Nucleotide Global Alignment
Description
- Query:
- TRCN0000477053
- Subject:
- XM_006524691.1
- Aligned Length:
- 4130
- Identities:
- 2093
- Gaps:
- 1777
Alignment
Query 1 ATGTCTGCGGAGAGCGGCCCTGGGACGAGATTGAGAAATCTGCCAGTAATGGGGGATGGACTAGAAACTTCCCA 74
||||||.|||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGTCTACGGAGAGCGGCCCTGGGACAAGATTGAGAAATCTGCCAGTAATGGGGGATGGACTAGAAACCTCCCA 74
Query 75 AATGTCTACAACACAGGCCCAGGCCCAACCCCAGCCAGCCAACGCAGCCAGCACCAACCCCCCGCCCCCAGAGA 148
||||||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||.||.||||||||||
Sbjct 75 AATGTCTACAACGCAGGCCCAGGCCCAACCCCAGCCAGCAAATGCAGCCAGCACCAATCCTCCACCCCCAGAGA 148
Query 149 CCTCCAACCCTAACAAGCCCAAGAGGCAGACCAACCAACTGCAATACCTGCTCAGAGTGGTGCTCAAGACACTA 222
|||||||||||||||||||||||||.|||||.||||||||||||||.|||||||||||||||||||||||||||
Sbjct 149 CCTCCAACCCTAACAAGCCCAAGAGACAGACAAACCAACTGCAATATCTGCTCAGAGTGGTGCTCAAGACACTA 222
Query 223 TGGAAACACCAGTTTGCATGGCCTTTCCAGCAGCCTGTGGATGCCGTCAAGCTGAACCTCCCTGATTACTATAA 296
|||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGAAACACCAGTTTGCGTGGCCTTTCCAGCAGCCCGTGGATGCCGTCAAGCTGAACCTCCCTGATTACTATAA 296
Query 297 GATCATTAAAACGCCTATGGATATGGGAACAATAAAGAAGCGCTTGGAAAACAACTATTACTGGAATGCTCAGG 370
|||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATTATTAAAACACCCATGGATATGGGAACAATAAAGAAGCGCTTGGAAAACAACTATTACTGGAATGCTCAGG 370
Query 371 AATGTATCCAGGACTTCAACACTATGTTTACAAATTGTTACATCTACAACAAGCCTGGAGATGACATAGTCTTA 444
||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||
Sbjct 371 AATGTATCCAGGACTTCAACACTATGTTTACAAATTGTTACATCTATAACAAGCCTGGAGATGACATCGTCTTA 444
Query 445 ATGGCAGAAGCTCTGGAAAAGCTCTTCTTGCAAAAAATAAATGAGCTACCCACAGAAGAAACCGAGATCATGAT 518
|||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||||||||.|||||||||||
Sbjct 445 ATGGCAGAAGCTCTGGAGAAGCTCTTCTTGCAAAAAATCAATGAACTGCCTACAGAAGAAACTGAGATCATGAT 518
Query 519 AGTCCAGGCAAAAGGAAGAGGACGTGGGAGGAAAGAAACAGGGACAGCAAAACCTGGCGTTTCCACGGTACCAA 592
||||||||||||||||||||||||.||||||||||||||||||.|||||||.|||||.||.|||||||||||||
Sbjct 519 AGTCCAGGCAAAAGGAAGAGGACGAGGGAGGAAAGAAACAGGGGCAGCAAAGCCTGGTGTATCCACGGTACCAA 592
Query 593 ACACAACTCAAGCATCGACTCCTCCGCAGACCCAGACCCCTCAGCCGAA---TCCTCCTCCTGTGCAGGCCACG 663
||||||||||||||||.|||.||||||||||||||||.|||||||.||| ||||||.||||||||||||||.
Sbjct 593 ACACAACTCAAGCATCAACTTCTCCGCAGACCCAGACGCCTCAGCAGAACCCTCCTCCACCTGTGCAGGCCACA 666
Query 664 CCTCACCCCTTCCCTGCCGTCACCCCGGACCTCATCGTCCAGACCCCTGTCATGACAGTGGTGCCTCCCCAGCC 737
.||||||||||.|||||.||||||||.||||||||.|.||||.|.||||||||||||.|||||||.||.|||||
Sbjct 667 ACTCACCCCTTTCCTGCTGTCACCCCAGACCTCATTGCCCAGCCTCCTGTCATGACAATGGTGCCCCCTCAGCC 740
Query 738 ACTGCAGACGCCCCCGCCAGTGCCCCCCCAGCCACAACCCCCACCCGCTCCAGCTCCCCAGCCCGTACAGAGCC 811
|||.|||||.||..|.||.||.|||||||||||||.|||||||||.|||||||.|||.|||||.||.|||||.|
Sbjct 741 ACTTCAGACTCCTTCACCGGTACCCCCCCAGCCACCACCCCCACCTGCTCCAGTTCCACAGCCTGTGCAGAGTC 814
Query 812 ACCCACCCATCATCGCGGCCACCCCACAGCCTGTGAAGACAAAGAAGGGAGTGAAGAGGAAAGCAGACACCACC 885
||||.||||||||.|||.|||||||.||||||||||||||||||||.||.|||||||||||||||||.||||||
Sbjct 815 ACCCGCCCATCATTGCGACCACCCCCCAGCCTGTGAAGACAAAGAAAGGGGTGAAGAGGAAAGCAGATACCACC 888
Query 886 ACCCCCACCACCATTGACCCCATTCACGAGCCACCCTCGCTGCCCCCGGAGCCCAAGACCACCAAGCTGGGCCA 959
|||||.||||||||.|||||||||||.|||||||||||.|||.||||.||||||||||||.||||||||||.|.
Sbjct 889 ACCCCTACCACCATCGACCCCATTCATGAGCCACCCTCACTGGCCCCAGAGCCCAAGACCGCCAAGCTGGGTCC 962
Query 960 GCGGCGGGAGAGCAGCCGGCCTGTGAAACCTCCAAAGAAGGACGTGCCCGACTCTCAGCAGCACCCAGCACCAG 1033
.|||||||||||||||.|.||||||||.||||||||||||||.||.||.|||||.|||||||||||||..||||
Sbjct 963 TCGGCGGGAGAGCAGCAGACCTGTGAAGCCTCCAAAGAAGGATGTACCGGACTCACAGCAGCACCCAGGGCCAG 1036
Query 1034 AGAAGAGCAGCAAGGTCTCGGAGCAGCTCAAGTGCTGCAGCGGCATCCTCAAGGAGATGTTTGCCAAGAAGCAC 1107
||||||||||||||.||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.||.
Sbjct 1037 AGAAGAGCAGCAAGATCTCTGAGCAGCTAAAGTGCTGCAGTGGCATCCTCAAGGAGATGTTTGCCAAGAAACAT 1110
Query 1108 GCCGCCTACGCCTGGCCCTTCTACAAGCCTGTGGACGTGGAGGCACTGGGCCTACACGACTACTGTGACATCAT 1181
||.|||||.||||||||.|||||||||||||||||.||||||||||||||.||.||||||||||||||||||||
Sbjct 1111 GCTGCCTATGCCTGGCCTTTCTACAAGCCTGTGGATGTGGAGGCACTGGGTCTGCACGACTACTGTGACATCAT 1184
Query 1182 CAAGCACCCCATGGACATGAGCACAATCAAGTCTAAACTGGAGGCCCGTGAGTACCGTGATGCTCAGGAGTTTG 1255
|||.||.||||||||||||||||||||||||||||||||.|||.||||.||||||.|.|||||.|||||.||||
Sbjct 1185 CAAACATCCCATGGACATGAGCACAATCAAGTCTAAACTAGAGTCCCGAGAGTACAGAGATGCCCAGGAATTTG 1258
Query 1256 GTGCTGACGTCCGATTGATGTTCTCCAACTGCTATAAGTACAACCCTCCTGACCATGAGGTGGTGGCCATGGCC 1329
|||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||||.
Sbjct 1259 GTGCTGATGTCCGATTGATGTTCTCCAACTGCTACAAGTACAACCCCCCTGACCATGAAGTGGTAGCCATGGCT 1332
Query 1330 CGCAAGCTCCAGGATGTGTTCGAAATGCGCTTTGCCAAGATGCCGGACGAGCCTGAGGAGCCAGTGGTGGCCGT 1403
||.||.||||||||||||||.|||||||||||||||||||||||.||.||||||||.||||||||.||..|.||
Sbjct 1333 CGAAAACTCCAGGATGTGTTTGAAATGCGCTTTGCCAAGATGCCTGATGAGCCTGAAGAGCCAGTTGTTACAGT 1406
Query 1404 GTCCTCCCCGGCAGTGCCCCCTCCCACCAAGGTTGTGGCCCCGCCCTCATCCAGCGACAGCAGCAGCGATAGCT 1477
||||||.||.||||||||.||.||.||.|||||.||.|||||.||||||||.||.||||||||||||||.||.|
Sbjct 1407 GTCCTCTCCTGCAGTGCCACCCCCTACAAAGGTGGTAGCCCCACCCTCATCTAGTGACAGCAGCAGCGACAGTT 1480
Query 1478 CCTCGGACAGTGACAGTTCGACTGATGACTCTGAGGAGGAGCGAGCCCAGCGGCTGGCTGAGCTCCAGGAGCAG 1551
|.||.|||||.||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||||||||.|||
Sbjct 1481 CTTCCGACAGCGACAGTTCCACTGACGACTCTGAGGAAGAGCGAGCCCAGCGGCTGGCTGAACTCCAGGAACAG 1554
Query 1552 CTCAAAGCCGTGCACGAGCAGCTTGCAGCCCTCTCTCAGCCCCAGCAGAACAAACCAAAGAAAAAGGAGAAAGA 1625
|||||.||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||
Sbjct 1555 CTCAAGGCCGTGCATGAGCAGCTTGCAGCCCTCTCACAGCCCCAGCAGAACAAACCAAAGAAAAAGGAGAAGGA 1628
Query 1626 CAAGAAGGAAAAGAAAAAAGAAAAGCACAAAAGGAAAGAGGAAGTGGAAGAGAATAAAAAAAGCAAAGCCAAGG 1699
||||||||||||||||||.|||||||||||||.||||||.||||||||.||.|||||||||||||||.||||||
Sbjct 1629 CAAGAAGGAAAAGAAAAAGGAAAAGCACAAAAAGAAAGAAGAAGTGGAGGAAAATAAAAAAAGCAAAACCAAGG 1702
Query 1700 AACCTCCTCCTAAAAAGACGAAGAAAAATAATAGCAGCAACAGCAATGTGAGCAAGAAGGAGCCAGCGCCCATG 1773
|||.||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||..||||.|
Sbjct 1703 AACTTCCTCCCAAAAAGACAAAGAAAAATAACAGCAGCAACAGCAATGTGAGCAAGAAGGAACCAGTACCCACG 1776
Query 1774 AAGAGCAAGCCCCCTCCCACGTATGAGTCGGAGGAAGAGGACAAGTGCAAGCCTATGTCCTATGAGGAGAAGCG 1847
||||.||||||.||||||||.|||||.||.||.||.|||||.|||||.|||||.|||||.||||||||||||||
Sbjct 1777 AAGACCAAGCCGCCTCCCACATATGAATCAGAAGAGGAGGATAAGTGTAAGCCCATGTCTTATGAGGAGAAGCG 1850
Query 1848 GCAGCTCAGCTTGGACATCAACAAGCTCCCCGGCGAGAAGCTGGGCCGCGTGGTGCACATCATCCAGTCACGGG 1921
||||||.||..|.||.||||||||.||.||.||.||||||||.|||||.||.||.|||||.||.||||||.|||
Sbjct 1851 GCAGCTAAGTCTAGATATCAACAAACTTCCTGGTGAGAAGCTAGGCCGTGTAGTACACATAATTCAGTCAAGGG 1924
Query 1922 AGCCCTCCCTGAAGAATTCCAACCCCGACGAGATTGAAATCGACTTTGAGACCCTGAAGCCGTCCACACTGCGT 1995
|.||.||.||.||.||.|||||||||||.||||||||.||.||||||||||||||||||||.||.|||||.||.
Sbjct 1925 AACCATCACTTAAAAACTCCAACCCCGATGAGATTGAGATTGACTTTGAGACCCTGAAGCCATCTACACTACGA 1998
Query 1996 GAGCTGGAGCGCTATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAGAAAGTTGATGTGATTGC 2069
|||.|||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||
Sbjct 1999 GAGTTGGAGCGATATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAAAAAGTTGACGTGATTGC 2072
Query 2070 CGGCTCCTCCAAGATGAAGGGCTTCTCGTCCTCAGAGTCGGAGAGCTCCAGTGAGTCCAGCTCCTCTGACAGCG 2143
.||.||.||||||||||||||.|||||.|||||.||||||||||||.||||.||.|||||||||||||||||.|
Sbjct 2073 TGGTTCTTCCAAGATGAAGGGATTCTCATCCTCTGAGTCGGAGAGCACCAGCGAATCCAGCTCCTCTGACAGTG 2146
Query 2144 AAGACTCCGAAACA------GCT----------------------------------------------TTCTG 2165
|||||||.|||||| ||| .||..
Sbjct 2147 AAGACTCTGAAACAGAGATGGCTCCCAAGTCAAAAAAGAAGGGGCACACTGGGAGGGACCAGAAAAAGCATCAT 2220
Query 2166 CACCA-------------GTGGAG--------ACTTCGTGT-CCCCAG----------------------GGCC 2195
||||| .||.|| |..||.||| |||||| .|||
Sbjct 2221 CACCATCACCATCCACAGATGCAGCCAGCCCCAGCTCCTGTGCCCCAGCAGCCGCCCCCACCTCCACAGCAGCC 2294
Query 2196 T--TCC----------CCGTATCA-CAGTCACGTGCAG--------------------TGCGGCC-----GCTT 2231
| ||| |||.|.|| ||| || |||| |.||.|| ||..
Sbjct 2295 TCCTCCACCCCCACCTCCGCAGCAGCAG-CA---GCAGCAACCTCCACCCCCACCACCTCCGCCCTCCATGCCA 2364
Query 2232 CAG-----------GGAGATG-------------------------CTTCGCTGGT-----TTCTGGTGGATGT 2264
||| .|.|||| ||.|.|.||| |.||||
Sbjct 2365 CAGCAGACTGCCCCAGCGATGAAGTCCTCGCCCCCACCCTTCATCACTGCCCAGGTCCCCGTCCTGG------- 2431
Query 2265 GGAGCAGACTGCAGCTGGCCA----------------------GCCGCATC-----GCCAGTCT---------- 2301
.||..||||| |||| |||.|.|| |||..|||
Sbjct 2432 ------AACCACAGCT-GCCAGGCAGTGTCTTTGACCCTATTGGCCACTTCACCCAGCCCATCTTGCACCTGCC 2498
Query 2302 GCTGCTGGCCCTGC--CATCACCTGGGCCCCAGCCATTGCCT---------ACCCCTCCCCAGAGTGTGCTC-- 2362
||.||.||..|||| |.|||||| |||||||||| ||| ||.||.||||| .|||
Sbjct 2499 GCAGCCGGAGCTGCCTCCTCACCT--GCCCCAGCCA---CCTGAGCACAGCACTCCACCCCA------TCTCAA 2561
Query 2363 ----GTTGCTGTGTTGGCTGCTCC-------------------------------------------------- 2382
..|||||||.|..||.||||
Sbjct 2562 CCAGCATGCTGTGGTCTCTCCTCCAGCTTTGCACAATGCGCTGCCCCAACAGCCATCTCGGCCCAGTAACCGAG 2635
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2636 CTGCTGCTCTGCCCCCAAAGCCTACCCGACCCCCAGCTGTGTCCCCTGCCCTGGCCCAGCCCCCCCTGCTCCCA 2709
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2710 CAACCACCAATGGCTCAGCCCCCCCAAGTGCTGCTGGAGGATGAAGAGCCACCTGCCCCACCCCTCACCTCCAT 2783
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2784 GCAGATGCAGTTGTACCTACAGCAGCTGCAGAAGGTGCAGCCTCCCACACCACTACTCCCTTCCGTGAAGGTGC 2857
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2858 AGTCCCAACCCCCACCGCCTTTGCCGCCTCCACCCCACCCTTCTGTGCAGCAGCAGCAGCTCCAGCCACAGCCA 2931
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2932 CCGCCACCCCCACCTCCTCAGCCACAGCCACCACCCCAGCAACAACACCAGCCTCCACCACGACCAGTTCACTT 3005
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3006 GCCATCCATGCCCTTTTCTGCTCATATTCAGCAGCCCCCACCACCCCCAGGACAGCAACCTACTCACCCACCCC 3079
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3080 CAGGACAGCAGCCCCCACCACCACAGCCTGCCAAGCCCCAGCAAGTCATCCAGCATCACCCTTCCCCCCGGCAC 3153
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3154 CACAAGTCAGACCCCTACTCAGCTGGTCATCTTCGTGAGGCTCCCTCTCCGCTTATGATACATTCCCCTCAGAT 3227
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3228 GCCACAGTTCCAGAGCCTGACCCATCAGTCTCCTCCCCAGCAAAACGTCCAGCCTAAGAAGCAGGAGCTGCGAC 3301
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3302 CACCTTCAGTCGTCCAGCCCCAGCCCCTGGTGGTAGTAAAGGAGGAGAAGATTCACTCACCAATCATTCGCAGC 3375
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3376 GAGCCTTTCAGCACCTCACTTCGACCAGAGCCCCCCAAGCACCCAGAGAACATCAAGGCCCCAGTCCACCTGCC 3449
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3450 CCAGCGGCCTGAGATGAAGCCTGTAGACATAGGGAGGCCTGTGATCCGGCCTCCAGAGCAGAGTGCACCCCCAC 3523
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3524 CAGGGGCCCCTGACAAGGACAAACAGAAGCAGGAGCCAAAAACACCAGTGGCACCCAAAAAGGACCTGAAAATT 3597
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3598 AAGAACATGGGCTCCTGGGCCAGCCTGGTACAGAAGCATCCGACCACCCCATCCTCCACAGCCAAGTCCTCAAG 3671
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3672 TGACAGCTTTGAGCATTTCCGCCGTGCTGCTCGGGAGAAGGAGGAGAGGGAAAAGGCCCTGAAGGCTCAGGCTG 3745
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3746 AGCATGCAGAGAAGGAGAAGGAGCGGCTGAGGCAGGAGCGCATGAGGAGCCGAGAGGATGAAGATGCGCTGGAA 3819
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3820 CAGGCACGTCGAGCCCATGAGGAGGCACGACGGCGCCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGAGACAGGA 3893
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3894 GCAGCAGCAGCAGCAGCAGCAGGCAGCTGCTGTGGCCGCTGCCTCTGCCCCCCAGGCCCAGAGCTCCCAGCCCC 3967
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3968 AGTCTATGCTGGACCAGCAGAGGGAGTTGGCCCGGAAACGAGAGCAGGAGCGGAGGCGCAGGGAGGCAATGGCA 4041
Query 2383 ------------------------------------------------------------ 2382
Sbjct 4042 GCTACAATTGACATGAATTTCCAGAGTGATCTTTTGTCAATATTTGAAGAAAATCTTTTT 4101
