Nucleotide Global Alignment
Description
- Query:
- TRCN0000477141
- Subject:
- XR_001751417.1
- Aligned Length:
- 4969
- Identities:
- 1128
- Gaps:
- 3841
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCTTTCCGGAGGCGGCCGCTCTGCGCCTCGGCGTTTCCTCCAAGGCTGCCCACCAGAAGGACCTGCCCGAGAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTAGAGGGCATAGGGTCAAGATCAAGATAAGGCAGCTCCAGCCCCTGGAAGGCCAGAGACTTGCCAGTGTCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTAGCGGGCTCTTCGCAAGAATCCCCCCGGGCCCGCCGCAGCCAGGCGGCGGCCGGCAGAGGGCGCTGCTCGGG 222
Query 1 -ATGGCGGAGGAGCGGCCGGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGAGCTGGGCTCCGGAC 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATGGCGGAGGAGCGGCCGGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGAGCTGGGCTCCGGAC 296
Query 74 GCGGGCGCCAGGTGCACAGCCCCAGTCCGCTGCGGGCGGGCGTCGACATCTGCCGCGTGAGCGCGAGCTGGAGC 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCGGGCGCCAGGTGCACAGCCCCAGTCCGCTGCGGGCGGGCGTCGACATCTGCCGCGTGAGCGCGAGCTGGAGC 370
Query 148 TACACCGCTTTCGTGACCCGTGGAGGCCGCTTGGAGCTGTCGGGCTCAGCCAGCGGCGCGGCGGGCCGCTGCAA 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TACACCGCTTTCGTGACCCGTGGAGGCCGCTTGGAGCTGTCGGGCTCAGCCAGCGGCGCGGCGGGCCGCTGCAA 444
Query 222 GGACGCGTGGGCCTCGGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCCGGGGCCGGAGGCGTTACTGCAGGTCT 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGACGCGTGGGCCTCGGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCCGGGGCCGGAGGCGTTACTGCAGGTCT 518
Query 296 GGGCGGCCGAATCGGCGCTGCGTGGGGAGCCATTGTGGGCCCAGAATGTGGTGCCCGAGGCCGAAGGGGAAGAC 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGGCGGCCGAATCGGCGCTGCGTGGGGAGCCATTGTGGGCCCAGAATGTGGTGCCCGAGGCCGAAGGGGAAGAC 592
Query 370 GATCCGGCCGGTGAGGCCCAGGCTGGGAGGCTACCCCTGCTGCCCTGCGCCCGTGCCTACGTGAGCCCGCGGGC 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GATCCGGCCGGTGAGGCCCAGGCTGGGAGGCTACCCCTGCTGCCCTGCGCCCGTGCCTACGTGAGCCCGCGGGC 666
Query 444 GCCCTTCTACCGGCCTCTGGCTCCGGAGCTGCGGGCACGCCAGCTGGAGCTGGGCGCCGAGCACGCGTTGCTGC 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCCCTTCTACCGGCCTCTGGCTCCGGAGCTGCGGGCACGCCAGCTGGAGCTGGGCGCCGAGCACGCGTTGCTGC 740
Query 518 TGGACGCTGCTGGCCAGGTGTTCTCCTGGGGCGGGGGCAGGCATGGACAGCTGGGCCATGGGACCCTGGAGGCA 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGACGCTGCTGGCCAGGTGTTCTCCTGGGGCGGGGGCAGGCATGGACAGCTGGGCCATGGGACCCTGGAGGCA 814
Query 592 GAGCTGGAGCCACGGCTGTTGGAGGCGTTGCAGGGCCTAGTCATGGCTGAGGTGGCCGCGGGGGGCTGGCATTC 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAGCTGGAGCCACGGCTGTTGGAGGCGTTGCAGGGCCTAGTCATGGCTGAGGTGGCCGCGGGGGGCTGGCATTC 888
Query 666 TGTGTGTGTGAGTGAGACTGGGGATATTTATATCTGGGGCTGGAATGAATCAGGGCAGCTGGCCCTGCCCACCA 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGTGTGTGTGAGTGAGACTGGGGATATTTATATCTGGGGCTGGAATGAATCAGGGCAGCTGGCCCTGCCCACCA 962
Query 740 GGAACCTGGCAGAGGATGGAGAGACTGTCGCAAGGGAAGCCACAGAACTGAATGAAGATGGTTCTCAGGTGAAG 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGAACCTGGCAGAGGATGGAGAGACTGTCGCAAGGGAAGCCACAGAACTGAATGAAGATGGTTCTCAGGTGAAG 1036
Query 814 AGAACGGGTGGGGCTGAGGATGGAGCCCCTGCCCCCTTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCT 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGAACGGGTGGGGCTGAGGATGGAGCCCCTGCCCCCTTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCT 1110
Query 888 CCCCATGGGCTCAGATGCAGTCAAGGCCAGCTGTGGATCCCGGCACACAGCTGTGGTGACAC------------ 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCCCATGGGCTCAGATGCAGTCAAGGCCAGCTGTGGATCCCGGCACACAGCTGTGGTGACACGTGAGTGGGGCT 1184
Query 950 -------------------------------------------------------------------------- 949
Sbjct 1185 GGGAGGCACTCTGCTCCACTCGAGCTGGTGCCTACGGAAGGGGGTGTGGTCGACGGAAAAACTTCTGTCTTAAG 1258
Query 950 -------------------------------------------------------------------------- 949
Sbjct 1259 GCTTCTGTGGCTCATACAGAGCAGCTACCTTGCTCAGTGGATAAGCCCCAACCCCCTTGTTGTTTCACAGTAGT 1332
Query 950 -------------------------------------------------------------------------- 949
Sbjct 1333 TCCCCAGCCTGTCAGGCCCAGAAGTTTCTTCCTTCTGGTGGGAGGCTGATGCTTTCTGTCCTCCCTGCACGGCC 1406
Query 950 -------------------------------------------------------------------------- 949
Sbjct 1407 ACAGACACATTCCCTGCCCGCCGCCGCCTCTGACAGCAGGGACTGTCCAGTCTGGCATGGAAGACTGCGGCGCT 1480
Query 950 -------------------------------------------------------------------------- 949
Sbjct 1481 CGGTAGCATGGCACACAGGAAGATCCGCCACTTTTTCCCTCGGGATCCTCTGCCATGCCACGTGTGATCAGCCA 1554
Query 950 -------------------------------------------------------------------------- 949
Sbjct 1555 GTTGTTAAGAGAATATGTTGTTCCATGCCAGGCAGATCTCATGAGGATTGTAATATGCTAGCTGTGGGCTGTGC 1628
Query 950 ----------------------------------------------------------------------GAAC 953
||||
Sbjct 1629 CAAGCTGGGCTGGACAGATGCCTTGCCAAAGAACCGTAGTGACAACTATCGATTGTCCTTTTGCTTTCAGGAAC 1702
Query 954 AGGGGAGCTCTACACCTGGGGCTGGGGTAAATATGGACAGCTGGGCCACGAGGACACCACCAGCTTGGATCGGC 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGGGGAGCTCTACACCTGGGGCTGGGGTAAATATGGACAGCTGGGCCACGAGGACACCACCAGCTTGGATCGGC 1776
Query 1028 CTCGCCGTGTGGAATACTTTGTAGATAAGCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTGGAACACCTAC 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTCGCCGTGTGGAATACTTTGTAGATAAGCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTGGAACACCTAC 1850
Query 1102 GTGTATGCTGTGGAGAAAGGGAAGAGC----------------------------------------------- 1128
|||||||||||||||||||||||||||
Sbjct 1851 GTGTATGCTGTGGAGAAAGGGAAGAGCTGACATGTGTACGTATATGTATATGCAACACCTGTGAGACCCCCATT 1924
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1925 CAGGTCAAGGAAAACCATTGCCTGCACCCCAAGGGCCCCATATTTGCCCCTCCCCATCACAGTCCTGCCCTTCA 1998
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1999 CCCTCAAGCACGGTCCTAAACTTGTCTGCACTTTAGAAACACCTGGAGAGCATTGAAAACTCTGCTGCCTAAGG 2072
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2073 TCAGCATCAATCAAAACAATGAAATCAATGAAACAATGAAACCAGAGCTTCTAGGTGTGTGGCCTGGATAGTGG 2146
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2147 TAGATTCAAAGCTCCACCCACCTCATCCCAGGTACATTTGATGTGCAGCTGAGATTGGGGCACATTCCAGGTCA 2220
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2221 TCGTCTTCTGTCAGTCATTTCCCTGCTTTCGTTTGAATTTTACCATTCTTGTATGCAGCCTTATACGACATAGT 2294
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2295 TGTGTTTGCTTTTGAGTGTTAGATAAATGGAATCCTGTGTATGTGCTTTTGTGTCGTTTTTGTCACTCAGCATT 2368
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2369 GTATAATCCATCCTTGTTGGGTCCTGGAGTTCATTTTTAATGCTATATGGTGTTCTGTTGTATGAATAATACCT 2442
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2443 CAAGTGATACAGCCTTGTTGATGGTCATTTTTATTGTTTCTGATTTTGGTCATTCCACATAATTCTTTGTGCAG 2516
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2517 TCTTCTGCACATGTGCACAAGTTCCTTTGCAGAACATTGAGTTGAATTGCTAAGTCAGGAGATACCTTTAATTT 2590
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2591 TACTAGATAACTGTTGCCCCCAGCAGGGTGGGGTCTACTGTGGCTAAAATGTCAGGTAGATGCACACTGGTTTT 2664
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2665 AATTGGCATTTCCCTGGATACTGATGAGGTTGAGTAGCTTTTCATTTGTTTTGGATGGCTGGGCATGGTGGCTC 2738
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2739 ACACCTGTAGTCCCAGCACTTTGGGAGGCTAAGCAGGGAGATTGCTTGAGGCGAAGAGTTCATATGTTTATTGG 2812
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2813 CCACTTGGAGTTTTTCTGTTGTCAAGTGCCTGTTCAAGTTTTCTGGCCTTTTAAAATGTTCTGTATTTTCCTTA 2886
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2887 GTGATTTTTCTTTTGGATATTTCAGATACAAGTCTTTTGAGAGTTAGTATTCAGAGTATCTTCTGCTACAATGT 2960
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2961 AGTTTGTTTCAGTCTCTCTTGGTATTACCAATTTTAATACTTAGGTGATGCTTACTCCATGCCAGGTAAGGCTC 3034
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3035 AAAGTGCTTTACAAGTATCAACTTATTTTGATAAAATAAGCTTATCAGTAGTTTTCTTTATAGTTAAATTCTAT 3108
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3109 TTGTGCATGTGTGTGTCTGTGGTTTAGCAAATGTTTCCCACCCATGGGGTCTTTTTTATTGTGGTAAAATATAC 3182
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3183 TGAACATAAAATTTATGTTCAATAAAAAACAAAAATTGTTTTTAACCATTTTAAGTACATAGTTCAGTGACATT 3256
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3257 ATATGCATTCACTGTTGTGCAACCGTCACCCCTATGCATTTCCAGAACTTTTTCATCATTCTATGCTGAAACTC 3330
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3331 TGTGCATTAAACACTTAACTCGTCAGTCTCCCCTTCCCCAGCCCCAGGCAACCACAGTCCTAACCTTCTGTTCC 3404
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3405 TATGATACTGTAAGTGCCTCATGTAAGTGAAATCCCATAGTATTTGTCTTTTTATGACTGGCTTATCTCACTTA 3478
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3479 GCAGCATGTCCTCCAAGTTCATCCATGATGTAGCTTATGTATCTAGACTTCCTGCCTTTTAAAGGCTAAGATTC 3552
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3553 TGTTGTATGTATACACTGCGTTTTATTCATCCGTGCATTGGTGGATATCTGAGTTGTTCACTACAGTCAATAAT 3626
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3627 GTTGCTGGGAACATGGGTGTACAACTCTCTTGAGTCTCTGCTTTCAGTTCTTTTGGATATATACCCAGAGTGGA 3700
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3701 ATTGCTGGATTGTGTGGTAATTCTAAATTTTTTTGAGGAACTGCCCTGTTTCCCACAGAGGCTGCATCATTTTA 3774
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3775 CATCCCCACTGGAAGTGCACACAAATCCTAATTTCTCCACATCCGCGTCCACACTTGTTTTCTATTTCTGGTTA 3848
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3849 ACAGCCATCCTAATGGGTGTGAAGTGGTATTTCATTGTGGGTTTTTTTTTTTTTTTTTGGACAGGGTCTCTCTG 3922
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3923 TTGTCCAGGCTGGAGTACAGCCTCCACCTTCTGGGCTTAAGCCATCCTCCCGGGTAGCTGGGGCTACAGGCACG 3996
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 3997 TGCCACCACATCTGGCTAGTTTTTTGTATTTTTAGTAGAGATGGGGTTGTTGCATATTGCCCAGGCTGGTCTCA 4070
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4071 AACTGCTGGGCTGAAGCGATCCACTTGCCTTAGCCTCCCAAAGTACTAGGATTATAGGCATGAGCCATCATGCC 4144
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4145 TGGCCAAGCCATTTTTTAAAATGGACAAAAGTCAACAAAGACGACAGAAGGATAGCAAGTGAGCATATGAGAAG 4218
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4219 ATGCTCTACATCATTAGTCATTAGGGAGTTGTAAATGAAAACCATAGTGAGACACCACTCCATACACAGAATAA 4292
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4293 CTAGAATTACATAAAGGCTGAACATACCAACTGTTGGTGAAGATGTGGAGAAACTGGAACCTTCATACATTACT 4366
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4367 GGTAGGAATGTAAAATGGTACAACTGCTTTGGAAAACAGTTTGGCATTTCTTCTTTTTTAAGATGGAGTCTTGC 4440
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4441 TCTGTTGCCCAGGCTAGAGTGCAGTGGTGCAATCTCAGCTCACTGCCACTTCCGCCTCCTGAGTTCAAGGAATT 4514
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4515 CTCCTTCCTCAGCCTCCTGAATAGCTGAGATTACAGGTGTGTGCCACCACAGCCAGCTAATTTTTGTATTTTTA 4588
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4589 GTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCGTGATCTGCCCACCTTAGCCT 4662
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4663 CCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCGGCCCAGTTTGGCATTTCTTAAAAAGTTAAGTGTA 4736
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4737 CACATACCATAGATGTGATCCAGCCATTTCACTCCTAGGTATTTATCCAGAAAAAAAAATATATCCATACAAAG 4810
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4811 ACTTGTACATGAATGTTTATAACAGCCTTGTTTTTAATAGCCAAAAACTGGAGAAAAGCCAAATGTGAAAAATA 4884
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 4885 AACCTAACAGGCGAATAAACTGGTATATCAACACCATGGAATACTAAGCAAAAAAAAAAAAAAAAAAAAAAAAA 4958
Query 1129 ----------- 1128
Sbjct 4959 AAAAAAAAAAA 4969
