Nucleotide Global Alignment

Description

Query:
TRCN0000477107
Subject:
XR_001744710.1
Aligned Length:
3574
Identities:
457
Gaps:
3101

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCGACCCGTGGCTCCCCCTCGCAACTTGGCGGGCCTCCTCCCTTTTGTCCGGCCCGGTCCGGCCGCCGCCGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCCGCGCCTGGCGCCGAGCTCCCGGGTCCCCGGGCCGGCTGTCGGTGCCGGCAGGGCGCGGAGGGGGCGGGGG  148

Query    1  ---------------------ATGAGCTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAG  53
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCGCGGCTCGTCCCCCAGCGGATGAGCTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAG  222

Query   54  CACCGGCTGCAAGTTGCCAGCGTCGCCAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCT  127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CACCGGCTGCAAGTTGCCAGCGTCGCCAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCT  296

Query  128  TCCTGTTCTCCAAGACCAGGTGCAAGTTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGAT  201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCCTGTTCTCCAAGACCAGGTGCAAGTTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGAT  370

Query  202  GAGGAAGGATTCCTAGAGCTGCCCTCCTCAGGGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGT  275
            |||||||||||||||||||||||||||||.|.||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GAGGAAGGATTCCTAGAGCTGCCCTCCTCGGAGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGT  444

Query  276  GGTGTCCGGCGGTGGCAGCTTCTCCAGCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCC  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGTGTCCGGCGGTGGCAGCTTCTCCAGCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCC  518

Query  350  CACTGGCTGACCAGAACATATCCGTGTTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGG  423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||.||   
Sbjct  519  CACTGGCTGACCAGAACATATCCGTGTTCATGCTGTCCACGTATCAGACAGACTTCATCCTG----TCCAG---  585

Query  424  GACCTGCCCTTTGTCACCCACACGTTGT----------CATCAGAGT------TCACCATCCTG----------  471
               .||||   .||||.||||.|..|||          ||.||| ||      ||||||.||||          
Sbjct  586  ---ATGCC---GGTCATCCACCCACTGTCCAGCCCGAGCAACAG-GTTCTGTGTCACCAGCCTGGACCCCGACA  652

Query  472  -------TGGTCAGTGGCTAGACTG-------------------------------------------------  489
                   ||  |.||.||.|.|||.                                                 
Sbjct  653  CGCTGCCTG--CTGTTGCCACACTCCTCATGGATGTCATGTCCTACTTCAATGGAGAAGAGAACAGAAGAATAA  724

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct  725  CAGCAGAAGATACGCAGCCTGTAATGGACTGAATATCTGTGTCCCCCTAAACCCACATATTGAAATCCTTCCCC  798

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct  799  CAGTGTGATGCTGTTTGGAAGTGGGGCCTTTGGGAGGTGATTGGGTCATAGGGGTGCAGCCCTCATGGATGGAT  872

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct  873  GAATGCCCTTCTAAGCCCAGGCCAGAGGGCTAGCTTGCTGTTTCTCCTCCAGGTGAGGATACAACTAGAAGCCA  946

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct  947  GCAGTCTACAGGCTGGAAGAAGGCCCTCACCAGAACCCAACCCTTGGACTTCAGCCTCCAGAACTATTCATTCA  1020

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1021  GCTTTTCCAGACCAGGCATCACCGAGCGGAGAGAGGGGAAACACCCTGGCTTCTCTTTGGCACATCAGCCCCTA  1094

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1095  GTTCTTGAGAGAGAAGGGCAGGGTGGTCTACTCACCATGTCTGTATCCTGCCGTTCTTCATTTGACTCATCCTG  1168

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1169  GATTTCTAACTCTTCTTCCTCGTCCTCTTCCATAAGGCTGAGTCTGATGTAGGGGCAAAGAGACTGGCTTTTCA  1242

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1243  AACTGTTCTTTGAGGACCCCTGAGAGTTTCTCAGACACCCGGGGTGGGGGAAGTGGGGAGCAGTAAGTACAGCA  1316

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1317  TAGTAGTTTCCCGATTGTGCTGACAGGAAGTGCTCTGTGGCTAAAACAAGTCCAAAAAGCACCCACAGAGAGGC  1390

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1391  AATGGGTGAGACAGGAATCCCCTCACAGTGGGCGACAGATCTGAAGTGAAGACAGGAGATGATGAGAAAAGCTC  1464

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1465  ACCGCATCAGCTGGTTGCCCAGGCCAGGACCTGAAGGGTTGTGTGGAGTCTGGAAATATTGTGGACCCAAGAAC  1538

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1539  CTTGACCTCTCGGTGCCTGCGACGGGCTGACTGCTGGGAATGAAGCAGGATCAATGATGGGATAAAAATCAAGG  1612

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1613  GGCCTTGGTGTACCTTGTTGTAGTGTTTGAAAACATCTGAGGCTGCATCCATCTCCAGCACCCCATAAAGCAAC  1686

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1687  AGCTTGCAGAACCCGGCTAGGAGGCGGCGCCGCTGGTGTAGCCGCTCTATCTGTAAATGATCCTCCTGGGAATC  1760

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1761  ACCTGGCTCACATGGAAGGCAAAAGGGAATCACAGACTTAAGCTTCCTGCCCTATATTTCTGAGCTACACCCAA  1834

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1835  GCCCCAGCCCTTACTGAGCCCCAGGTATAGAGTCACTGCACCACTGCCCAGGTCTCCCGGCTGGATGAAGACGT  1908

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1909  GGTCCATGAGGAAGCTGGCTAGCTCAGACTGGAGAGTAGCTTCAGGAAAAAAGACAAGTGGCCTAAGGAAATCA  1982

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 1983  CGGCCCCCAACAATCATCTGAGGGCTAAAGATGAGAAGTAGATCACTTAATAAGACAAAAGCCTGTAGGGGGAA  2056

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2057  AAGAAAGGATGTTTAAAAGGACAGAATGTTTCCCAAGGTAGAAATGACACTGTCAATTTCTCCTTGGAATGGGG  2130

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2131  GCAGGGATACTCGCCTTGTTGCTCCCACTTGAGTCAGTACTCACCTGCTCCTGGATCTCAGTATCCACATCTGA  2204

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2205  GAGGCAACTCTGGCAGAGTTCACAGAAGGCCACCATTCTGTCCCTCAAACTCGACAGCTGCTTCTGTGGGCACA  2278

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2279  GTGGCTTGAAGGGGAAGAATGAAGACACAGACTCCTCTGTTCCCATTATCCCATCTAAGACCCACACTCACCTG  2352

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2353  GGAAGCATCTGATTTAGAAATGTGGGTTAGTGTCCAGAGAATGGAAAAATAGACAAGAGTCAAGGCTGGCAGGA  2426

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2427  TAACCTGTAACAACAAAGGGTTTGAAAAATGAGGTTTGGGTTAGGAGAGGGAGAGACAGATAGCCAGAAACACA  2500

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2501  CCAGTGAAGAGGAGAGAAAATGAGTAAAGGGAGAGCTAATTCCTTTTCCAGTGGAAAATGAGTGATATTCTGGA  2574

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2575  CATTCTTCAGAGGCATCTACACGAAGTAGAAATGTCACCGCTCCCTAATTTACTCTACGTCTTCTAGAATCCCT  2648

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2649  CAATATTATCCTTGGCTTCCAGGAAATCCAAGAAGACCCTGGAAGTAGAGTCCACCTTCTAAGAGAGGAATGTA  2722

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2723  AGAGGTGACCCCCACCCACCTGATCTTCCTCGCTTTGTCCACTCCACGCACTGAGACTTGACACACCTAGTGGC  2796

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2797  CACCTAGAACGTAGGTCCTTAAAATCTAGCCCCCCAGCCCCCAACCCATCTCTAGCCTGTCCACTCACCTGGTG  2870

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2871  AGGAACCTCTCCTGTGTCCACAGCCTTCTGCAGGAGTTGGCAACATGGCTCATAGAGCTCCCAGCGAGTCAGGT  2944

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 2945  CATGAGTGCTTTGGGGGAGAAAGGGGAATGTTATACTGGAAAAGAACAGAGGGAACCAACTCCACAGACACCAG  3018

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 3019  TAAAAACGGGATGGGGAAGAGGAGGAAAGCCACTCACTTGTAGAAGGCAGAGAGGCGTTTCAGAGTGGCTGCCA  3092

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 3093  GATTATATACCTCATCCTCATCTAGGAAGGACGACTGAGAAGGAAAGAAGATCCACAATAGCATTTCCCCCAGA  3166

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 3167  ACTCATCAGTCCACATCCCCCGTCTTGCAGCCCCTCCCACCCTTGTTTGGGGTGTCCCATTGTCCAGCCCCAGC  3240

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 3241  TCCTACCTGTAACAGCTCTTCAAGCTCCTGCTGGAAGCGGTCAGTCAGCAAATCTACTAGCTGGCTGCGGGCAA  3314

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 3315  AGTCCGCCCGGCTGAAGAAAGTGAATTCGGGATTACAGAGCAGGTAGAGGGCATGCGCCCCAGCCTCAAGCACC  3388

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 3389  GCTGGCTCTGCATGCTTCACCACCACCTCCTGGAGTTGCTGCAGGAACAGCTCCAGGTGCTGAGAAGAAAAGGC  3462

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct 3463  AGAAGATGGTGTGCTGTGGGGATGGGAGGAGGACACTCTTCTGGCGGGAAGTGGAACGGGGTTAAAAGCATTAA  3536

Query  490  ----------------------  489
                                  
Sbjct 3537  ACTTCAAGGATAAGATGCCTAA  3558

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