Nucleotide Global Alignment
Description
- Query:
- TRCN0000477107
- Subject:
- XR_001744711.1
- Aligned Length:
- 4129
- Identities:
- 487
- Gaps:
- 3640
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGCGCGGACCGCGCATGCGCAGTGGGGACCGGCGTTTGAGTGGCAAGTTGTTTGTTACAGCGAACACCAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCCCGCGCCGGCACCCGCGCGCCGCTGCTCCGCCGGCGCTGCCTCCCTCGACCCGTGGCTCCCCCTCGCAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGGCGGGCCTCCTCCCTTTTGTCCGGCCCGGTCCGGCCGCCGCCGCCCCCCGCGCCTGGCGCCGAGCTCCCGG 222
Query 1 ---------------------------------------------------------------------ATGAG 5
|||||
Sbjct 223 GTCCCCGGGCCGGCTGTCGGTGCCGGCAGGGCGCGGAGGGGGCGGGGGCCGCGGCTCGTCCCCCAGCGGATGAG 296
Query 6 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 370
Query 80 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 444
Query 154 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 518
Query 228 CTCAGGGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 301
|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCGGAGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 592
Query 302 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 666
Query 376 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 740
Query 450 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTG---------------------------------- 489
||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTGTAGCAGCCGAGAACCTCGGCATCACCAGTGGCTT 814
Query 490 -------------------------------------------------------------------------- 489
Sbjct 815 CGTGAAGCCCAAGCTGGTCCAGATGCCGGTCATCCACCCACTGTCCAGCCCGAGCAACAGGTTCTGTGTCACCA 888
Query 490 -------------------------------------------------------------------------- 489
Sbjct 889 GCCTGGACCCCGACACGCTGCCTGCTGTTGCCACACTCCTCATGGATGTCATGTCCTACTTCAATGGGTGAGGA 962
Query 490 -------------------------------------------------------------------------- 489
Sbjct 963 TACAACTAGAAGCCAGCAGTCTACAGGCTGGAAGAAGGCCCTCACCAGAACCCAACCCTTGGACTTCAGCCTCC 1036
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1037 AGAACTGTGAGAAATACATACCTGCTGTTTATTCATTCAGCTTTTCCAGACCAGGCATCACCGAGCGGAGAGAG 1110
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1111 GGGAAACACCCTGGCTTCTCTTTGGCACATCAGCCCCTAGTTCTTGAGAGAGAAGGGCAGGGTGGTCTACTCAC 1184
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1185 CATGTCTGTATCCTGCCGTTCTTCATTTGACTCATCCTGGATTTCTAACTCTTCTTCCTCGTCCTCTTCCATAA 1258
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1259 GGCTGAGTCTGATGTAGGGGCAAAGAGACTGGCTTTTCAAACTGTTCTTTGAGGACCCCTGAGAGTTTCTCAGA 1332
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1333 CACCCGGGGTGGGGGAAGTGGGGAGCAGTAAGTACAGCATAGTAGTTTCCCGATTGTGCTGACAGGAAGTGCTC 1406
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1407 TGTGGCTAAAACAAGTCCAAAAAGCACCCACAGAGAGGCAATGGGTGAGACAGGAATCCCCTCACAGTGGGCGA 1480
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1481 CAGATCTGAAGTGAAGACAGGAGATGATGAGAAAAGCTCACCGCATCAGCTGGTTGCCCAGGCCAGGACCTGAA 1554
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1555 GGGTTGTGTGGAGTCTGGAAATATTGTGGACCCAAGAACCTTGACCTCTCGGTGCCTGCGACGGGCTGACTGCT 1628
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1629 GGGAATGAAGCAGGATCAATGATGGGATAAAAATCAAGGGTAAGAAGAGGATGTAAGGCAGCTGGTGTTAATGG 1702
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1703 GGAGAAAAGCTCAGAGAGATGCATTTTAAAGCTAAACAATGGAGAAGGGTTTGAGAAGAACCCAACAATGTGGG 1776
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1777 AGTGCTACAGCAGGGAACCATGAAACAGAAACAGCAAGATGGAGGCAGCCAGACACCAAACTGGGAACTCAGAC 1850
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1851 ACCCAGATTCCCTCCATGGCCTCACCCCTGGGCAAAATCCAACTCTGAGCCATCTTCTTCCTCCATCTCTTTCA 1924
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1925 ACCCCCACAGGGGCTGCCTGCTCTTCACAGCTGTGGAGGTGAGGGTGGGCGTGGGCGGGATGCTGTTCAGCTGC 1998
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1999 AGACTTTCTTCCTGGGACGAGGAGACGTCCTCTCTGTTAGGCTTGGCAGGCCCTGCCAAGCAGATGCATACATT 2072
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2073 AACCACAGCCCAGGGCCTGCGACAGGTGTGCTCTCTTTCCAAGACCTGCCCAGGATTTAGTAAGGGAAAGTCAA 2146
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2147 TCAGGAAGAGAATGGAAAACTTATACAGCTTCATTCTGTTGCCCTCAAATGGGCATAGCCCTATGTACTAAATA 2220
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2221 CATAGCCCTATGTACCAAAAAGTAAGGCTTAGAGAATTGTAGCTAGGCCTTGTCCAAGAAGAACTTGCTACACA 2294
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2295 GCCTAGAAAACAAGATGGAAAGATATATAAATATACATTTCACAGATAAACTGTAACAGGTGAACAGGTGAACA 2368
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2369 CAAACATGAGGGAGGGTTGGAGTCTCTAAGATTGAGAGGTCTGAGTTAGCCAATGAAGACATCTGAGATCCTAT 2442
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2443 CCAAGATTTCTGTGGTCAGAAAAAGCTGTAAATGGCAATAGAGTTTTGGTACCAGAGGCTAGAGTGGACAAATG 2516
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2517 AGGGCCAGGGAGGAACCGGAAAATGGGAGACAGGATTTTCTAAAAGCTAGAAAAAAATGAAGTGATTGCAATGC 2590
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2591 CAGTATAACTGATATGATATGAAGGGGGACTTATCTCCTGCAGAGATTGGAGAAGGTAGAGGAGGAGAAAGAAT 2664
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2665 CCAAAGATTCTCACTGCCTGAGAAAACCCAGGCAATACTATTTTAAAGCATCAGTCAAATTGACATTAACATCT 2738
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2739 GTTAACTGTAAACAGTCACACTCCCATTACCCCCCTTCTCCACTAAAAACAATAATCCCAAAGTGAGCGCTCAG 2812
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2813 CCTATGGGTTTAAGCAGAGGGCTACAGAAAACAGGGAAGAGACATACCCCTGGGCTTGGATTCCCAGAGAGGAA 2886
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2887 ACCTTGGGGCCCCAGATGTGTCCTCCTGATCTCCCTGAGCTATTAATGGTGTGATGCCCGAGGGCTGGGCCCTT 2960
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2961 GAGTCTCTCCTCTTCTCCATCTTCACTGGCTTCCCCAGCCACTCACGTTCATGTCCTTAAATATCACCTATACT 3034
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3035 CTGCCACATCCCAAAGGGATCTCAAGCCTTCAGCTCTCCCCTGAACTCCATCTTAACAGCCCCCATGGTTTGTT 3108
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3109 CAACATCTCCACCTGTAATCCTGTGGCCAACACCAATGCCCCAACCTTCCCCCACAGCTATCTTCACTCTCTGC 3182
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3183 CTTCCCCATCTCAGATACTGTCAACTCCATCCTTCTGTCAGGCCAAAATCCTTGGAGCCATCCTCAACTGCTCT 3256
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3257 TTTTGTCTTACATCCCACATCCAGTTTGTCAGAAAAGCCTATTAGAGATACCTTGAAAATGCACCCAGAATCTG 3330
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3331 GCCGTTTCTCGGCACCTCCACCATTGCCCCCGGCCTAAGAAGCTCTCTTATCTTGCATCTTGGGCTGGACTCCT 3404
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3405 ACAACAGCCACAACCTCCCTGCTGGTCTCCCAGCTTCTAGCCTTCCCCCATCTCCTGTCGTTTTCGACACAGCA 3478
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3479 GCCAGAAGGATCCTTTAAAAACAGAGGTTGATCCTGTCGTTCCTCAAAATCCTCCAATGGTTTTCCTACTGCAC 3552
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3553 TCAGAGTAAAAGCCAGTCTCTGCCTTAGATGCTCTGGGATCCTGTACCCTCTTTGGTCTCATGTCCTACAATCT 3626
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3627 GCATTCTGGCCATAATGGTCTTCTCTGCTGTTCCTTGAACATTCCAGGAACATTCCCCCCATCCCCTCGTGGCC 3700
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3701 TCAGGACTGGCTGCTTCCTTTGGTATGCTATTCTGATACACACTAAGCACCCTCCCTCACCTGTTATAAAAAAT 3774
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3775 TCGCTGGGAGGCCAATAGGCTGAAATGGCTCCTGCACTTTGGGTTCCTAAGTCAGCAAACTGAAACTCAACTCA 3848
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3849 GAGTGAAAGTGTTGTGTGTAACCTAGGAGCAGGAAACTTCAGCTTAACCAGTCAGAAACTACCGACTAACCTCT 3922
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3923 AACAAGAGATTTATGGTCAGTTAACCTCTAAATATGAACTTTCCACTCTAACCAATCAAATAGTTTCTTTGTCT 3996
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3997 TGCTCCCAGAGACACCTTGTAAGTGTCCCCTCTGGTTTCCTCGGTGGTGGCGCCCTGAACTGCTGGCGGTCTGC 4070
Query 490 ----------------------------------------------------------- 489
Sbjct 4071 CACTGCCTGATTGATAAAATTGCTGAATGCTCAAATAAACCTGTTAAAATTGTAATGTG 4129
