Nucleotide Global Alignment
Description
- Query:
- TRCN0000477107
- Subject:
- XR_002956433.1
- Aligned Length:
- 5153
- Identities:
- 487
- Gaps:
- 4664
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGCGCGGACCGCGCATGCGCAGTGGGGACCGGCGTTTGAGTGGCAAGTTGTTTGTTACAGCGAACACCAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCCCGCGCCGGCACCCGCGCGCCGCTGCTCCGCCGGCGCTGCCTCCCTCGACCCGTGGCTCCCCCTCGCAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGGCGGGCCTCCTCCCTTTTGTCCGGCCCGGTCCGGCCGCCGCCGCCCCCCGCGCCTGGCGCCGAGCTCCCGG 222
Query 1 ---------------------------------------------------------------------ATGAG 5
|||||
Sbjct 223 GTCCCCGGGCCGGCTGTCGGTGCCGGCAGGGCGCGGAGGGGGCGGGGGCCGCGGCTCGTCCCCCAGCGGATGAG 296
Query 6 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 370
Query 80 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 444
Query 154 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 518
Query 228 CTCAGGGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 301
|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCGGAGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 592
Query 302 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 666
Query 376 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 740
Query 450 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTG---------------------------------- 489
||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTGTAGCAGCCGAGAACCTCGGCATCACCAGTGGCTT 814
Query 490 -------------------------------------------------------------------------- 489
Sbjct 815 CGTGAAGCCCAAGCTGGTCCAGATGCCGGTCATCCACCCACTGTCCAGCCCGAGCAACAGGTTCTGTGTCACCA 888
Query 490 -------------------------------------------------------------------------- 489
Sbjct 889 GCCTGGACCCCGACACGCTGCCTGCTGTTGCCACACTCCTCATGGATGTCATGTCCTACTTCAATGGGTGAGGA 962
Query 490 -------------------------------------------------------------------------- 489
Sbjct 963 TACAACTAGAAGCCAGCAGTCTACAGGCTGGAAGAAGGCCCTCACCAGAACCCAACCCTTGGACTTCAGCCTCC 1036
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1037 AGAACTGTGAGAAATACATACCTGCTGTTTGTAAGACACCAGTCTATGGAATTCTGTTACAGTAGCCTGAACTC 1110
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1111 AGACATAGCCCTTTTCCATTTATAAGGTGGTTTTACCTTATATTTTATGTAAAAGGTCCATTTTATTTATTTTT 1184
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1185 GAATTGTTGATTTTTTTTTAAGAGACACGTGTTTACTATGTTACCCAGGCTGGACTCCAACTCCTGGACTATTG 1258
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1259 ATCCTCCTGTCTCCACCTCCCGAGTTGCTGGAACTACAGGCTAACAGCTCTGTTTTAAAGATGAGAAAATGGGC 1332
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1333 CCCACGCAGTGGCTCACACCTGTAATCCCAGCACTTAGGGAGGCTGAGCCAGGTGGAGCCACTTGAGGTCAGGT 1406
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1407 GTTCGAGATTAGCCTGGCCAACATGGCAAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCATGA 1480
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1481 TGGCGCGTGCCTGTAATCCCAGCTACTTGGGAGTCTGAGGCAGGAGAATTGCTTGAGCCCAGGAGGCAGAGGTT 1554
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1555 GCAGTGAGCCGAGACTATGCCACTGCACTCCAGCCTAGGTGACAAAGAGAGACTCTACCTCAAAAAATAAAAAT 1628
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1629 AATTAAAAAATAAAGATGAGAAAATGGAGGCTGAGGAGGGGTAAAAGCGCTAACTTGACATGGAGTTGAGGACT 1702
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1703 AGCACTCATGTCACCTCACTCCAAATGCCAGGCTTTTCCCACTACACCAGCAGCAGTTCCTCCTGGGGAAACAG 1776
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1777 GCTAGGTTAGAAAGGGAGTGAGGGAAGGGACAGGGAGGGGAAGCCCTCTAGTAGGGAGATGGAGGATAGGGGGT 1850
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1851 CATGTTTTGTGGGGAGAGACACTGAAGGGGCTGCCACTTGGACTGAATGACCTCCCACCTCCAGCATTAGGACT 1924
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1925 CCTTCCAATTCCTAGGGGGTTCGGAGGCAACAATATTTATTTAGGGATTGGGAGCGAGAGTGCTATTCCAACCT 1998
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1999 TCTTTGGTATTTGTAATTTCTTTTCCTTATTCTTTAATAAAAGTAGAGTCCAAGCAAAGTCCAAACCAACATAT 2072
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2073 AACCTGTCCTCCTTTACTCTAGATTCATTCAGCTTTTCCAGACCAGGCATCACCGAGCGGAGAGAGGGGAAACA 2146
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2147 CCCTGGCTTCTCTTTGGCACATCAGCCCCTAGTTCTTGAGAGAGAAGGGCAGGGTGGTCTACTCACCATGTCTG 2220
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2221 TATCCTGCCGTTCTTCATTTGACTCATCCTGGATTTCTAACTCTTCTTCCTCGTCCTCTTCCATAAGGCTGAGT 2294
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2295 CTGATGTAGGGGCAAAGAGACTGGCTTTTCAAACTGTTCTTTGAGGACCCCTGAGAGTTTCTCAGACACCCGGG 2368
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2369 GTGGGGGAAGTGGGGAGCAGTAAGTACAGCATAGTAGTTTCCCGATTGTGCTGACAGGAAGTGCTCTGTGGCTA 2442
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2443 AAACAAGTCCAAAAAGCACCCACAGAGAGGCAATGGGTGAGACAGGAATCCCCTCACAGTGGGCGACAGATCTG 2516
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2517 AAGTGAAGACAGGAGATGATGAGAAAAGCTCACCGCATCAGCTGGTTGCCCAGGCCAGGACCTGAAGGGTTGTG 2590
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2591 TGGAGTCTGGAAATATTGTGGACCCAAGAACCTTGACCTCTCGGTGCCTGCGACGGGCTGACTGCTGGGAATGA 2664
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2665 AGCAGGATCAATGATGGGATAAAAATCAAGGGTAAGAAGAGGATGTAAGGCAGCTGGTGTTAATGGGGAGAAAA 2738
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2739 GCTCAGAGAGATGCATTTTAAAGCTAAACAATGGAGAAGGGTTTGAGAAGAACCCAACAATGTGGGAGTGCTAC 2812
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2813 AGCAGGGAACCATGAAACAGAAACAGCAAGATGGAGGCAGCCAGACACCAAACTGGGAACTCAGACACCCAGAT 2886
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2887 TCCCTCCATGGCCTCACCCCTGGGCAAAATCCAACTCTGAGCCATCTTCTTCCTCCATCTCTTTCAACCCCCAC 2960
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2961 AGGGGCTGCCTGCTCTTCACAGCTGTGGAGGTGAGGGTGGGCGTGGGCGGGATGCTGTTCAGCTGCAGACTTTC 3034
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3035 TTCCTGGGACGAGGAGACGTCCTCTCTGTTAGGCTTGGCAGGCCCTGCCAAGCAGATGCATACATTAACCACAG 3108
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3109 CCCAGGGCCTGCGACAGGTGTGCTCTCTTTCCAAGACCTGCCCAGGATTTAGTAAGGGAAAGTCAATCAGGAAG 3182
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3183 AGAATGGAAAACTTATACAGCTTCATTCTGTTGCCCTCAAATGGGCATAGCCCTATGTACTAAATACATAGCCC 3256
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3257 TATGTACCAAAAAGTAAGGCTTAGAGAATTGTAGCTAGGCCTTGTCCAAGAAGAACTTGCTACACAGCCTAGAA 3330
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3331 AACAAGATGGAAAGATATATAAATATACATTTCACAGATAAACTGTAACAGGTGAACAGGTGAACACAAACATG 3404
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3405 AGGGAGGGTTGGAGTCTCTAAGATTGAGAGGTCTGAGTTAGCCAATGAAGACATCTGAGATCCTATCCAAGATT 3478
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3479 TCTGTGGTCAGAAAAAGCTGTAAATGGCAATAGAGTTTTGGTACCAGAGGCTAGAGTGGACAAATGAGGGCCAG 3552
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3553 GGAGGAACCGGAAAATGGGAGACAGGATTTTCTAAAAGCTAGAAAAAAATGAAGTGATTGCAATGCCAGTATAA 3626
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3627 CTGATATGATATGAAGGGGGACTTATCTCCTGCAGAGATTGGAGAAGGTAGAGGAGGAGAAAGAATCCAAAGAT 3700
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3701 TCTCACTGCCTGAGAAAACCCAGGCAATACTATTTTAAAGCATCAGTCAAATTGACATTAACATCTGTTAACTG 3774
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3775 TAAACAGTCACACTCCCATTACCCCCCTTCTCCACTAAAAACAATAATCCCAAAGTGAGCGCTCAGCCTATGGG 3848
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3849 TTTAAGCAGAGGGCTACAGAAAACAGGGAAGAGACATACCCCTGGGCTTGGATTCCCAGAGAGGAAACCTTGGG 3922
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3923 GCCCCAGATGTGTCCTCCTGATCTCCCTGAGCTATTAATGGTGTGATGCCCGAGGGCTGGGCCCTTGAGTCTCT 3996
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3997 CCTCTTCTCCATCTTCACTGGCTTCCCCAGCCACTCACGTTCATGTCCTTAAATATCACCTATACTCTGCCACA 4070
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4071 TCCCAAAGGGATCTCAAGCCTTCAGCTCTCCCCTGAACTCCATCTTAACAGCCCCCATGGTTTGTTCAACATCT 4144
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4145 CCACCTGTAATCCTGTGGCCAACACCAATGCCCCAACCTTCCCCCACAGCTATCTTCACTCTCTGCCTTCCCCA 4218
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4219 TCTCAGATACTGTCAACTCCATCCTTCTGTCAGGCCAAAATCCTTGGAGCCATCCTCAACTGCTCTTTTTGTCT 4292
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4293 TACATCCCACATCCAGTTTGTCAGAAAAGCCTATTAGAGATACCTTGAAAATGCACCCAGAATCTGGCCGTTTC 4366
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4367 TCGGCACCTCCACCATTGCCCCCGGCCTAAGAAGCTCTCTTATCTTGCATCTTGGGCTGGACTCCTACAACAGC 4440
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4441 CACAACCTCCCTGCTGGTCTCCCAGCTTCTAGCCTTCCCCCATCTCCTGTCGTTTTCGACACAGCAGCCAGAAG 4514
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4515 GATCCTTTAAAAACAGAGGTTGATCCTGTCGTTCCTCAAAATCCTCCAATGGTTTTCCTACTGCACTCAGAGTA 4588
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4589 AAAGCCAGTCTCTGCCTTAGATGCTCTGGGATCCTGTACCCTCTTTGGTCTCATGTCCTACAATCTGCATTCTG 4662
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4663 GCCATAATGGTCTTCTCTGCTGTTCCTTGAACATTCCAGGAACATTCCCCCCATCCCCTCGTGGCCTCAGGACT 4736
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4737 GGCTGCTTCCTTTGGTATGCTATTCTGATACACACTAAGCACCCTCCCTCACCTGTTATAAAAAATTCGCTGGG 4810
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4811 AGGCCAATAGGCTGAAATGGCTCCTGCACTTTGGGTTCCTAAGTCAGCAAACTGAAACTCAACTCAGAGTGAAA 4884
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4885 GTGTTGTGTGTAACCTAGGAGCAGGAAACTTCAGCTTAACCAGTCAGAAACTACCGACTAACCTCTAACAAGAG 4958
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4959 ATTTATGGTCAGTTAACCTCTAAATATGAACTTTCCACTCTAACCAATCAAATAGTTTCTTTGTCTTGCTCCCA 5032
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5033 GAGACACCTTGTAAGTGTCCCCTCTGGTTTCCTCGGTGGTGGCGCCCTGAACTGCTGGCGGTCTGCCACTGCCT 5106
Query 490 ----------------------------------------------- 489
Sbjct 5107 GATTGATAAAATTGCTGAATGCTCAAATAAACCTGTTAAAATTGTAA 5153
