Nucleotide Global Alignment

Description

Query:
TRCN0000476937
Subject:
NM_027696.3
Aligned Length:
1588
Identities:
994
Gaps:
482

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTTATGTTTAATTGGTTTACAGACTGTCTCTGGATTCTTTTCCTGTCAAATTACAAGCCATCTGTTGAGTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCAAGTCCAGGAGGCTCAGCAACATCAGAGGACCATGAGTTTGATCCATCAGCTGACATGCTGGTTCATGATT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGATGATGAGCGAACATTAGAAGAAGAAGAAATGATGGAAGGAGAGACAAACTTCAGTTCTGAAATAGAGGAT  222

Query    1  ------------------ATGCCAATTCATGAACTTCTCAGCCTTTATGGTTATGGTAGTACTGTTCGACTACC  56
                              ||||||||.||.||.||.||||||||.||||||||||..||.||||||||..||||
Sbjct  223  CTTGCGAGGGAAGGCGACATGCCAATCCACGAGCTGCTCAGCCTCTATGGTTATGACAGCACTGTTCGGTTACC  296

Query   57  TGAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAAGAAGGTGAAGATGATGAAGATGCTGATAATGATGACAACA  130
            |||.|||   |||||.||||||||.|||||.||.|||||||||||||||||||||||||||||||||||.||||
Sbjct  297  TGAGGAA---GAGGAGGAGGAAGAGGAGGAGGAGGAAGGTGAAGATGATGAAGATGCTGATAATGATGATAACA  367

Query  131  GTGGCTGTAGTGGGGAAAATAAAGAGGAGAATATAAAGGATTCATCAGGTCAGGAGGATGAAACTCAGTCTTCC  204
            |||||||||||||.|||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  368  GTGGCTGTAGTGGAGAAAATAAAGAAGAGAATATAAAGGATTCATCGGGTCAGGAGGATGAAACTCAGTCTTCC  441

Query  205  AATGATGATCCATCACAATCTGTTGCTTCTCAAGATGCCCAGGAAATAATCCGCCCACGTCGATGTAAATATTT  278
            |||||||||||.|||||.||||||.||||.||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  442  AATGATGATCCCTCACAGTCTGTTACTTCCCAAGATGCTCAGGAAATAATCCGCCCACGTCGATGTAAATATTT  515

Query  279  TGATACAAATAGTGAAGTAGAAGAAGAATCTGAAGAAGATGAAGATTATATTCCATCAGAAGACTGGAAAAAGG  352
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct  516  TGATACAAATAGTGAAATAGAAGAAGAATCTGAAGAAGATGAAGATTATATTCCCTCAGAAGACTGGAAAAAGG  589

Query  353  AGATTATGGTGGGCTCCATGTTTCAAGCAGAAATTCCAGTTGGCATTTGTAGATACAAAGAAAATGAAAAAGTA  426
            |.||.|||||||||||||||||||||||.||.|||||||||||..||||||||||||||||||||||||||||.
Sbjct  590  AAATCATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGTTGGTGTTTGTAGATACAAAGAAAATGAAAAAGTG  663

Query  427  TATGAAAATGATGATCAGCTCCTGTGGGACCCTGAGTACTTACCAGAAGATAAAGTGATTATATTTCTTAAAGA  500
            ||||||||||||||||||||.||||||||.||.||||..|||||||||||.||||||.||.|.||||||||.||
Sbjct  664  TATGAAAATGATGATCAGCTTCTGTGGGATCCAGAGTGTTTACCAGAAGAGAAAGTGGTTGTCTTTCTTAAGGA  737

Query  501  TGCATCTAGAAGAACAGGTGATGAGAAGGGTGTAGAAGCAATTCCTGAAGGATCTCACATAAAAGACAATGAAC  574
            |||.||||||||.|||||.||||||||.|||||.||||||||.||||||||.||.||.||.|||||||||||.|
Sbjct  738  TGCGTCTAGAAGGACAGGGGATGAGAAAGGTGTGGAAGCAATCCCTGAAGGCTCGCATATCAAAGACAATGAGC  811

Query  575  AGGCTTTATATGAATTGGTTAAATGCAATTTTGATACAGAAGAAGCATTGAGAAGATTAAGATTTAATGTAAAA  648
            |||||||||||||.|||||||||||||..||||||||.||||||||.|||||||||.|.|||||||||||.|||
Sbjct  812  AGGCTTTATATGAGTTGGTTAAATGCAGCTTTGATACGGAAGAAGCCTTGAGAAGACTGAGATTTAATGTCAAA  885

Query  649  GCAGCTAGAGAGGAATTATCTGTTTGGACAGAGGAAGAGTGTAGAAATTTTGAACAAGGGCTGAAGGCCTATGG  722
            ||||||.|||||||.||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  886  GCAGCTCGAGAGGAGTTATCTGTGTGGACAGAGGAAGAGTGTAGAAATTTTGAGCAAGGGCTGAAGGCCTATGG  959

Query  723  AAAGGATTTTCATTTGATTCAGGCTAATAAAGTCCGAACAAGGTCAGTTGGTGAATGTGTAGCATTCTATTACA  796
            |||.|||||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  960  AAAAGATTTTCATCTGATTCAGGCTAATAAAGTCCGAACAAGATCAGTTGGTGAATGTGTAGCATTCTATTACA  1033

Query  797  TGTGGAAAAAATCTGAACGTTATGATTTCTTTGCTCAGCAAACACGATTTGGAAAGAAGAAATATAATCTTCAT  870
            ||||||||||.|||||.||.||||||||||||||||||||||||.|.||||||||.||||||||||||||||||
Sbjct 1034  TGTGGAAAAAGTCTGAGCGCTATGATTTCTTTGCTCAGCAAACAAGGTTTGGAAAAAAGAAATATAATCTTCAT  1107

Query  871  CCTGGTGTAACGGATTACATGGATCGTCTTCTAGACGAAAGTGAAAGTGCTGCATCTAGTCGAGCACCATCCCC  944
            ||||||||||||||||||||||||||||||.|.||.|||||||||||||||||.|||||.||||||||||||||
Sbjct 1108  CCTGGTGTAACGGATTACATGGATCGTCTTTTGGATGAAAGTGAAAGTGCTGCTTCTAGCCGAGCACCATCCCC  1181

Query  945  TCCCCCAACTGCATCAAACAGTAGTAACAGCCAGTCTGAGAAAGAAGATGGCACTGTAAGCACTGCTAATCAAA  1018
            .||.||.|||||.|||||.||.||||||||||||||.|||||||||||||||.||||.||||.|...|||||.|
Sbjct 1182  CCCTCCCACTGCCTCAAATAGCAGTAACAGCCAGTCCGAGAAAGAAGATGGCGCTGTCAGCAGTAGGAATCAGA  1255

Query 1019  ATGGAGTGTCATCTAATGGACCAGG---CATACTCCA----------------------------------AAT  1055
            |.||.||.|||||||||||||||||   .|||||..|                                  |||
Sbjct 1256  ACGGTGTCTCATCTAATGGACCAGGAGAAATACTAAACAAAGAAGAAGTAAAAGTTGAAGGGTTACATGTTAAT  1329

Query 1056  G--------------------------CTTCTTCCAGTTCAT------------TTTTCA--------------  1077
            |                          ||||||.|||.| ||            ||.|.|              
Sbjct 1330  GGACCAACAGGTGGAAATAAGAAACCACTTCTTACAGAT-ATGGACACTAATGGTTATGAAGCAAATAACCTGA  1402

Query 1078  -----------------GCC---ATCAGTTCAAGA---GCCAATGCCTTT--TTAAAA----------------  1110
                             |||   ||.|.|.|||||   |..||||..|||  |.||||                
Sbjct 1403  CCACTGACCCAAAACTTGCCCATATGACTGCAAGAAATGAAAATGATTTTGATGAAAAAAATGAGAGACCTGCC  1476

Query 1111  --------------------------------------------------------------------------  1110
                                                                                      
Sbjct 1477  AAAAGGCGGCGGATAAACAGCAGTGGGAAAGAAAGTCCGGGCTCATCTGAGTTTTTCCAGGAAGCAGTCTCACA  1550

Query 1111  ----------------------------------  1110
                                              
Sbjct 1551  TGGGAAGTTTGAGGAACATGAAAACACGAATGAC  1584