Nucleotide Global Alignment
Description
- Query:
- TRCN0000476974
- Subject:
- XM_006715689.4
- Aligned Length:
- 3676
- Identities:
- 2057
- Gaps:
- 1592
Alignment
Query 1 ATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAAAGGTCCT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAAAGGTCCT 74
Query 75 CCAAAAGCTGGGGAAAGCTGATGAGACAAAAGACGAACAGTTCGAAGAATATGTCCAGAACTTCAAACGGCAAG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCAAAAGCTGGGGAAAGCTGATGAGACAAAAGACGAACAGTTCGAAGAATATGTCCAGAACTTCAAACGGCAAG 148
Query 149 AAGCAGAGGGTACCAGACTTCAGCGAGAACTCCGAGGATATTTAGCAGCAATCAAAGGCATGCAGGAGGCCTCC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AAGCAGAGGGTACCAGACTTCAGCGAGAACTCCGAGGATATTTAGCAGCAATCAAAGGCATGCAGGAGGCCTCC 222
Query 223 ATGAAGCTCACAGAGTCGCTGCATGAAGTCTATGAGCCTGACTGGTATGGGCGGGAAGATGTGAAAATGGTTGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATGAAGCTCACAGAGTCGCTGCATGAAGTCTATGAGCCTGACTGGTATGGGCGGGAAGATGTGAAAATGGTTGG 296
Query 297 TGAGAAATGTGATGTGCTGTGGGAAGACTTCCATCAAAAACTCGTGGATGGGTCCTTGCTAACACTGGATACCT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGAGAAATGTGATGTGCTGTGGGAAGACTTCCATCAAAAACTCGTGGATGGGTCCTTGCTAACACTGGATACCT 370
Query 371 ACCTGGGGCAATTTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGGACTATGACAGTGCC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCTGGGGCAATTTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGGACTATGACAGTGCC 444
Query 445 CGCCACCATCTGGAAGCTCTGCAGAGCTCCAAGAGGAAGGATGAGAGTCGAATCTCTAAGGCAGAAGAAGAATT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGCCACCATCTGGAAGCTCTGCAGAGCTCCAAGAGGAAGGATGAGAGTCGAATCTCTAAGGCAGAAGAAGAATT 518
Query 519 TCAGAAAGCACAGAAAGTGTTTGAAGAGTTTAACGTTGACTTACAAGAAGAGTTACCATCATTATGGTCAAGAC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCAGAAAGCACAGAAAGTGTTTGAAGAGTTTAACGTTGACTTACAAGAAGAGTTACCATCATTATGGTCAAGAC 592
Query 593 GAGTTGGATTTTATGTTAATACTTTCAAAAACGTCTCCAGCCTTGAAGCCAAGTTTCATAAGGAAATTGCGGTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGTTGGATTTTATGTTAATACTTTCAAAAACGTCTCCAGCCTTGAAGCCAAGTTTCATAAGGAAATTGCGGTG 666
Query 667 CTTTGCCACAAACTGTATGAAGTGATGACAAAACTGGGTGACCAGCACGCCGACAAGGCCTTCACCATCCAAGG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTTTGCCACAAACTGTATGAAGTGATGACAAAACTGGGTGACCAGCACGCCGACAAGGCCTTCACCATCCAAGG 740
Query 741 AGCGCCCAGTGATTCGGGTCCTCTCCGCATTGCAAAGACACCATCACCGCCTGAGGAGCCTTCACCCCTCCCGA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCGCCCAGTGATTCGGGTCCTCTCCGCATTGCAAAGACACCATCACCGCCTGAGGAGCCTTCACCCCTCCCGA 814
Query 815 GCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCCTCGGTCACCTTCACAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCCTCGGTCACCTTCACAG 888
Query 889 ACAAGGAAAGGGCCTCCTGTCCCACCTCTACCTAAAGTCACCCCGACAAAGGAACTGCAGCAGGAGAACATCAT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACAAGGAAAGGGCCTCCTGTCCCACCTCTACCTAAAGTCACCCCGACAAAGGAACTGCAGCAGGAGAACATCAT 962
Query 963 CAGTTTCTTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACAACACCTTCCCAGAATGAAGTCCCTGAGGTGA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAGTTTCTTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACAACACCTTCCCAGAATGAAGTCCCTGAGGTGA 1036
Query 1037 AGAAAGAGGAGACTTTGCTGGATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACCTGCAGGTTCTGCTGGA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGAAAGAGGAGACTTTGCTGGATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACCTGCAGGTTCTGCTGGA 1110
Query 1111 GTGACCCACTCACCCATGTCTCAGACATTGCCCTGGGACCTATGGACGAC-----------AA----------- 1162
|||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1111 GTGACCCACTCACCCATGTCTCAGACATTGCCCTGGGACCTATGGACGACTGACTCTTCAGAAAGTCTTTCCTT 1184
Query 1163 -------------------------------------------------------------------------- 1162
Sbjct 1185 GTGTAACCTGATCATGGAGGAAACTCCAGACAGTGGGTTGGCCGAAGAAATTCAAAGATCTCAAAATGATATAG 1258
Query 1163 ---------------GCACTGA-------------------------------------------TTTGG---- 1174
||.|||| |||||
Sbjct 1259 GTGCATTTACTTGGGGCCCTGACGCTAGTACAGACAGGGTCAGCCAAGAAGTTACCTCAGGTGGGTTTGGAGAA 1332
Query 1175 ----------------------------------TA-----------CAGCCGGCT----TCTGGTG------- 1192
|| |||||.||| ||||.||
Sbjct 1333 GACTCTGCATGTCCCTCCGAAACAGAGCAAGACATAAGATTATCCACCAGCCTGCTTTCGTCTGCTGACTGGCC 1406
Query 1193 -------------------------------------------------------------------------- 1192
Sbjct 1407 CACTGTAGCTGAAGAGAGTGAGCATGCCCCGGGGCCAGCCTTTCCAGGTGGAAATGAACAACTGCCCCCAAAGC 1480
Query 1193 -----------------GTT--CATT---------------------------TAATG--------GATTCACA 1212
||| |||| | ||| ||.|||.|
Sbjct 1481 CTGCGCCGGAGGCTGGAGTTGCCATTGCTGCTTGTGTGGAGATGGAGCAGCTGT-ATGACCCACTTGACTCAGA 1553
Query 1213 CA-GCC--CCA-GGATAC----------TTCA-------TTAT------------------------------- 1234
|| ||| ||| |||.|| |||| |.||
Sbjct 1554 CATGCCAGCCATGGACACAGCTGGCCTGTTCAAAGAAAGTCATGAAGATATGAAGAAGTCAGATGAAGAGGAAG 1627
Query 1235 ----------------------------------------------TCACAATGCAGAC--------------- 1247
|||.||.|.||||
Sbjct 1628 AGAAACAGAAGATGGAAGATTCTCTGTGGGCAGGTGTGGAGGCGTGTCAAAAGGTAGACACTGGAGCTATTGAT 1701
Query 1248 ----AGAC---------------------------------------------------CAGAGT--------- 1257
|||| ||||||
Sbjct 1702 ATCAAGACACTAGAAGGTACAGAGGAATTTGAAGAGAAAGCATGTGAAAGGACAGGAAACAGAGTGGTAGAACT 1775
Query 1258 --------------------------------------------------------------ATGATCT----G 1265
|.||||| |
Sbjct 1776 TCTTAATACCATAGGAAAGGAAGACCATAAGACCTTAAAAATTAATGAAGTGGAAACTAGAAAAGATCTAAGAG 1849
Query 1266 C---------------------------------------------AACT------------------------ 1270
| ||||
Sbjct 1850 CAGGGTATAAGGAAAGTACAAACGCCAATGAAAATTATTTTGAGAAAACTGACCTATTAGAAAAGGACATGGAA 1923
Query 1271 ----------TGGC------------------------------------------------------------ 1274
||||
Sbjct 1924 GGAGGAGATATGGCAAAAGAACTTAGTGACAGAGACCAAGGTCTACATGATGGAATTCAAAAGGTAATCAATAA 1997
Query 1275 -----------------------------------------------------TGAATC--------------- 1280
||||||
Sbjct 1998 TTGTGGAATGATAGAAGGCTTTGGAGCCAAACCTGCCAATCACCCAGATATCTTGAATCCATCTCTCCAGACCT 2071
Query 1281 ----------------TGAACAGG-------------------------------------------------- 1288
||||.|.|
Sbjct 2072 ACTCTGTATCTAATATTGAAGATGGCAGCCCTGAGGGATGGGATTTGACTAGAAAAGACATAAAGAAAAATGCA 2145
Query 1289 -------CTCC--------------------ACCC-------------ACAGA--------------------- 1301
|||| |||| |||||
Sbjct 2146 ATAGACACTCCCAACCATGATATGATATTTTACCCAGCACAAGACAGTACAGATGCTGAAGAAATTCAGTGTGA 2219
Query 1302 -------------------------------------------------------------------------- 1301
Sbjct 2220 GACTGTGTTAAATGCTCTTGTAGGTGACAGGGATAAAAATCAGGCTGTTTTATCAATAAAACTTGAAGTAGAAG 2293
Query 1302 -------------------------------------------------------------------------- 1301
Sbjct 2294 CTCAGTCTAGGACTGACCTTAATTATTCTCTGGGAAGAGATGCAAACAGAAGAGATTTATGTTCATGTAAGGCA 2367
Query 1302 -----------------------------------------------------------------GCCAAAA-- 1308
|||||.|
Sbjct 2368 GAAAGTTCACTAATAGAAGGGTCTGAAAGAACAGTAACTGAGAACCGTAGTCATACTGTTAACTTGCCAAGAAT 2441
Query 1309 -GCAGAG------------------GAGCC--------TCTGGCTGC--------------------------- 1328
|||||| ||.|| ||||||.||
Sbjct 2442 TGCAGAGATAGACTCTTGGGGAACAGATCCAGGTCAAATCTGGCAGCCAAGCTTGGATTCAGCAATGAATAATT 2515
Query 1329 --------------------------------------------------------TGTC-------------- 1332
||||
Sbjct 2516 TGGATATAACAGGATTCTCTGGTATACCAGATGGCCAAGCAAGTGGATTTGCCAGTTGTCTGGATTCTATTAAC 2589
Query 1333 ------------------------------------------ACAC---------------------------- 1336
||||
Sbjct 2590 CACTGGCCTATCAGAGATACAGAAGGCTTAGATAATAGCTGGACACATTCAGATGTAGTTGAGCACAAGGAAGA 2663
Query 1337 -CTGCCGTTGGTCT------------------------------------------------------------ 1349
|||..|.|||.||
Sbjct 2664 ACTGAAGGTGGACTTACTAGCAGGTGATTGTAGGGAACAAGCCATTGCTAGCTGCTGGGAACAAAGCCAGGAGA 2737
Query 1350 ---------------------GGACCT--TGGAATG-----------------------------GAC------ 1365
|||||| ||||||| |||
Sbjct 2738 TAGCAAGACCATTGATTTTGGGGACCTCCTGGAATGCTAGCACTGAGAGTTCTGCTAGTTCCCGAGACCAGGAC 2811
Query 1366 -------ACTCGG-----GCTGAGG-----------AGCCAG-----TGGA-----------------GGAGGC 1394
||||.| .||||.| |.|||| |||| .|||||
Sbjct 2812 ATCAACAACTCAGATTTATCTGAAGATGAAATTGCTAACCAGAGATATGGATTGTTGTACCAAGAAATAGAGGC 2885
Query 1395 AG------------------------------------------------------------------------ 1396
.|
Sbjct 2886 TGACAAAGACGAGGCTTCTGGTGGTTCATTTAATGGATTCACACAGCCCCAGGATACTTCATTATTCACAATGC 2959
Query 1397 ---------------------------TGATCATACCTGGAGCTGATGCTGATGCAGCTGTTGGAACCTTGGTG 1443
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2960 AGACAGACCAGAGTATGATCTGCAACTTGATCATACCTGGAGCTGATGCTGATGCAGCTGTTGGAACCTTGGTG 3033
Query 1444 TCAGCAGCTGAGGGGGCCCCAGGAGAGGAAGCAGAGGCGGAGACGGCCACTGTCCCTGCCGGGGAAGGAGTAAG 1517
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 3034 TCAGCAGCTGAGGGGGCCCCAGGAGAGGAAGCAGAGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAAG 3107
Query 1518 TTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCG 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3108 TTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCG 3181
Query 1592 AAGCAACAGTGCCTCAGGAGAAGGTCATTCCTTCGGTGGTCATAGAGCCTGCCTCCAACCATGAAGAGGAAGGA 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3182 AAGCAACAGTGCCTCAGGAGAAGGTCATTCCTTCGGTGGTCATAGAGCCTGCCTCCAACCATGAAGAGGAAGGA 3255
Query 1666 GAAAACGAAATAACTATAGGTGCAGAGCCCAAGGAGACCACCGAGGACGCGGCTCCTCCGGGCCCCACCAGCGA 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3256 GAAAACGAAATAACTATAGGTGCAGAGCCCAAGGAGACCACCGAGGACGCGGCTCCTCCGGGCCCCACCAGCGA 3329
Query 1740 GACACCGGAGCTGGCTACGGAGCAGAAGCCTATCCAGGACCCTCAGCCCACGCCTTCTGCACCAGCCATGGGGG 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3330 GACACCGGAGCTGGCTACGGAGCAGAAGCCTATCCAGGACCCTCAGCCCACGCCTTCTGCACCAGCCATGGGGG 3403
Query 1814 CTGCTGACCAGCTAGCATCTGCAAGGGAGGCCTCTCAGGAATTGCCTCCTGGCTTTCTCTACAAGGTGGAAACA 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3404 CTGCTGACCAGCTAGCATCTGCAAGGGAGGCCTCTCAGGAATTGCCTCCTGGCTTTCTCTACAAGGTGGAAACA 3477
Query 1888 CTGCATGATTTTGAGGCAGCAAATTCTGATGAACTTACCTTACAAAGGGGTGATGTGGTGCTGGTGGTCCCCTC 1961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3478 CTGCATGATTTTGAGGCAGCAAATTCTGATGAACTTACCTTACAAAGGGGTGATGTGGTGCTGGTGGTCCCCTC 3551
Query 1962 AGATTCAGAAGCTGATCAGGATGCAGGCTGGCTGGTGGGAGTGAAGGAATCAGACTGGCTTCAGTACAGAGACC 2035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3552 AGATTCAGAAGCTGATCAGGATGCAGGCTGGCTGGTGGGAGTGAAGGAATCAGACTGGCTTCAGTACAGAGACC 3625
Query 2036 TTGCCACCTACAAAGGCCTCTTTCCAGAGAACTTCACCCGACGCTTAGAT 2085
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3626 TTGCCACCTACAAAGGCCTCTTTCCAGAGAACTTCACCCGACGCTTAGAT 3675