGTCAAATTACAAGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTGTTGAGTCTTCAAGTCCAGGGTGAATATAAGTGTGGCCTGCTCTGTGAAAACACTTCATTGTTGATTGCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGTCAGAAGAAAAGTTTCAGGAGGCTCAGCAACATCAGAGGACCATGAGTTTGATCCATCAGCTGACATGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTCATGATTTTGATGATGAGCGAACATTAGAAGAAGAAGAAATGATGGAAGGAGAGACAAACTTCAGTTCTGA 296
Query 1 ----------------------------ATGCCAATTCATGAACTTCTCAGCCTTTATGGTTATGGTAGTACTG 46
||||||||.||.||.||.||||||||.||||||||||..||.||||
Sbjct 297 AATAGAGGATCTTGCGAGGGAAGGCGACATGCCAATCCACGAGCTGCTCAGCCTCTATGGTTATGACAGCACTG 370
Query 47 TTCGACTACCTGAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAAGAAGGTGAAGATGATGAAGATGCTGATAAT 120
||||..|||||||.||| |||||.||||||||.|||||.||.||||||||||||||||||||||||||||||
Sbjct 371 TTCGGTTACCTGAGGAA---GAGGAGGAGGAAGAGGAGGAGGAGGAAGGTGAAGATGATGAAGATGCTGATAAT 441
Query 121 GATGACAACAGTGGCTGTAGTGGGGAAAATAAAGAGGAGAATATAAAGGATTCATCAGGTCAGGAGGATGAAAC 194
|||||.|||||||||||||||||.|||||||||||.||||||||||||||||||||.|||||||||||||||||
Sbjct 442 GATGATAACAGTGGCTGTAGTGGAGAAAATAAAGAAGAGAATATAAAGGATTCATCGGGTCAGGAGGATGAAAC 515
Query 195 TCAGTCTTCCAATGATGATCCATCACAATCTGTTGCTTCTCAAGATGCCCAGGAAATAATCCGCCCACGTCGAT 268
|||||||||||||||||||||.|||||.||||||.||||.||||||||.|||||||||||||||||||||||||
Sbjct 516 TCAGTCTTCCAATGATGATCCCTCACAGTCTGTTACTTCCCAAGATGCTCAGGAAATAATCCGCCCACGTCGAT 589
Query 269 GTAAATATTTTGATACAAATAGTGAAGTAGAAGAAGAATCTGAAGAAGATGAAGATTATATTCCATCAGAAGAC 342
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 590 GTAAATATTTTGATACAAATAGTGAAATAGAAGAAGAATCTGAAGAAGATGAAGATTATATTCCCTCAGAAGAC 663
Query 343 TGGAAAAAGGAGATTATGGTGGGCTCCATGTTTCAAGCAGAAATTCCAGTTGGCATTTGTAGATACAAAGAAAA 416
|||||||||||.||.|||||||||||||||||||||||.||.|||||||||||..|||||||||||||||||||
Sbjct 664 TGGAAAAAGGAAATCATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGTTGGTGTTTGTAGATACAAAGAAAA 737
Query 417 TGAAAAAGTATATGAAAATGATGATCAGCTCCTGTGGGACCCTGAGTACTTACCAGAAGATAAAGTGATTATAT 490
|||||||||.||||||||||||||||||||.||||||||.||.||||..|||||||||||.||||||.||.|.|
Sbjct 738 TGAAAAAGTGTATGAAAATGATGATCAGCTTCTGTGGGATCCAGAGTGTTTACCAGAAGAGAAAGTGGTTGTCT 811
Query 491 TTCTTAAAGATGCATCTAGAAGAACAGGTGATGAGAAGGGTGTAGAAGCAATTCCTGAAGGATCTCACATAAAA 564
|||||||.|||||.||||||||.|||||.||||||||.|||||.||||||||.||||||||.||.||.||.|||
Sbjct 812 TTCTTAAGGATGCGTCTAGAAGGACAGGGGATGAGAAAGGTGTGGAAGCAATCCCTGAAGGCTCGCATATCAAA 885
Query 565 GACAATGAACAGGCTTTATATGAATTGGTTAAATGCAATTTTGATACAGAAGAAGCATTGAGAAGATTAAGATT 638
||||||||.||||||||||||||.|||||||||||||..||||||||.||||||||.|||||||||.|.|||||
Sbjct 886 GACAATGAGCAGGCTTTATATGAGTTGGTTAAATGCAGCTTTGATACGGAAGAAGCCTTGAGAAGACTGAGATT 959
Query 639 TAATGTAAAAGCAGCTAGAGAGGAATTATCTGTTTGGACAGAGGAAGAGTGTAGAAATTTTGAACAAGGGCTGA 712
||||||.|||||||||.|||||||.||||||||.|||||||||||||||||||||||||||||.||||||||||
Sbjct 960 TAATGTCAAAGCAGCTCGAGAGGAGTTATCTGTGTGGACAGAGGAAGAGTGTAGAAATTTTGAGCAAGGGCTGA 1033
Query 713 AGGCCTATGGAAAGGATTTTCATTTGATTCAGGCTAATAAAGTCCGAACAAGGTCAGTTGGTGAATGTGTAGCA 786
|||||||||||||.|||||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1034 AGGCCTATGGAAAAGATTTTCATCTGATTCAGGCTAATAAAGTCCGAACAAGATCAGTTGGTGAATGTGTAGCA 1107
Query 787 TTCTATTACATGTGGAAAAAATCTGAACGTTATGATTTCTTTGCTCAGCAAACACGATTTGGAAAGAAGAAATA 860
||||||||||||||||||||.|||||.||.||||||||||||||||||||||||.|.||||||||.||||||||
Sbjct 1108 TTCTATTACATGTGGAAAAAGTCTGAGCGCTATGATTTCTTTGCTCAGCAAACAAGGTTTGGAAAAAAGAAATA 1181
Query 861 TAATCTTCATCCTGGTGTAACGGATTACATGGATCGTCTTCTAGACGAAAGTGAAAGTGCTGCATCTAGTCGAG 934
||||||||||||||||||||||||||||||||||||||||.|.||.|||||||||||||||||.|||||.||||
Sbjct 1182 TAATCTTCATCCTGGTGTAACGGATTACATGGATCGTCTTTTGGATGAAAGTGAAAGTGCTGCTTCTAGCCGAG 1255
Query 935 CACCATCCCCTCCCCCAACTGCATCAAACAGTAGTAACAGCCAGTCTGAGAAAGAAGATGGCACTGTAAGCACT 1008
||||||||||.||.||.|||||.|||||.||.||||||||||||||.|||||||||||||||.||||.||||.|
Sbjct 1256 CACCATCCCCCCCTCCCACTGCCTCAAATAGCAGTAACAGCCAGTCCGAGAAAGAAGATGGCGCTGTCAGCAGT 1329
Query 1009 GCTAATCAAAATGGAGTGTCATCTAATGGACCAGG---CATACTCCA--------------------------- 1052
...|||||.||.||.||.||||||||||||||||| .|||||..|
Sbjct 1330 AGGAATCAGAACGGTGTCTCATCTAATGGACCAGGAGAAATACTAAACAAAGAAGAAGTAAAAGTTGAAGGGTT 1403
Query 1053 -------AATG--------------------------CTTCTTCCAGTTCAT------------TTTTCA---- 1077
|||| ||||||.|||.| || ||.|.|
Sbjct 1404 ACATGTTAATGGACCAACAGGTGGAAATAAGAAACCACTTCTTACAGAT-ATGGACACTAATGGTTATGAAGCA 1476
Query 1078 ---------------------------GCC---ATCAGTTCAAGA---GCCAATGCCTTT--TTAAAA------ 1110
||| ||.|.|.||||| |..||||..||| |.||||
Sbjct 1477 AATAACCTGACCACTGACCCAAAACTTGCCCATATGACTGCAAGAAATGAAAATGATTTTGATGAAAAAAATGA 1550
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1551 GAGACCTGCCAAAAGGCGGCGGATAAACAGCAGTGGGAAAGAAAGTCCGGGCTCATCTGAGTTTTTCCAGGAAG 1624
Query 1111 -------------------------------------------- 1110
Sbjct 1625 CAGTCTCACATGGGAAGTTTGAGGAACATGAAAACACGAATGAC 1668
