Nucleotide Global Alignment

Description

• Query: TRCN0000476974
• Subject: XM_017011995.2
• Aligned Length: 3801
• Identities: 2083
• Gaps: 1716

Alignment

Query    1  ATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAAAGGTCCT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAAAGGTCCT  74

Query   75  CCAAAAGCTGGGGAAAGCTGATGAGACAAAAGACGAACAGTTCGAAGAATATGTCCAGAACTTCAAACGGCAAG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCAAAAGCTGGGGAAAGCTGATGAGACAAAAGACGAACAGTTCGAAGAATATGTCCAGAACTTCAAACGGCAAG  148

Query  149  AAGCAGAGGGTACCAGACTTCAGCGAGAACTCCGAGGATATTTAGCAGCAATCAAAGGCATGCAGGAGGCCTCC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AAGCAGAGGGTACCAGACTTCAGCGAGAACTCCGAGGATATTTAGCAGCAATCAAAGGCATGCAGGAGGCCTCC  222

Query  223  ATGAAGCTCACAGAGTCGCTGCATGAAGTCTATGAGCCTGACTGGTATGGGCGGGAAGATGTGAAAATGGTTGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATGAAGCTCACAGAGTCGCTGCATGAAGTCTATGAGCCTGACTGGTATGGGCGGGAAGATGTGAAAATGGTTGG  296

Query  297  TGAGAAATGTGATGTGCTGTGGGAAGACTTCCATCAAAAACTCGTGGATGGGTCCTTGCTAACACTGGATACCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGAGAAATGTGATGTGCTGTGGGAAGACTTCCATCAAAAACTCGTGGATGGGTCCTTGCTAACACTGGATACCT  370

Query  371  ACCTGGGGCAATTTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGGACTATGACAGTGCC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACCTGGGGCAATTTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGGACTATGACAGTGCC  444

Query  445  CGCCACCATCTGGAAGCTCTGCAGAGCTCCAAGAGGAAGGATGAGAGTCGAATCTCTAAGGCAGAAGAAGAATT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CGCCACCATCTGGAAGCTCTGCAGAGCTCCAAGAGGAAGGATGAGAGTCGAATCTCTAAGGCAGAAGAAGAATT  518

Query  519  TCAGAAAGCACAGAAAGTGTTTGAAGAGTTTAACGTTGACTTACAAGAAGAGTTACCATCATTATGGTCAAGAC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCAGAAAGCACAGAAAGTGTTTGAAGAGTTTAACGTTGACTTACAAGAAGAGTTACCATCATTATGGTCAAGAC  592

Query  593  GAGTTGGATTTTATGTTAATACTTTCAAAAACGTCTCCAGCCTTGAAGCCAAGTTTCATAAGGAAATTGCGGTG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAGTTGGATTTTATGTTAATACTTTCAAAAACGTCTCCAGCCTTGAAGCCAAGTTTCATAAGGAAATTGCGGTG  666

Query  667  CTTTGCCACAAACTGTATGAAGTGATGACAAAACTGGGTGACCAGCACGCCGACAAGGCCTTCACCATCCAAGG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTTTGCCACAAACTGTATGAAGTGATGACAAAACTGGGTGACCAGCACGCCGACAAGGCCTTCACCATCCAAGG  740

Query  741  AGCGCCCAGTGATTCGGGTCCTCTCCGCATTGCAAAGACACCATCACCGCCTGAGGAGCCTTCACCCCTCCCGA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGCGCCCAGTGATTCGGGTCCTCTCCGCATTGCAAAGACACCATCACCGCCTGAGGAGCCTTCACCCCTCCCGA  814

Query  815  GCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCCTCGGTCACCTTCACAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCCTCGGTCACCTTCACAG  888

Query  889  ACAAGGAAAGGGCCTCCTGTCCCACCTCTACCTAAAGTCACCCCGACAAAGGAACTGCAGCAGGAGAACATCAT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ACAAGGAAAGGGCCTCCTGTCCCACCTCTACCTAAAGTCACCCCGACAAAGGAACTGCAGCAGGAGAACATCAT  962

Query  963  CAGTTTCTTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACAACACCTTCCCAGAATGAAGTCCCTGAGGTGA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CAGTTTCTTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACAACACCTTCCCAGAATGAAGTCCCTGAGGTGA  1036

Query 1037  AGAAAGAGGAGACTTTGCTGGATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACCTGCAGGTTCTGCTGGA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGAAAGAGGAGACTTTGCTGGATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACCTGCAGGTTCTGCTGGA  1110

Query 1111  GTGACCCACTCACCCATGTCTCAGACATTGCCCTGGGACCTATGGACGAC------------------------  1160
            ||||||||||||||||||||||||||||||||||||||||||||||||||                        
Sbjct 1111  GTGACCCACTCACCCATGTCTCAGACATTGCCCTGGGACCTATGGACGACTGACTCTTCAGAAAGTCTTTCCTT  1184

Query 1161  --------------------------------------------------------------------------  1160
                                                                                      
Sbjct 1185  GTGTAACCTGATCATGGAGGAAACTCCAGACAGTGGGTTGGCCGAAGAAATTCAAAGATCTCAAAATGATATAG  1258

Query 1161  --------------------------------------------------------------------------  1160
                                                                                      
Sbjct 1259  GTGCATTTACTTGGGGCCCTGACGCTAGTACAGACAGGGTCAGCCAAGAAGTTACCTCAGGTGGGTTTGGAGAA  1332

Query 1161  --------------------------------------------------------------------------  1160
                                                                                      
Sbjct 1333  GACTCTGCATGTCCCTCCGAAACAGAGCAAGACATAAGATTATCCACCAGCCTGCTTTCGTCTGCTGACTGGCC  1406

Query 1161  --------------------------------------------------------------------------  1160
                                                                                      
Sbjct 1407  CACTGTAGCTGAAGAGAGTGAGCATGCCCCGGGGCCAGCCTTTCCAGGTGGAAATGAACAACTGCCCCCAAAGC  1480

Query 1161  --------------------------------------------------------------------------  1160
                                                                                      
Sbjct 1481  CTGCGCCGGAGGCTGGAGTTGCCATTGCTGCTTGTGTGGAGATGGAGCAGCTGTATGACCCACTTGACTCAGAC  1554

Query 1161  --------------------------------------------------------------------------  1160
                                                                                      
Sbjct 1555  ATGCCAGCCATGGACACAGCTGGCCTGTTCAAAGAAAGTCATGAAGATATGAAGAAGTCAGATGAAGAGGAAGA  1628

Query 1161  --------------------------------------------------------------------------  1160
                                                                                      
Sbjct 1629  GAAACAGAAGATGGAAGATTCTCTGTGGGCAGGTGTGGAGGCGTGTCAAAAGGTAGACACTGGAGCTATTGATA  1702

Query 1161  --------------------------------------------------------------------------  1160
                                                                                      
Sbjct 1703  TCAAGACACTAGAAGGTACAGAGGAATTTGAAGAGAAAGCATGTGAAAGGACAGGAAACAGAGTGGTAGAACTT  1776

Query 1161  --------------------------------------------------------------------------  1160
                                                                                      
Sbjct 1777  CTTAATACCATAGGAAAGGAAGACCATAAGACCTTAAAAATTAATGAAGTGGAAACTAGAAAAGATCTAAGAGC  1850

Query 1161  --------------------------------------------------------------------------  1160
                                                                                      
Sbjct 1851  AGGGTATAAGGAAAGTACAAACGCCAATGAAAATTATTTTGAGAAAACTGACCTATTAGAAAAGGACATGGAAG  1924

Query 1161  ---------------AAGCACT----------------------------------------------------  1167
                           |||.|||                                                    
Sbjct 1925  GAGGAGATATGGCAAAAGAACTTAGTGACAGAGACCAAGGTCTACATGATGGAATTCAAAAGGTAATCAATAAT  1998

Query 1168  --------------------------------------------------------------------------  1167
                                                                                      
Sbjct 1999  TGTGGAATGATAGAAGGCTTTGGAGCCAAACCTGCCAATCACCCAGATATCTTGAATCCATCTCTCCAGACCTA  2072

Query 1168  ----------------------------------------GATTTG----------------------------  1173
                                                    ||||||                            
Sbjct 2073  CTCTGTATCTAATATTGAAGATGGCAGCCCTGAGGGATGGGATTTGACTAGAAAAGACATAAAGAAAAATGCAA  2146

Query 1174  ---------------------------------------------GTACAG-----------------------  1179
                                                         ||||||                       
Sbjct 2147  TAGACACTCCCAACCATGATATGATATTTTACCCAGCACAAGACAGTACAGATGCTGAAGAAATTCAGTGTGAG  2220

Query 1180  --------------------------------------------------------------------------  1179
                                                                                      
Sbjct 2221  ACTGTGTTAAATGCTCTTGTAGGTGACAGGGATAAAAATCAGGCTGTTTTATCAATAAAACTTGAAGTAGAAGC  2294

Query 1180  ---------------CC---------------------------------------------------------  1181
                           ||                                                         
Sbjct 2295  TCAGTCTAGGACTGACCTTAATTATTCTCTGGGAAGAGATGCAAACAGAAGAGATTTATGTTCATGTAAGGCAG  2368

Query 1182  --------------------------------------------------------------------------  1181
                                                                                      
Sbjct 2369  AAAGTTCACTAATAGAAGGGTCTGAAAGAACAGTAACTGAGAACCGTAGTCATACTGTTAACTTGCCAAGAATT  2442

Query 1182  --------------------------------------------------------------------------  1181
                                                                                      
Sbjct 2443  GCAGAGATAGACTCTTGGGGAACAGATCCAGGTCAAATCTGGCAGCCAAGCTTGGATTCAGCAATGAATAATTT  2516

Query 1182  --------------------------------------------------------------------------  1181
                                                                                      
Sbjct 2517  GGATATAACAGGATTCTCTGGTATACCAGATGGCCAAGCAAGTGGATTTGCCAGTTGTCTGGATTCTATTAACC  2590

Query 1182  --------------------------------------------------------------------------  1181
                                                                                      
Sbjct 2591  ACTGGCCTATCAGAGATACAGAAGGCTTAGATAATAGCTGGACACATTCAGATGTAGTTGAGCACAAGGAAGAA  2664

Query 1182  --------------------------------------------------------------------------  1181
                                                                                      
Sbjct 2665  CTGAAGGTGGACTTACTAGCAGGTGATTGTAGGGAACAAGCCATTGCTAGCTGCTGGGAACAAAGCCAGGAGAT  2738

Query 1182  --------------------------------------------------------------------------  1181
                                                                                      
Sbjct 2739  AGCAAGACCATTGATTTTGGGGACCTCCTGGAATGCTAGCACTGAGAGTTCTGCTAGTTCCCGAGACCAGGACA  2812

Query 1182  --------------------------------------------------------------------------  1181
                                                                                      
Sbjct 2813  TCAACAACTCAGATTTATCTGAAGATGAAATTGCTAACCAGAGATATGGATTGTTGTACCAAGAAATAGAGGCT  2886

Query 1182  -----------GGCTTCTGGTGGTTCATTTAATGGATTCACACAGCCCCAGGATACTTCATTATTCACAATGCA  1244
                       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887  GACAAAGACGAGGCTTCTGGTGGTTCATTTAATGGATTCACACAGCCCCAGGATACTTCATTATTCACAATGCA  2960

Query 1245  GACAGACCAGAGTATGATCTGCAACTTGGCTGAATCTGAACAGGCTCCACCCACAGAGCCAAAAGCAGAGGAGC  1318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961  GACAGACCAGAGTATGATCTGCAACTTGGCTGAATCTGAACAGGCTCCACCCACAGAGCCAAAAGCAGAGGAGC  3034

Query 1319  CTCTGGCTGCTGTCACACCTGCCGTTGGTCTGGACCTTGGAATGGACACTCGGGCTGAGGAGCCAGTGGAGGAG  1392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035  CTCTGGCTGCTGTCACACCTGCCGTTGGTCTGGACCTTGGAATGGACACTCGGGCTGAGGAGCCAGTGGAGGAG  3108

Query 1393  GCAGTGATCATACCTGGAGCTGATGCTGATGCAGCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCCCCAGG  1466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109  GCAGTGATCATACCTGGAGCTGATGCTGATGCAGCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCCCCAGG  3182

Query 1467  AGAGGAAGCAGAGGCGGAGACGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAATTGGAA  1540
            ||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183  AGAGGAAGCAGAGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAATTGGAA  3256

Query 1541  CTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGAAG  1614
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257  CTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGAAG  3330

Query 1615  GTCATTCCTTCGGTGGTCATAGAGCCTGCCTCCAACCATGAAGAGGAAGGAGAAAACGAAATAACTATAGGTGC  1688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331  GTCATTCCTTCGGTGGTCATAGAGCCTGCCTCCAACCATGAAGAGGAAGGAGAAAACGAAATAACTATAGGTGC  3404

Query 1689  AGAGCCCAAGGAGACCACCGAGGACGCGGCTCCTCCGGGCCCCACCAGCGAGACACCGGAGCTGGCTACGGAGC  1762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405  AGAGCCCAAGGAGACCACCGAGGACGCGGCTCCTCCGGGCCCCACCAGCGAGACACCGGAGCTGGCTACGGAGC  3478

Query 1763  AGAAGCCTATCCAGGACCCTCAGCCCACGCCTTCTGCACCAGCCATGGGGGCTGCTGACCAGCTAGCATCTGCA  1836
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479  AGAAGCCTATCCAGGACCCTCAGCCCACGCCTTCTGCACCAGCCATGGGGGCTGCTGACCAGCTAGCATCTGCA  3552

Query 1837  AGGGAGGCCTCTCAGGAATTGCCTCCTGGCTTTCTCTACAAGGTGGAAACACTGCATGATTTTGAGGCAGCAAA  1910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553  AGGGAGGCCTCTCAGGAATTGCCTCCTGGCTTTCTCTACAAGGTGGAAACACTGCATGATTTTGAGGCAGCAAA  3626

Query 1911  TTCTGATGAACTTACCTTACAAAGGGGTGATGTGGTGCTGGTGGTCCCCTCAGATTCAGAAGCTGATCAGGATG  1984
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627  TTCTGATGAACTTACCTTACAAAGGGGTGATGTGGTGCTGGTGGTCCCCTCAGATTCAGAAGCTGATCAGGATG  3700

Query 1985  CAGGCTGGCTGGTGGGAGTGAAGGAATCAGACTGGCTTCAGTACAGAGACCTTGCCACCTACAAAGGCCTCTTT  2058
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701  CAGGCTGGCTGGTGGGAGTGAAGGAATCAGACTGGCTTCAGTACAGAGACCTTGCCACCTACAAAGGCCTCTTT  3774

Query 2059  CCAGAGAACTTCACCCGACGCTTAGAT  2085
            |||||||||||||||||||||||||||
Sbjct 3775  CCAGAGAACTTCACCCGACGCTTAGAT  3801