Nucleotide Global Alignment

Description

Query:
TRCN0000477141
Subject:
XR_001751417.1
Aligned Length:
4969
Identities:
1128
Gaps:
3841

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCTTTCCGGAGGCGGCCGCTCTGCGCCTCGGCGTTTCCTCCAAGGCTGCCCACCAGAAGGACCTGCCCGAGAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTAGAGGGCATAGGGTCAAGATCAAGATAAGGCAGCTCCAGCCCCTGGAAGGCCAGAGACTTGCCAGTGTCCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTAGCGGGCTCTTCGCAAGAATCCCCCCGGGCCCGCCGCAGCCAGGCGGCGGCCGGCAGAGGGCGCTGCTCGGG  222

Query    1  -ATGGCGGAGGAGCGGCCGGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGAGCTGGGCTCCGGAC  73
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CATGGCGGAGGAGCGGCCGGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGAGCTGGGCTCCGGAC  296

Query   74  GCGGGCGCCAGGTGCACAGCCCCAGTCCGCTGCGGGCGGGCGTCGACATCTGCCGCGTGAGCGCGAGCTGGAGC  147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCGGGCGCCAGGTGCACAGCCCCAGTCCGCTGCGGGCGGGCGTCGACATCTGCCGCGTGAGCGCGAGCTGGAGC  370

Query  148  TACACCGCTTTCGTGACCCGTGGAGGCCGCTTGGAGCTGTCGGGCTCAGCCAGCGGCGCGGCGGGCCGCTGCAA  221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TACACCGCTTTCGTGACCCGTGGAGGCCGCTTGGAGCTGTCGGGCTCAGCCAGCGGCGCGGCGGGCCGCTGCAA  444

Query  222  GGACGCGTGGGCCTCGGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCCGGGGCCGGAGGCGTTACTGCAGGTCT  295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGACGCGTGGGCCTCGGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCCGGGGCCGGAGGCGTTACTGCAGGTCT  518

Query  296  GGGCGGCCGAATCGGCGCTGCGTGGGGAGCCATTGTGGGCCCAGAATGTGGTGCCCGAGGCCGAAGGGGAAGAC  369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGGCGGCCGAATCGGCGCTGCGTGGGGAGCCATTGTGGGCCCAGAATGTGGTGCCCGAGGCCGAAGGGGAAGAC  592

Query  370  GATCCGGCCGGTGAGGCCCAGGCTGGGAGGCTACCCCTGCTGCCCTGCGCCCGTGCCTACGTGAGCCCGCGGGC  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GATCCGGCCGGTGAGGCCCAGGCTGGGAGGCTACCCCTGCTGCCCTGCGCCCGTGCCTACGTGAGCCCGCGGGC  666

Query  444  GCCCTTCTACCGGCCTCTGGCTCCGGAGCTGCGGGCACGCCAGCTGGAGCTGGGCGCCGAGCACGCGTTGCTGC  517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCCCTTCTACCGGCCTCTGGCTCCGGAGCTGCGGGCACGCCAGCTGGAGCTGGGCGCCGAGCACGCGTTGCTGC  740

Query  518  TGGACGCTGCTGGCCAGGTGTTCTCCTGGGGCGGGGGCAGGCATGGACAGCTGGGCCATGGGACCCTGGAGGCA  591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGGACGCTGCTGGCCAGGTGTTCTCCTGGGGCGGGGGCAGGCATGGACAGCTGGGCCATGGGACCCTGGAGGCA  814

Query  592  GAGCTGGAGCCACGGCTGTTGGAGGCGTTGCAGGGCCTAGTCATGGCTGAGGTGGCCGCGGGGGGCTGGCATTC  665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAGCTGGAGCCACGGCTGTTGGAGGCGTTGCAGGGCCTAGTCATGGCTGAGGTGGCCGCGGGGGGCTGGCATTC  888

Query  666  TGTGTGTGTGAGTGAGACTGGGGATATTTATATCTGGGGCTGGAATGAATCAGGGCAGCTGGCCCTGCCCACCA  739
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TGTGTGTGTGAGTGAGACTGGGGATATTTATATCTGGGGCTGGAATGAATCAGGGCAGCTGGCCCTGCCCACCA  962

Query  740  GGAACCTGGCAGAGGATGGAGAGACTGTCGCAAGGGAAGCCACAGAACTGAATGAAGATGGTTCTCAGGTGAAG  813
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGAACCTGGCAGAGGATGGAGAGACTGTCGCAAGGGAAGCCACAGAACTGAATGAAGATGGTTCTCAGGTGAAG  1036

Query  814  AGAACGGGTGGGGCTGAGGATGGAGCCCCTGCCCCCTTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCT  887
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGAACGGGTGGGGCTGAGGATGGAGCCCCTGCCCCCTTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCT  1110

Query  888  CCCCATGGGCTCAGATGCAGTCAAGGCCAGCTGTGGATCCCGGCACACAGCTGTGGTGACAC------------  949
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct 1111  CCCCATGGGCTCAGATGCAGTCAAGGCCAGCTGTGGATCCCGGCACACAGCTGTGGTGACACGTGAGTGGGGCT  1184

Query  950  --------------------------------------------------------------------------  949
                                                                                      
Sbjct 1185  GGGAGGCACTCTGCTCCACTCGAGCTGGTGCCTACGGAAGGGGGTGTGGTCGACGGAAAAACTTCTGTCTTAAG  1258

Query  950  --------------------------------------------------------------------------  949
                                                                                      
Sbjct 1259  GCTTCTGTGGCTCATACAGAGCAGCTACCTTGCTCAGTGGATAAGCCCCAACCCCCTTGTTGTTTCACAGTAGT  1332

Query  950  --------------------------------------------------------------------------  949
                                                                                      
Sbjct 1333  TCCCCAGCCTGTCAGGCCCAGAAGTTTCTTCCTTCTGGTGGGAGGCTGATGCTTTCTGTCCTCCCTGCACGGCC  1406

Query  950  --------------------------------------------------------------------------  949
                                                                                      
Sbjct 1407  ACAGACACATTCCCTGCCCGCCGCCGCCTCTGACAGCAGGGACTGTCCAGTCTGGCATGGAAGACTGCGGCGCT  1480

Query  950  --------------------------------------------------------------------------  949
                                                                                      
Sbjct 1481  CGGTAGCATGGCACACAGGAAGATCCGCCACTTTTTCCCTCGGGATCCTCTGCCATGCCACGTGTGATCAGCCA  1554

Query  950  --------------------------------------------------------------------------  949
                                                                                      
Sbjct 1555  GTTGTTAAGAGAATATGTTGTTCCATGCCAGGCAGATCTCATGAGGATTGTAATATGCTAGCTGTGGGCTGTGC  1628

Query  950  ----------------------------------------------------------------------GAAC  953
                                                                                  ||||
Sbjct 1629  CAAGCTGGGCTGGACAGATGCCTTGCCAAAGAACCGTAGTGACAACTATCGATTGTCCTTTTGCTTTCAGGAAC  1702

Query  954  AGGGGAGCTCTACACCTGGGGCTGGGGTAAATATGGACAGCTGGGCCACGAGGACACCACCAGCTTGGATCGGC  1027
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AGGGGAGCTCTACACCTGGGGCTGGGGTAAATATGGACAGCTGGGCCACGAGGACACCACCAGCTTGGATCGGC  1776

Query 1028  CTCGCCGTGTGGAATACTTTGTAGATAAGCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTGGAACACCTAC  1101
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CTCGCCGTGTGGAATACTTTGTAGATAAGCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTGGAACACCTAC  1850

Query 1102  GTGTATGCTGTGGAGAAAGGGAAGAGC-----------------------------------------------  1128
            |||||||||||||||||||||||||||                                               
Sbjct 1851  GTGTATGCTGTGGAGAAAGGGAAGAGCTGACATGTGTACGTATATGTATATGCAACACCTGTGAGACCCCCATT  1924

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 1925  CAGGTCAAGGAAAACCATTGCCTGCACCCCAAGGGCCCCATATTTGCCCCTCCCCATCACAGTCCTGCCCTTCA  1998

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 1999  CCCTCAAGCACGGTCCTAAACTTGTCTGCACTTTAGAAACACCTGGAGAGCATTGAAAACTCTGCTGCCTAAGG  2072

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2073  TCAGCATCAATCAAAACAATGAAATCAATGAAACAATGAAACCAGAGCTTCTAGGTGTGTGGCCTGGATAGTGG  2146

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2147  TAGATTCAAAGCTCCACCCACCTCATCCCAGGTACATTTGATGTGCAGCTGAGATTGGGGCACATTCCAGGTCA  2220

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2221  TCGTCTTCTGTCAGTCATTTCCCTGCTTTCGTTTGAATTTTACCATTCTTGTATGCAGCCTTATACGACATAGT  2294

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2295  TGTGTTTGCTTTTGAGTGTTAGATAAATGGAATCCTGTGTATGTGCTTTTGTGTCGTTTTTGTCACTCAGCATT  2368

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2369  GTATAATCCATCCTTGTTGGGTCCTGGAGTTCATTTTTAATGCTATATGGTGTTCTGTTGTATGAATAATACCT  2442

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2443  CAAGTGATACAGCCTTGTTGATGGTCATTTTTATTGTTTCTGATTTTGGTCATTCCACATAATTCTTTGTGCAG  2516

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2517  TCTTCTGCACATGTGCACAAGTTCCTTTGCAGAACATTGAGTTGAATTGCTAAGTCAGGAGATACCTTTAATTT  2590

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2591  TACTAGATAACTGTTGCCCCCAGCAGGGTGGGGTCTACTGTGGCTAAAATGTCAGGTAGATGCACACTGGTTTT  2664

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2665  AATTGGCATTTCCCTGGATACTGATGAGGTTGAGTAGCTTTTCATTTGTTTTGGATGGCTGGGCATGGTGGCTC  2738

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2739  ACACCTGTAGTCCCAGCACTTTGGGAGGCTAAGCAGGGAGATTGCTTGAGGCGAAGAGTTCATATGTTTATTGG  2812

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2813  CCACTTGGAGTTTTTCTGTTGTCAAGTGCCTGTTCAAGTTTTCTGGCCTTTTAAAATGTTCTGTATTTTCCTTA  2886

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2887  GTGATTTTTCTTTTGGATATTTCAGATACAAGTCTTTTGAGAGTTAGTATTCAGAGTATCTTCTGCTACAATGT  2960

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 2961  AGTTTGTTTCAGTCTCTCTTGGTATTACCAATTTTAATACTTAGGTGATGCTTACTCCATGCCAGGTAAGGCTC  3034

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3035  AAAGTGCTTTACAAGTATCAACTTATTTTGATAAAATAAGCTTATCAGTAGTTTTCTTTATAGTTAAATTCTAT  3108

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3109  TTGTGCATGTGTGTGTCTGTGGTTTAGCAAATGTTTCCCACCCATGGGGTCTTTTTTATTGTGGTAAAATATAC  3182

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3183  TGAACATAAAATTTATGTTCAATAAAAAACAAAAATTGTTTTTAACCATTTTAAGTACATAGTTCAGTGACATT  3256

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3257  ATATGCATTCACTGTTGTGCAACCGTCACCCCTATGCATTTCCAGAACTTTTTCATCATTCTATGCTGAAACTC  3330

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3331  TGTGCATTAAACACTTAACTCGTCAGTCTCCCCTTCCCCAGCCCCAGGCAACCACAGTCCTAACCTTCTGTTCC  3404

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3405  TATGATACTGTAAGTGCCTCATGTAAGTGAAATCCCATAGTATTTGTCTTTTTATGACTGGCTTATCTCACTTA  3478

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3479  GCAGCATGTCCTCCAAGTTCATCCATGATGTAGCTTATGTATCTAGACTTCCTGCCTTTTAAAGGCTAAGATTC  3552

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3553  TGTTGTATGTATACACTGCGTTTTATTCATCCGTGCATTGGTGGATATCTGAGTTGTTCACTACAGTCAATAAT  3626

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3627  GTTGCTGGGAACATGGGTGTACAACTCTCTTGAGTCTCTGCTTTCAGTTCTTTTGGATATATACCCAGAGTGGA  3700

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3701  ATTGCTGGATTGTGTGGTAATTCTAAATTTTTTTGAGGAACTGCCCTGTTTCCCACAGAGGCTGCATCATTTTA  3774

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3775  CATCCCCACTGGAAGTGCACACAAATCCTAATTTCTCCACATCCGCGTCCACACTTGTTTTCTATTTCTGGTTA  3848

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3849  ACAGCCATCCTAATGGGTGTGAAGTGGTATTTCATTGTGGGTTTTTTTTTTTTTTTTTGGACAGGGTCTCTCTG  3922

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3923  TTGTCCAGGCTGGAGTACAGCCTCCACCTTCTGGGCTTAAGCCATCCTCCCGGGTAGCTGGGGCTACAGGCACG  3996

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 3997  TGCCACCACATCTGGCTAGTTTTTTGTATTTTTAGTAGAGATGGGGTTGTTGCATATTGCCCAGGCTGGTCTCA  4070

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4071  AACTGCTGGGCTGAAGCGATCCACTTGCCTTAGCCTCCCAAAGTACTAGGATTATAGGCATGAGCCATCATGCC  4144

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4145  TGGCCAAGCCATTTTTTAAAATGGACAAAAGTCAACAAAGACGACAGAAGGATAGCAAGTGAGCATATGAGAAG  4218

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4219  ATGCTCTACATCATTAGTCATTAGGGAGTTGTAAATGAAAACCATAGTGAGACACCACTCCATACACAGAATAA  4292

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4293  CTAGAATTACATAAAGGCTGAACATACCAACTGTTGGTGAAGATGTGGAGAAACTGGAACCTTCATACATTACT  4366

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4367  GGTAGGAATGTAAAATGGTACAACTGCTTTGGAAAACAGTTTGGCATTTCTTCTTTTTTAAGATGGAGTCTTGC  4440

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4441  TCTGTTGCCCAGGCTAGAGTGCAGTGGTGCAATCTCAGCTCACTGCCACTTCCGCCTCCTGAGTTCAAGGAATT  4514

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4515  CTCCTTCCTCAGCCTCCTGAATAGCTGAGATTACAGGTGTGTGCCACCACAGCCAGCTAATTTTTGTATTTTTA  4588

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4589  GTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCGTGATCTGCCCACCTTAGCCT  4662

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4663  CCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCGGCCCAGTTTGGCATTTCTTAAAAAGTTAAGTGTA  4736

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4737  CACATACCATAGATGTGATCCAGCCATTTCACTCCTAGGTATTTATCCAGAAAAAAAAATATATCCATACAAAG  4810

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4811  ACTTGTACATGAATGTTTATAACAGCCTTGTTTTTAATAGCCAAAAACTGGAGAAAAGCCAAATGTGAAAAATA  4884

Query 1129  --------------------------------------------------------------------------  1128
                                                                                      
Sbjct 4885  AACCTAACAGGCGAATAAACTGGTATATCAACACCATGGAATACTAAGCAAAAAAAAAAAAAAAAAAAAAAAAA  4958

Query 1129  -----------  1128
                       
Sbjct 4959  AAAAAAAAAAA  4969

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