Nucleotide Global Alignment
Description
- Query:
- TRCN0000476937
- Subject:
- NM_027696.3
- Aligned Length:
- 1588
- Identities:
- 994
- Gaps:
- 482
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTATGTTTAATTGGTTTACAGACTGTCTCTGGATTCTTTTCCTGTCAAATTACAAGCCATCTGTTGAGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCAAGTCCAGGAGGCTCAGCAACATCAGAGGACCATGAGTTTGATCCATCAGCTGACATGCTGGTTCATGATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGATGATGAGCGAACATTAGAAGAAGAAGAAATGATGGAAGGAGAGACAAACTTCAGTTCTGAAATAGAGGAT 222
Query 1 ------------------ATGCCAATTCATGAACTTCTCAGCCTTTATGGTTATGGTAGTACTGTTCGACTACC 56
||||||||.||.||.||.||||||||.||||||||||..||.||||||||..||||
Sbjct 223 CTTGCGAGGGAAGGCGACATGCCAATCCACGAGCTGCTCAGCCTCTATGGTTATGACAGCACTGTTCGGTTACC 296
Query 57 TGAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAAGAAGGTGAAGATGATGAAGATGCTGATAATGATGACAACA 130
|||.||| |||||.||||||||.|||||.||.|||||||||||||||||||||||||||||||||||.||||
Sbjct 297 TGAGGAA---GAGGAGGAGGAAGAGGAGGAGGAGGAAGGTGAAGATGATGAAGATGCTGATAATGATGATAACA 367
Query 131 GTGGCTGTAGTGGGGAAAATAAAGAGGAGAATATAAAGGATTCATCAGGTCAGGAGGATGAAACTCAGTCTTCC 204
|||||||||||||.|||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 368 GTGGCTGTAGTGGAGAAAATAAAGAAGAGAATATAAAGGATTCATCGGGTCAGGAGGATGAAACTCAGTCTTCC 441
Query 205 AATGATGATCCATCACAATCTGTTGCTTCTCAAGATGCCCAGGAAATAATCCGCCCACGTCGATGTAAATATTT 278
|||||||||||.|||||.||||||.||||.||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 442 AATGATGATCCCTCACAGTCTGTTACTTCCCAAGATGCTCAGGAAATAATCCGCCCACGTCGATGTAAATATTT 515
Query 279 TGATACAAATAGTGAAGTAGAAGAAGAATCTGAAGAAGATGAAGATTATATTCCATCAGAAGACTGGAAAAAGG 352
||||||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 516 TGATACAAATAGTGAAATAGAAGAAGAATCTGAAGAAGATGAAGATTATATTCCCTCAGAAGACTGGAAAAAGG 589
Query 353 AGATTATGGTGGGCTCCATGTTTCAAGCAGAAATTCCAGTTGGCATTTGTAGATACAAAGAAAATGAAAAAGTA 426
|.||.|||||||||||||||||||||||.||.|||||||||||..||||||||||||||||||||||||||||.
Sbjct 590 AAATCATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGTTGGTGTTTGTAGATACAAAGAAAATGAAAAAGTG 663
Query 427 TATGAAAATGATGATCAGCTCCTGTGGGACCCTGAGTACTTACCAGAAGATAAAGTGATTATATTTCTTAAAGA 500
||||||||||||||||||||.||||||||.||.||||..|||||||||||.||||||.||.|.||||||||.||
Sbjct 664 TATGAAAATGATGATCAGCTTCTGTGGGATCCAGAGTGTTTACCAGAAGAGAAAGTGGTTGTCTTTCTTAAGGA 737
Query 501 TGCATCTAGAAGAACAGGTGATGAGAAGGGTGTAGAAGCAATTCCTGAAGGATCTCACATAAAAGACAATGAAC 574
|||.||||||||.|||||.||||||||.|||||.||||||||.||||||||.||.||.||.|||||||||||.|
Sbjct 738 TGCGTCTAGAAGGACAGGGGATGAGAAAGGTGTGGAAGCAATCCCTGAAGGCTCGCATATCAAAGACAATGAGC 811
Query 575 AGGCTTTATATGAATTGGTTAAATGCAATTTTGATACAGAAGAAGCATTGAGAAGATTAAGATTTAATGTAAAA 648
|||||||||||||.|||||||||||||..||||||||.||||||||.|||||||||.|.|||||||||||.|||
Sbjct 812 AGGCTTTATATGAGTTGGTTAAATGCAGCTTTGATACGGAAGAAGCCTTGAGAAGACTGAGATTTAATGTCAAA 885
Query 649 GCAGCTAGAGAGGAATTATCTGTTTGGACAGAGGAAGAGTGTAGAAATTTTGAACAAGGGCTGAAGGCCTATGG 722
||||||.|||||||.||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 886 GCAGCTCGAGAGGAGTTATCTGTGTGGACAGAGGAAGAGTGTAGAAATTTTGAGCAAGGGCTGAAGGCCTATGG 959
Query 723 AAAGGATTTTCATTTGATTCAGGCTAATAAAGTCCGAACAAGGTCAGTTGGTGAATGTGTAGCATTCTATTACA 796
|||.|||||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 960 AAAAGATTTTCATCTGATTCAGGCTAATAAAGTCCGAACAAGATCAGTTGGTGAATGTGTAGCATTCTATTACA 1033
Query 797 TGTGGAAAAAATCTGAACGTTATGATTTCTTTGCTCAGCAAACACGATTTGGAAAGAAGAAATATAATCTTCAT 870
||||||||||.|||||.||.||||||||||||||||||||||||.|.||||||||.||||||||||||||||||
Sbjct 1034 TGTGGAAAAAGTCTGAGCGCTATGATTTCTTTGCTCAGCAAACAAGGTTTGGAAAAAAGAAATATAATCTTCAT 1107
Query 871 CCTGGTGTAACGGATTACATGGATCGTCTTCTAGACGAAAGTGAAAGTGCTGCATCTAGTCGAGCACCATCCCC 944
||||||||||||||||||||||||||||||.|.||.|||||||||||||||||.|||||.||||||||||||||
Sbjct 1108 CCTGGTGTAACGGATTACATGGATCGTCTTTTGGATGAAAGTGAAAGTGCTGCTTCTAGCCGAGCACCATCCCC 1181
Query 945 TCCCCCAACTGCATCAAACAGTAGTAACAGCCAGTCTGAGAAAGAAGATGGCACTGTAAGCACTGCTAATCAAA 1018
.||.||.|||||.|||||.||.||||||||||||||.|||||||||||||||.||||.||||.|...|||||.|
Sbjct 1182 CCCTCCCACTGCCTCAAATAGCAGTAACAGCCAGTCCGAGAAAGAAGATGGCGCTGTCAGCAGTAGGAATCAGA 1255
Query 1019 ATGGAGTGTCATCTAATGGACCAGG---CATACTCCA----------------------------------AAT 1055
|.||.||.||||||||||||||||| .|||||..| |||
Sbjct 1256 ACGGTGTCTCATCTAATGGACCAGGAGAAATACTAAACAAAGAAGAAGTAAAAGTTGAAGGGTTACATGTTAAT 1329
Query 1056 G--------------------------CTTCTTCCAGTTCAT------------TTTTCA-------------- 1077
| ||||||.|||.| || ||.|.|
Sbjct 1330 GGACCAACAGGTGGAAATAAGAAACCACTTCTTACAGAT-ATGGACACTAATGGTTATGAAGCAAATAACCTGA 1402
Query 1078 -----------------GCC---ATCAGTTCAAGA---GCCAATGCCTTT--TTAAAA---------------- 1110
||| ||.|.|.||||| |..||||..||| |.||||
Sbjct 1403 CCACTGACCCAAAACTTGCCCATATGACTGCAAGAAATGAAAATGATTTTGATGAAAAAAATGAGAGACCTGCC 1476
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1477 AAAAGGCGGCGGATAAACAGCAGTGGGAAAGAAAGTCCGGGCTCATCTGAGTTTTTCCAGGAAGCAGTCTCACA 1550
Query 1111 ---------------------------------- 1110
Sbjct 1551 TGGGAAGTTTGAGGAACATGAAAACACGAATGAC 1584